Dlut010149.1
Basic Information
- Insect
- Dyspetes luteomarginatus
- Gene Symbol
- ZNF236
- Assembly
- GCA_963669185.1
- Location
- OY769908.1:321399-327578[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.00012 0.0097 16.4 1.0 2 23 53 74 53 74 0.98 2 23 1.9e-08 1.6e-06 28.3 1.9 1 23 93 115 93 115 0.99 3 23 1.1e-05 0.00091 19.6 0.8 1 20 121 140 121 143 0.94 4 23 4.5e-06 0.00037 20.9 0.5 1 23 149 172 149 172 0.97 5 23 0.0025 0.2 12.3 2.3 1 23 181 204 181 204 0.98 6 23 1.1e-06 9.1e-05 22.8 2.8 1 23 318 340 318 340 0.98 7 23 0.00025 0.021 15.4 2.2 1 23 346 368 346 368 0.99 8 23 0.00074 0.06 13.9 5.4 1 23 374 396 374 396 0.99 9 23 9.2e-07 7.5e-05 23.1 2.6 1 23 400 422 400 422 0.98 10 23 0.00098 0.08 13.5 2.9 1 23 477 499 477 499 0.98 11 23 5.9e-06 0.00048 20.5 3.8 1 23 505 527 505 527 0.99 12 23 1.5e-05 0.0012 19.3 1.4 1 23 533 555 533 555 0.98 13 23 9.5e-05 0.0078 16.7 7.2 1 23 561 583 561 583 0.98 14 23 0.27 22 5.8 2.0 2 23 925 946 924 946 0.95 15 23 6.4e-05 0.0052 17.3 2.4 1 23 952 974 952 974 0.98 16 23 0.05 4.1 8.2 0.1 2 23 981 1002 980 1002 0.97 17 23 1.3e-07 1.1e-05 25.7 1.3 2 23 1080 1101 1080 1101 0.98 18 23 0.036 2.9 8.6 5.8 1 23 1107 1129 1107 1129 0.98 19 23 0.001 0.083 13.5 3.9 1 23 1135 1157 1135 1157 0.97 20 23 0.00033 0.027 15.0 2.6 1 23 1163 1185 1163 1185 0.98 21 23 0.00039 0.032 14.8 1.6 2 23 1407 1428 1406 1428 0.97 22 23 2.8e-05 0.0023 18.4 2.4 1 23 1434 1456 1434 1456 0.98 23 23 5.6e-07 4.6e-05 23.7 3.0 1 23 1462 1485 1462 1485 0.96
Sequence Information
- Coding Sequence
- ATGACTCTAGCCGTCGATTGCGTGAATTTCGCTATTCTTCTCATTTGCTCGCGTGTATTTCACTTTGCACTCGGTCTCAGCGCACAATATCACAAGGCCCAACTGGACGCTCATCTGAAGCTTCACAATGAAAAATGGTCGACTGAGGATGTACGAAAGTGCAAACTTTGTCAAAAACAATTTACTCAACCGGCACTTTATCGTCTTCATATCAGGGAACATTACAGAACAAAGATTgtcaaaaagacaaaaaaaggaGTTAATCACAAGACTATGTACAAGTGCAAGATATGCTcgaaatcgtttaaaaaaccGAGTCAATTAATGAGACATATAAGAGTGCACACGGGTGAAAAACCATTCAAGTGTAATATTTGTACTCGTGCATTCACGCAAAAGGGATCTCTGCAAATTCACATGTGGAAGCACATAGGAGTTCGACCATATCGTTGTGAATTTTGCAACGCTAAATTCAGTCAGAAAGGCAATTTAAATGCTCACATATTGAGGGTTCACAGTGCGAGAGAGGGTGATCCTATTTATAGTTGCACTTTGTGTACCTGCGTATTCAAGAAGTTGGGCAGTCTCAATGGTCATATAAAGAGAATGCACTCAAATCCTACAGAGGAACAATCGCAAAAATGCGATAGTTCAACAGAGGCAGATATACAAACGACTGTCGATAATGTTATGTCGCAGCTCGCCTCGCTCGAtgcaaatgtaaaaaatcaaGCTGATTCGACAAATTCTGTCGCAACAAATCATAGCGATGATATTCTCCAGCAGGCTCTTAAAAATAGTGGATTGGGCAGTAAGAGAAAAAGTTCCGATGATGCGAGCAAAAAAGTCGATTCTCAAACGTCATTCGTGACATTGTTGGACAGAGCTCAGGATGGCTCATTGAGAAGATATTTGACAATTAAACAACGATGCATCGGAAGCATAAGATGGTACTCTTGTAACTTTTGTCAcaaggaatttaaaaaaccaTCCGATCTCATAAGACATTTGCGAGTTCATACGCAAGAAAAACCTTTCAAGtgtTCATCTTGTTATCGGTCATTCGCGCTAAAATCGACTCTGAGAGCACACGAGAGAAGGCACGCAGGTACAAAGCAATACACTTGCTCAACATGTGACAAAATATTTGCTTGTCACAGCAGTCTGACATCTCACATGAGATCACACGTCAAGCCTCACAAGTGTAATCTTTGTGGAAAATCATTCAGTACGAATTCCGTATTGAAAAGTCATATAAATAGTCACACAacgaataaatcaaaaatttcacccgaAGCGGAGAGTCTCGTGCCTCAGATAATTCTTGAGGAACCGCTGGTCATCAGCGACGCGGGTAATAAAATAAGCGTTACTCATGTAAAGCCAAAACAGCGACAAGTCTATGACAATTCTGACGCTGCCAGACCGCATAAATGTTGGGTCTGTCCGGCAGCGTTTAGAAAAATAAGTCATCTCAAGCAGCATTATTTGCGGCACACCGGAGAAAGACCTTACAAATGCCCAAAGTGcgacaggagaTTTACATCAAATAGCGTGCTGAAATCGCATTTACACACTCACGATGAATCGAGACCATACAGTTGCACAGTTTGTAATGCAAAATTTTCCACTCAGAGTAGCATGAAAAGACATTTAGTGACTCACAGCAATGTGAGACCCTTTATGTGTCCTTATTGTCACAAGACTTTCAAGACATCGGTCAATTGTCGCAAACACATGAAGATTCATAAAAACGAGCTTGCTGAACagCAATTGGAACAGCAGAGAATTCAACGAGAGCCTCAACTTTTGCCCATCAAAGAGAAACAAATAATTCCCGGATTACCGGAAAATTTGACCCTCCACGAAGACGTTGGAGTAACTTTTCAGTCACAAATCGCTCCTGACTTTTCTCAAGCTTTCAACGATCAATTTCAGCCAATTACGATGACGAAGGAAAAATCTTATCTCACCCATGATGGAATGACACAAACTATCGACAATCATCATTTACCCGTGGTAGATACAGATAACTTAGGAACATCCCAGACCTTGCATGCCGACGAAACGGGCACTATTACGCTTCCTAATTACTCCGGTGATCAAACTCTCACACCAgAGAGTATACGAGAGATCGAGGAGACTTTGAATCAGCAATTGTTCAATATTGGAATGAATGATCCAAGTAACGTTGCTCTTGGCTCGAGAGATCAGCAAGGAATGAGTATTATTTATGATACTGGAAAAACTTTGGACTCAGTGAACAATGTAGCCATGAATTCTAGTATATTTCCATCACACTTTGATACATTCGACATAAGTCAAATAACGCTTCAAacTGATACGGAAATCGATATGGGAATAAGTTCGGCAAATTCGACAAGTATGGCAAGTATTTTACCTCGATCGGCCCAGGAAGAACAACGTCTTGTTCCCGTAACGACGTGCAGTAACAACGAGGAGTCACCAAAtaaatcatctcgtcacttgATGGTCGCAAGTTCAATGCAAACTTGTCCAGAACTATCGAGGCCAGTTCAAGCATGTCCAAAATATCCAAAAGTAATAGCCAAAGCCGACACTACCGACGTAACGGATATTTTAAATGCTCATTGTGAAAGTAACgaggaaaaatcgataattatccAACAATCTTCAATCTCgaaagtttcaaaaattcatggaAAAATGCCAACTTTGAATGAGAGATTAGAACCACCATTTGATGGGAGTGAAACAACGACGATTATTCTTGAACCTGAATCCTTTTTGCAATGCCACATGTGCGGTAAAAAAGGATtaacaatggaaaaattgaagaGTCATCTAAACAATCATCGAGGAACGAAAGAATTTCAATGCAACGAGTGTTCTTTGAAGTTTTGCACGAATGGAGGACTGAGCCGGCACTTGAAAATCCACGCGAGTAAACAAGAAGTAAAATGTTCGATTTGCATGAAAACGTTGCCAAACGAGGCTCAGCTAAAGTTGCACGCACAGATGCACGAGGACATAGAGTGGACCGGAAATTCGATAGAACCGGACAGTTCACAAAAAGAGCCAATAAGAATGGAGCCTCGTGATTTTTTGACCGCAACAACTAATACGATTGATAAAGTTCCCGAACAATTTCTGTCCGAGAAAGTAATGATGTCAATAGTCGAAGAGGAAGACGAAACGCAATCACGCAAGCGTTCAAATGTCGGTgcgtcaattgaaaaaaaagaatactcAAATAGATGTAAATATTGTCCAAAAACATTTCGTAAACCGAGCGATTTGATAAGACACGTGAGAACTCATACTGGCGAACGTCCTTATCACtgtaaattttgtgaaaaaagttttgcggTTAAATGCACCCTCGATTCTCACACAAAAGTTCatactggaaaaaaaactttttgctgTCACGTTTGCAACAGTCTTTTCGCGACAAAAGGAAGTCTGAAGGTTCACATGCGTCTGCATACTGGCTCAAAACCCTTCAAATGTCCAACGTGCGATTTGCGTTTTCGTACATCGGGTCATCGTAAAGTTCACGAATTGACCCACACGAGAGAGAACAAGAGTGGCCAAAAACGCAAGGCGAAACAGTTGAAAGTAACGGCAATTGCTGAGGTTGTCGCTGAGGTGGAAAAAACTgttgaaaattcgacaaacACTTTATCAACGATAAATGAACAAACGATCGAGACGACGTACCCGAATCTCGACACTATAACGATCGGAGCAAGTGGAATGACAAATCACATAACTTTTAATCCTGATGGAAcgattatcaataataattcaatgttATCGATAAACGAGAGCAATCAACTTGTGGCaaatcttcattttcttcttgCCAATGGTCTTGTCACTATTCAAGCTGCCGATACTCTCTTGCCACAAAATTCTACCTCGGAAGGAAACATTGTCGAGAACGATAATGAAATTACGAATCTCGTAGGACCGACAAATATTCATCTTGGATCGCAACGACAGCAGCAAACAAATTACAACAACAATATCAATGATAATCTCGTTATGACGACGCAATTGCCAAATTTTACGTGTAATATCGACCAACAACAGAGAATAATACAATTGAACGATTGTCCGCCGAATCTCACGCCGATTGAAACGTCAAATGTTATTGCGGAAAAAAAGCCACAGCGACAACagcaaaattttaaacatttgtCATTGGGAAAGACAAGCACATCGAAGAAAGAGTGCGATATTtgtggaaaaatgtttatgaaGCCTTGCCAGGTTGAGAGGCACAAGCGTATTCATACCGGCGAACGACCTTACAAATGCGAACTTTGTTCAAAAGCTTTTGCCCAAAAAGCAACATTGCAAATGCATCAAAAACATCATACGGGCGATCGGCCACATCCTTGTCCTCATTGCGATTATTCCTTCACGCAAAAGGGCAATCTTCAAACTCATTTGAAACGTGCACATCAGCTGGATACTCTggaagttaaaaaattgcgaaGAGGACAGCAGCAAATTTTCAGCGCTAAATTGATGCAGAATAATCCAGAAGAGAACAGGATATTAAACTTTGAGGATATATCGATCATCGAATATCTCAAATAA
