Basic Information

Insect: Nineta flava
Gene Symbol: -
Assembly: GCA_963920215.1
Location: OY986041.1:51343354-51344964[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 8.9 1.5e+04 -3.3 0.2 15 23 51 59 47 60 0.71

2 15 0.098 1.6e+02 2.9 0.3 14 24 67 77 63 80 0.87

3 15 0.013 21 5.8 0.5 18 30 107 119 96 126 0.75

4 15 0.00016 0.27 11.8 0.7 13 40 130 154 122 157 0.84

5 15 0.015 25 5.5 0.9 15 28 188 201 175 212 0.77

6 15 0.0019 3.2 8.4 2.3 15 31 216 232 207 241 0.79

7 15 0.01 17 6.1 0.3 17 38 246 264 238 269 0.86

8 15 1.8 3e+03 -1.1 0.1 18 29 275 286 271 296 0.80

9 15 0.078 1.3e+02 3.3 0.3 14 29 299 314 289 328 0.75

10 15 0.029 48 4.6 0.2 17 30 330 343 320 349 0.83

11 15 0.065 1.1e+02 3.5 0.1 18 35 359 373 346 377 0.79

12 15 0.015 25 5.6 0.1 18 38 400 417 392 421 0.88

13 15 0.11 1.9e+02 2.7 0.2 14 30 438 454 429 459 0.77

14 15 0.0022 3.6 8.2 0.8 17 38 469 487 458 491 0.80

15 15 0.0026 4.3 8.0 1.6 18 38 498 515 490 520 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	8.9	1.5e+04	-3.3	0.2	15	23	51	59	47	60	0.71
2	15	0.098	1.6e+02	2.9	0.3	14	24	67	77	63	80	0.87
3	15	0.013	21	5.8	0.5	18	30	107	119	96	126	0.75
4	15	0.00016	0.27	11.8	0.7	13	40	130	154	122	157	0.84
5	15	0.015	25	5.5	0.9	15	28	188	201	175	212	0.77
6	15	0.0019	3.2	8.4	2.3	15	31	216	232	207	241	0.79
7	15	0.01	17	6.1	0.3	17	38	246	264	238	269	0.86
8	15	1.8	3e+03	-1.1	0.1	18	29	275	286	271	296	0.80
9	15	0.078	1.3e+02	3.3	0.3	14	29	299	314	289	328	0.75
10	15	0.029	48	4.6	0.2	17	30	330	343	320	349	0.83
11	15	0.065	1.1e+02	3.5	0.1	18	35	359	373	346	377	0.79
12	15	0.015	25	5.6	0.1	18	38	400	417	392	421	0.88
13	15	0.11	1.9e+02	2.7	0.2	14	30	438	454	429	459	0.77
14	15	0.0022	3.6	8.2	0.8	17	38	469	487	458	491	0.80
15	15	0.0026	4.3	8.0	1.6	18	38	498	515	490	520	0.89

Sequence Information

Coding Sequence: ATGTCAAATACTATAAcagatataaatgaaaataaatatttagaggAAAGTAACAATAGCAATACAGAAATACAACAACAGTTCCCTGTCGAAATAATAATCAAAGAAGAAATTGAAAGTGAAGATGAAAGTGTGGCACAAATATCACAAACACAACGAAAGTGCGGAGTGTGCAATACtttaaatgaaaacaatttaaaaacaaattggaCATGTACCATATGTAACGATCAAAATATGGAAATTAGACACAGAACTCGAAGTGAAACACgaacaaaaattgaaccagaaaaatatgaaattagaGAAAAAccacatttatgtaatatatgtgGAAAATCATTTAAAGAACGTGGTACATTGACCAGGCATGAAAAGGTACATACTGAAGAAAAACCGTATCAATGTAATATATGTGGAAAATTCTTTTCACAGCAAAGTAATTTAAATCGACACGTACGAGTGcacacgggagaaaaaccttttttatgTTGTGTATGTAGCAAATCATTTCCCACACAAGATCATTTAACTCGGCATGAACGTACACATACCGGTGAAAAACCCTATCATTGTAAATATtgtgaaaaatcattttcacaACCGACAAGTTTAAATGTCCACGaaagaattcatactggagaaaagccTTACAAGTGTGGTATATGTGgtaaaacattttctataaaaaataactGTTTAAGTCATGAACGATTACATAATGGTGAAAAACCATATCAATGCAATATATGTTTTAAGACATTTCCCATACAAAGTAATTTAACACGACATGAACGGACCCATAATGGCGAAAAACCATTTCAATGTGTAATGTGTGGTCGAGGTTTTTCACAGCGTGAGGCATTAACAAAACATGAAAGAATTCATACAGGTGAAAAACCTTATGTGTGTACACTATGCGGTAAGTCGTTTACACAACCAGGTAGCTTAACTGTACATATAAGGACTCATACGGGACAAAAACCGTATCAATGTCGTCTCTGTGATAAAGCATTTTCTCAACAAAATAGCTTACATGTACATGAAAGAATACATACTGGAGCAAAACCTTATCAATGTGATTTATGTGATAAAGCGTTTTCACAATCAACAACACTAGCTAAGCATAAAGAAAATCATGATAAACCTCAAATAGATATTGATAATGACCTAATTGAAATTGAAGTAAAACCACATCAATGTGGCGTGTGTGGAAAGTCATTTGCCGGAAAAACATCTTTGATTCGACATGAACGATTTCAcgatttatattcaataaaaaataattttatcgattcaaataaatataaacaccGGCCCTTTCAATGTCAAATTTGTTTCAAAGCATTTTCTGAAAAAGGTTCGTTAGTTCGACATGAAATTATTCATACGAATGAACGACCTTTTCAGTGTAAAATTTGTGGTAAAGGTTTTTCCCAACAAAGTAATTTAAATAGGCATAATATGACGCATACTGGTGAAAAACCGTATCATTGTACAATTTGCCGTAAAGCATTTTCACGTTTAAGTAATTTAAGTCGTCATGAAACTGtacataatagaaaaaaaattatggtgaTATCTCCTCCAATTCAAATTGATTCCGATTAA
Protein Sequence: MSNTITDINENKYLEESNNSNTEIQQQFPVEIIIKEEIESEDESVAQISQTQRKCGVCNTLNENNLKTNWTCTICNDQNMEIRHRTRSETRTKIEPEKYEIREKPHLCNICGKSFKERGTLTRHEKVHTEEKPYQCNICGKFFSQQSNLNRHVRVHTGEKPFLCCVCSKSFPTQDHLTRHERTHTGEKPYHCKYCEKSFSQPTSLNVHERIHTGEKPYKCGICGKTFSIKNNCLSHERLHNGEKPYQCNICFKTFPIQSNLTRHERTHNGEKPFQCVMCGRGFSQREALTKHERIHTGEKPYVCTLCGKSFTQPGSLTVHIRTHTGQKPYQCRLCDKAFSQQNSLHVHERIHTGAKPYQCDLCDKAFSQSTTLAKHKENHDKPQIDIDNDLIEIEVKPHQCGVCGKSFAGKTSLIRHERFHDLYSIKNNFIDSNKYKHRPFQCQICFKAFSEKGSLVRHEIIHTNERPFQCKICGKGFSQQSNLNRHNMTHTGEKPYHCTICRKAFSRLSNLSRHETVHNRKKIMVISPPIQIDSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00332757;
90% Identity: iTF_01060906;
80% Identity: iTF_01060906;