Njan015831.1
Basic Information
- Insect
- Noctua janthina
- Gene Symbol
- retn
- Assembly
- GCA_963576755.1
- Location
- OY755066.1:6388145-6395168[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-20 1.9e-16 60.9 0.0 16 89 25 96 13 96 0.94 2 2 4.7 1.2e+04 -2.6 0.0 25 38 223 236 185 237 0.59
Sequence Information
- Coding Sequence
- ATGTGTGATGAGACTCTGAATGATAAATTGAGGCATGAGATTATACGAGAACGTTGtggtttaaaagaagatgtagGCACTCCAATTAACCGTCTACCAATAATGGCGAAGTCGGTGCTAGACCTGTACGAGCTGTACAATCTGGTGATAGCCCGCGGTGGACTTGTGGAGGTCATTAACAAAAAGCTGTGGCAGGAGATCATCAAGGGGCTGCGTTTGCCGTCGTCCATcacttctgctgccttcacgtTGCGCACTCAGTACATGAAATATCTGTATGATTACGAGTGCGAAAAGAAAAATTTATCAACCAGAAGTGAGCTGGACGCAGCTATTGAGGGCAACAAGCGTGAGGGTCGCCGCGCCTCAGGACAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAATCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCGCTGTCGCTGGGGGGCGTGGCCTCGCGCCTGCCGCCACTGCCGCCGCACGCGTCTCATCTAGCGCAGCACGACATAGAGTACAGGGTGCGCGAGTATATGAAAATGATACACAACCAGAGGGATACTGTCCGAAATGgCTCGGAATCACCCCCCACCAACGGCCATATGCCAATAATGTCACCCCGCGAGGCCGCTCTCAGTGCCATCGATGTTTCCCGCCTCACCCTCTGGTCGCTgtacaacaacaataataacagcccacTACCGGACCTTGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGCTCAGTCACGGCGCCAAGCGCGAGGCGTGCCGCTCGCCGCTGCCGCCCGCCAAGCGCCGCACGCCCGCGTCCCGCCCCGTCTCGCCCCGCGACCACCTGCAATCGCCGCCTCAGCATCGCCACAGCCGCCGGGACGCCACGTCACCGCCACAGATCAACGGCGTGCCCAATACTAATGGTGTGAATGGAGCTGCCTTCAAGATTACCACCAGAGGAGACGCAAGCACAGGAGACCAGCAACTAGTTGTGTCTATAGAGCTGAACGGAGTAACGTACGAAGGTGTACTCTTCCCATCAGGCAACAGTCAGAACGGACACAGACAACTGGTGTCCTAA
- Protein Sequence
- MCDETLNDKLRHEIIRERCGLKEDVGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVASRLPPLPPHASHLAQHDIEYRVREYMKMIHNQRDTVRNGSESPPTNGHMPIMSPREAALSAIDVSRLTLWSLYNNNNNSPLPDLEPQREALNLSESPNSLSHGAKREACRSPLPPAKRRTPASRPVSPRDHLQSPPQHRHSRRDATSPPQINGVPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNSQNGHRQLVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -