Basic Information

Insect: Netelia virgata
Gene Symbol: ZNF236
Assembly: GCA_951802705.1
Location: OX637868.1:3238490-3244250[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.00017 0.015 15.9 2.5 2 23 53 74 53 74 0.98

2 23 2e-08 1.6e-06 28.4 1.9 1 23 93 115 93 115 0.99

3 23 7.8e-05 0.0066 17.0 0.7 1 20 121 140 121 143 0.94

4 23 1.8e-05 0.0015 19.0 1.3 1 23 149 172 149 172 0.97

5 23 0.0014 0.12 13.1 2.8 1 23 181 204 181 204 0.98

6 23 1.1e-06 9.6e-05 22.8 2.8 1 23 318 340 318 340 0.98

7 23 0.00026 0.022 15.4 2.2 1 23 346 368 346 368 0.99

8 23 0.00063 0.053 14.2 5.0 1 23 374 396 374 396 0.98

9 23 1.5e-07 1.3e-05 25.6 2.3 1 23 400 422 400 422 0.98

10 23 0.001 0.084 13.5 2.9 1 23 477 499 477 499 0.98

11 23 6.1e-06 0.00051 20.5 3.8 1 23 505 527 505 527 0.99

12 23 4.4e-05 0.0037 17.8 1.2 1 23 533 555 533 555 0.98

13 23 9.8e-05 0.0082 16.7 7.2 1 23 561 583 561 583 0.98

14 23 0.027 2.2 9.1 3.3 2 23 924 945 923 945 0.97

15 23 0.00068 0.057 14.1 5.0 1 23 951 973 951 973 0.98

16 23 1 85 4.1 0.0 2 23 980 1001 979 1001 0.96

17 23 7.7e-07 6.5e-05 23.3 1.3 2 23 1068 1089 1067 1089 0.98

18 23 0.036 3.1 8.6 5.8 1 23 1095 1117 1095 1117 0.98

19 23 0.001 0.088 13.5 3.9 1 23 1123 1145 1123 1145 0.97

20 23 0.00027 0.023 15.3 2.2 1 23 1151 1173 1151 1173 0.98

21 23 0.0004 0.034 14.8 1.6 2 23 1396 1417 1395 1417 0.97

22 23 2.2e-05 0.0018 18.8 3.3 1 23 1423 1445 1423 1445 0.98

23 23 5.7e-07 4.8e-05 23.7 3.0 1 23 1451 1474 1451 1474 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.00017	0.015	15.9	2.5	2	23	53	74	53	74	0.98
2	23	2e-08	1.6e-06	28.4	1.9	1	23	93	115	93	115	0.99
3	23	7.8e-05	0.0066	17.0	0.7	1	20	121	140	121	143	0.94
4	23	1.8e-05	0.0015	19.0	1.3	1	23	149	172	149	172	0.97
5	23	0.0014	0.12	13.1	2.8	1	23	181	204	181	204	0.98
6	23	1.1e-06	9.6e-05	22.8	2.8	1	23	318	340	318	340	0.98
7	23	0.00026	0.022	15.4	2.2	1	23	346	368	346	368	0.99
8	23	0.00063	0.053	14.2	5.0	1	23	374	396	374	396	0.98
9	23	1.5e-07	1.3e-05	25.6	2.3	1	23	400	422	400	422	0.98
10	23	0.001	0.084	13.5	2.9	1	23	477	499	477	499	0.98
11	23	6.1e-06	0.00051	20.5	3.8	1	23	505	527	505	527	0.99
12	23	4.4e-05	0.0037	17.8	1.2	1	23	533	555	533	555	0.98
13	23	9.8e-05	0.0082	16.7	7.2	1	23	561	583	561	583	0.98
14	23	0.027	2.2	9.1	3.3	2	23	924	945	923	945	0.97
15	23	0.00068	0.057	14.1	5.0	1	23	951	973	951	973	0.98
16	23	1	85	4.1	0.0	2	23	980	1001	979	1001	0.96
17	23	7.7e-07	6.5e-05	23.3	1.3	2	23	1068	1089	1067	1089	0.98
18	23	0.036	3.1	8.6	5.8	1	23	1095	1117	1095	1117	0.98
19	23	0.001	0.088	13.5	3.9	1	23	1123	1145	1123	1145	0.97
20	23	0.00027	0.023	15.3	2.2	1	23	1151	1173	1151	1173	0.98
21	23	0.0004	0.034	14.8	1.6	2	23	1396	1417	1395	1417	0.97
22	23	2.2e-05	0.0018	18.8	3.3	1	23	1423	1445	1423	1445	0.98
23	23	5.7e-07	4.8e-05	23.7	3.0	1	23	1451	1474	1451	1474	0.96

Sequence Information

Coding Sequence: ATGTCTCTAGCCGTCGATTGCGTGAATTTCGCTATTCTACTCATGTGCTCTCGCGTATTTCACTTCGCTCTCGGTCTCAGCGCTCAATATTATAAGGCTCAACTGGACGCTCATCTGAAGCTTCACAATGAAAAGTGGTCGACCGAGGATGTACGAAAGTGCAAACTCTGCCATAAACAATTCACCCAACCTGCCCTTTATCGTCTTCACATTAGGGAACATTACAGAACCAAAATCgtcaaaaaaacgaagaaaggaaTGAGCCACAAGACAATGTACAAGTGTAAAATATGCTCGAAATCGTTCAAAAAACCGAGTCAATTGATGAGGCATATAAGAGTTCACACAGGGGAAAAACCGTTCAAGTGCGACATCTGTACTCGAGCCTTCACCCAAAAAGGATCTCTGCAGATTCATACGTGGAAGCACATAGGAGTTCGTCCGCATCGTTGCGAATTTTGCAACGCGAAGTTCAGTCAGAAAGGTAACTTGAACGCTCACATCTTGAGGGTTCACAATGCGAGAGAAGGCGATCCTATTTATAGCTGCACTCTGTGTACCTGCGTGTTCAAGAAGTTGGGTAGTCTCAATGGTCATATGAAGAGAATGCACTCGAATCCTACAGAGGAGCAATCGCAAAAGTGCGACAGTTCGACGGAAGCTGATATGCAAGCCACCGTTGACAATGTAATGTCGCAGCTAGCCTCGCTCGATGCAAACGTTAAGAATCAAGCGGATTCGACAATTTCCGTCGTCGCAAATCGTAGCGACGATATTCTCCAACAGGCTCTTAAGAATAGTGGATTGGGCAGCAAGAGAAAGACTACCGAGGAtacgagtaaaaaaatcgagccTCAAACGTCTTTCGTGACGTTGTTGGACAGAGCACAGGATGGTTCATTGAGGAGATACCTGACGATTAAACAGCGATGCATCGGAAGTATAAGATGGTACTCTTGTAACTTTTGTCACAAGGAATTTAAGAAACCATCGGATCTCATAAGACATCTGCGAGTTCATACGCAAGAAAAACCGTTCAAGTGTTCATCGTGCTATCGCTCGTTCGCCCTCAAATCGACTCTCAGAGCTCACGAGAGAAGGCACGCGGGTACTAAACAATACTCGTGCGCAAACTGCGATAAGACGTTCGCTTGTCACAGCAGTCTCACGTCTCATATGCGATCTCACGTGAAACCTCACAAGTGCGATATATGCGGCAAATCGTTCAGTACCAGTTCTGTTTTAAAGAGTCATATGAACAGTCATGCAACatcaaaatttaaaatatCACCGGAAGCCGAGAGTCTCGTGCCTCAGATAGTCCTTGAGGAACCACTTGTGATAAGCGACGCGGGAAACAAAATAAGCGTGACTCACGTAAAGCCGAAACAGCGACAGGTGTACGACAGTGCTGATGAGGCGAGACCTCACAAATGTTGGGTCTGTCCCGCGgcttttagaaaaataagccATCTCAAACAACATTACTTGAGGCATACGGGAGAAAGACCCTACAAATGTCCAAAGTGCGATAgGAGATTCACATCGAACAGTGTACTAAAGTCTCATTTACACACGCATGACGAATCAAGGCCGTACAGTTGTTCGGTGTGCAGCGCAAAATTTTCCACTCAGAGCAGCATGAAAAGACATCTGGTGACTCATAGCAACGTGAGGCCCTTTATGTGTCCTTACTGTCATAAGACTTTCAAGACATCGGTAAATTGTCGAAAACACATGAAGATTCATAAAAGCGAGCTCGCTGAACAGCAATTGGAGCAACAGAGAACGCAACAAGAGCCTCCACTCTCACCgatgagggagaaagaaacgatGCCAGGATTGCCTGAAAATCTGACTCTTCACGAAGACGTTGGTGTAACTTTTCAGTCTCAAATCGCTCCTGACTTTACCCAAGCTTTCAACGATCAGTTCCAGCCGATATCGATGGCGAAGGATAAATCGTATCTCACCCACGATGGGATGACTCAGACAATCGACAATCATAACTTACCCGTGGTAGATACAGATAACTTAGGAACAACCCAGACCTTGCATGCCGACGAAACGGGCACTATTACGCTACCTAACTACTCGGGAGATCAAACTCTCACGCCAGAGAGTATTCGAGAGATCGAGGAGACTTTGAATCAACAATTGTTCAACATTGGAATGAACGATCCGAATAATGTTTCTCTCGGCTCGCGGGATCAACAGACAATGAACATTATTTACGACAATGGAAAAACTTTGGATTCGGTCAACGTTCCCATGACTTCGAACATATTTCCCTCGCATTTCGATACTTTCGACATGAGTCAAATAACGCTCCAAACCGATACGGAAATCGACATGGGAATAAGTTCAGCAAACTCAACGAGTATGGCGAGTATCTTACCTCGTTCGGCGCAGGAAGAGCAGCGTCTCGTTCCCGTTACAAATTGTAGCAGCGGTGACGATTCGCCAAATAAATCGTCTCGTCACTTGATGGTCGCAAGTTCGATGCAAACTTGTCCCGAGCTTTCGAGGCCCGTTCAAGCTTGTCCGAAATATCCAAAAGTAATAGCCAAAGCCGACACCACCGATGTTACGGATATTTTAAATACCGATGGGGAATCGAACGAGCAAAAACCTATGATCGCTTTGCAATCGTCGATCACGAATCTTCCAAAAGATCATGAAACAAATTCCACGTTGCTCGAGAGAATCGAAGAGACAATGGATGCGAATGAAAGAACAACGATGGTTCTCCAGCCTGAAACTTTATTGCAGTGTCACATGTGCAGTAAAAAAGGTTTCACGATGGAAACATTGAAGAATCATTTGAACACGCATCGTGGAACGAAAGAGTTCCAATGCCCGCAGTGTCATTTAAAGTTTTGCACCAATGGAGGACTGAGTCGTCACTCGAAAATGCACACCGCTAAACAAGAATGGAGTTGTTCGATCTGCATGGAAACTTTGCCAACCGAGCCTCAGTTAAAGTTGCACGCTCAGATGCACGAAGACATCGAATGGACCGCAAATTCTATAGAACCGGACAGTTCACAGAAAGATCCGATTTCGATCAACGCGCGTGATTTTTTTGCAGTAACAACCCCAAAGATCGAGACCGTCGCAGATGCCTCGGTGTCCCAAAGAGTATTCCTCTCCACCCTCGGAGAGCGTGAGacgacgaaagagaaaaaagaatattcgaaCAAATGCCAATTTTGTCCAAAAACATTTCGTAAGCCGAGCGATTTGATAAGACATGTGAGAACTCACACGGGTGAGCGTCCTTATCACTGTAAATTTTGTGAGAAAAGTTTCGCGGTAAAGTGCACTCTCGATTCCCATACGAAAGTCCACACcggtaaaaaaacattttgctGTCACGTCTGCAACAGTCTGTTTGCAACCAAAGGAAGTCTTAAAGTTCACATGCGTTTGCACACGGGCTCCAAGCCCTTCAGATGTCCCATGTGTGATTTGCGCTTTCGTACATCGGGACATCGCAAAGTTCACGAACTAACGCACACCCGAGAGAATAAGGATGGCGTGAAacgcaaaaacaaacaaatgaaagtAACGGCGATCGCCGAGGTAGTAGCCGAGGTGGAAAAAACTGTGGAAAATTCGACAAACGTCGTGACGACTATCAACGAACAAGAGACCGAGGCAACTTATCAGAATCTCGATACGATAACGATAGGGGCGAGTGGAATGATGAATCAAATAACATTCAATCCCGATGGAAcgataataaacaataattcgaTGCTCTCGATAAACGAGAGCAATCAACTCGTTGCCAATCTACATTTTCTTCTCGCTAATGGTCTCGTAACTATTCAAGCGGACGATACTCTGTTGACTCAAGGGGCAATTAGTACAGAAGTCAACATCCCTCAGAACGAGACTGGTGTTAATATCGTAACACCGACTACCATTAATCTTCCACAGCAGCGGCAGCAACAAATTACTTATAACGCCAATCTCACCGATAATCTCGCAATAACAACGCAAATGCCAATATTTACCACTGCCGTCGATCAGCAACAGAGTATGATACAATTGAACGATAGCACGACTCTCATCCCCGTCGAGCCTTCCAATCCAATTccggaaaagagagaacaagTTCAACCACGACAATCGACTATCAAACAAGTCACATCTGGTAAATCAAACACGTCTAAAAAAGAATGCGACATATGCGGAAAAATGTTTATGAAACCGTGTCAAGTTGAGAGACACAAGCGTATTCACACCGGAGAGCGACCTTACAAGTGTGAATTGTGCTCCAAGTCATTCGCCCAGAAAGCAACGCTACAAATGCATCAGAAACATCATACGGGTGATCGACCTCATCCCTGTCCTCACTGTGACTATTCCTTTACTCAAAAGGGCAACCTTCAGACTCATTTGAAGAGGGCACATCAGCTAGATACTCTGGAAGTGAAAAAACTGAGACGCGGACAGCAACAGCTTTTGAGCGCAAAATTAATGCAGAATAATCCGGAAGAGGGCAGgatattgaatttcgatgatATATCGATTGTCGAGTATCTCAAATGA
Protein Sequence: MSLAVDCVNFAILLMCSRVFHFALGLSAQYYKAQLDAHLKLHNEKWSTEDVRKCKLCHKQFTQPALYRLHIREHYRTKIVKKTKKGMSHKTMYKCKICSKSFKKPSQLMRHIRVHTGEKPFKCDICTRAFTQKGSLQIHTWKHIGVRPHRCEFCNAKFSQKGNLNAHILRVHNAREGDPIYSCTLCTCVFKKLGSLNGHMKRMHSNPTEEQSQKCDSSTEADMQATVDNVMSQLASLDANVKNQADSTISVVANRSDDILQQALKNSGLGSKRKTTEDTSKKIEPQTSFVTLLDRAQDGSLRRYLTIKQRCIGSIRWYSCNFCHKEFKKPSDLIRHLRVHTQEKPFKCSSCYRSFALKSTLRAHERRHAGTKQYSCANCDKTFACHSSLTSHMRSHVKPHKCDICGKSFSTSSVLKSHMNSHATSKFKISPEAESLVPQIVLEEPLVISDAGNKISVTHVKPKQRQVYDSADEARPHKCWVCPAAFRKISHLKQHYLRHTGERPYKCPKCDRRFTSNSVLKSHLHTHDESRPYSCSVCSAKFSTQSSMKRHLVTHSNVRPFMCPYCHKTFKTSVNCRKHMKIHKSELAEQQLEQQRTQQEPPLSPMREKETMPGLPENLTLHEDVGVTFQSQIAPDFTQAFNDQFQPISMAKDKSYLTHDGMTQTIDNHNLPVVDTDNLGTTQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMNDPNNVSLGSRDQQTMNIIYDNGKTLDSVNVPMTSNIFPSHFDTFDMSQITLQTDTEIDMGISSANSTSMASILPRSAQEEQRLVPVTNCSSGDDSPNKSSRHLMVASSMQTCPELSRPVQACPKYPKVIAKADTTDVTDILNTDGESNEQKPMIALQSSITNLPKDHETNSTLLERIEETMDANERTTMVLQPETLLQCHMCSKKGFTMETLKNHLNTHRGTKEFQCPQCHLKFCTNGGLSRHSKMHTAKQEWSCSICMETLPTEPQLKLHAQMHEDIEWTANSIEPDSSQKDPISINARDFFAVTTPKIETVADASVSQRVFLSTLGERETTKEKKEYSNKCQFCPKTFRKPSDLIRHVRTHTGERPYHCKFCEKSFAVKCTLDSHTKVHTGKKTFCCHVCNSLFATKGSLKVHMRLHTGSKPFRCPMCDLRFRTSGHRKVHELTHTRENKDGVKRKNKQMKVTAIAEVVAEVEKTVENSTNVVTTINEQETEATYQNLDTITIGASGMMNQITFNPDGTIINNNSMLSINESNQLVANLHFLLANGLVTIQADDTLLTQGAISTEVNIPQNETGVNIVTPTTINLPQQRQQQITYNANLTDNLAITTQMPIFTTAVDQQQSMIQLNDSTTLIPVEPSNPIPEKREQVQPRQSTIKQVTSGKSNTSKKECDICGKMFMKPCQVERHKRIHTGERPYKCELCSKSFAQKATLQMHQKHHTGDRPHPCPHCDYSFTQKGNLQTHLKRAHQLDTLEVKKLRRGQQQLLSAKLMQNNPEEGRILNFDDISIVEYLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01057070; iTF_01056240; iTF_00051188; iTF_00629270;
90% Identity: iTF_01057070; iTF_01056240;
80% Identity: -