- Protein Sequence
- MTLAVDCVNFAILLICSRVFHFALGLSAQYHKAQLDAHLKLHNEKWSTEDVRKCKLCQKQFTQPALYRLHIREHYRTKIVKKTKKGVNHKTMYKCKICSKSFKKPSQLMRHIRVHTGEKPFKCNICTRAFTQKGSLQIHMWKHIGVRPYRCEFCNAKFSQKGNLNAHILRVHSAREGDPIYSCTLCTCVFKKLGSLNGHIKRMHSNPTEEQSQKCDSSTEADIQTTVDNVMSQLASLDANVKNQADSTNSVATNHSDDILQQALKNSGLGSKRKSSDDASKKVDSQTSFVTLLDRAQDGSLRRYLTIKQRCIGSIRWYSCNFCHKEFKKPSDLIRHLRVHTQEKPFKCSSCYRSFALKSTLRAHERRHAGTKQYTCSTCDKIFACHSSLTSHMRSHVKPHKCNLCGKSFSTNSVLKSHINSHTTNKSKISPEAESLVPQIILEEPLVISDAGNKISVTHVKPKQRQVYDNSDAARPHKCWVCPAAFRKISHLKQHYLRHTGERPYKCPKCDRRFTSNSVLKSHLHTHDESRPYSCTVCNAKFSTQSSMKRHLVTHSNVRPFMCPYCHKTFKTSVNCRKHMKIHKNELAEQQLEQQRIQREPQLLPIKEKQIIPGLPENLTLHEDVGVTFQSQIAPDFSQAFNDQFQPITMTKEKSYLTHDGMTQTIDNHHLPVVDTDNLGTSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMNDPSNVALGSRDQQGMSIIYDTGKTLDSVNNVAMNSSIFPSHFDTFDISQITLQTDTEIDMGISSANSTSMASILPRSAQEEQRLVPVTTCSNNEESPNKSSRHLMVASSMQTCPELSRPVQACPKYPKVIAKADTTDVTDILNAHCESNEEKSIIIQQSSISKVSKIHGKMPTLNERLEPPFDGSETTTIILEPESFLQCHMCGKKGLTMEKLKSHLNNHRGTKEFQCNECSLKFCTNGGLSRHLKIHASKQEVKCSICMKTLPNEAQLKLHAQMHEDIEWTGNSIEPDSSQKEPIRMEPRDFLTATTNTIDKVPEQFLSEKVMMSIVEEEDETQSRKRSNVGASIEKKEYSNRCKYCPKTFRKPSDLIRHVRTHTGERPYHCKFCEKSFAVKCTLDSHTKVHTGKKTFCCHVCNSLFATKGSLKVHMRLHTGSKPFKCPTCDLRFRTSGHRKVHELTHTRENKSGQKRKAKQLKVTAIAEVVAEVEKTVENSTNTLSTINEQTIETTYPNLDTITIGASGMTNHITFNPDGTIINNNSMLSINESNQLVANLHFLLANGLVTIQAADTLLPQNSTSEGNIVENDNEITNLVGPTNIHLGSQRQQQTNYNNNINDNLVMTTQLPNFTCNIDQQQRIIQLNDCPPNLTPIETSNVIAEKKPQRQQQNFKHLSLGKTSTSKKECDICGKMFMKPCQVERHKRIHTGERPYKCELCSKAFAQKATLQMHQKHHTGDRPHPCPHCDYSFTQKGNLQTHLKRAHQLDTLEVKKLRRGQQQIFSAKLMQNNPEENRILNFEDISIIEYLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01057814;
- 90% Identity
- -
- 80% Identity
- -