Basic Information

Insect: Netelia thomsonii
Gene Symbol: ZNF236
Assembly: GCA_964017225.1
Location: OZ024921.1:40340037-40353479[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 6.9e-05 0.0052 17.3 0.7 2 23 178 199 177 199 0.96

2 27 0.00024 0.018 15.6 0.9 1 23 205 227 205 227 0.98

3 27 8.5e-06 0.00064 20.1 0.3 2 23 233 254 233 254 0.97

4 27 0.0086 0.65 10.7 0.2 3 23 262 282 260 282 0.96

5 27 0.00022 0.016 15.7 2.5 2 23 293 314 293 314 0.98

6 27 2.5e-08 1.9e-06 28.1 1.9 1 23 333 355 333 355 0.99

7 27 9.8e-05 0.0074 16.8 0.7 1 20 361 380 361 383 0.94

8 27 2.3e-05 0.0017 18.8 1.3 1 23 389 412 389 412 0.97

9 27 0.0018 0.14 12.8 2.8 1 23 421 444 421 444 0.98

10 27 1.4e-06 0.00011 22.6 2.8 1 23 558 580 558 580 0.98

11 27 0.00032 0.024 15.2 2.2 1 23 586 608 586 608 0.99

12 27 0.00079 0.06 14.0 5.0 1 23 614 636 614 636 0.98

13 27 1.9e-07 1.4e-05 25.4 2.3 1 23 640 662 640 662 0.98

14 27 0.0013 0.095 13.3 2.9 1 23 717 739 717 739 0.98

15 27 7.6e-06 0.00057 20.3 3.8 1 23 745 767 745 767 0.99

16 27 2.1e-05 0.0016 18.9 1.3 1 23 773 795 773 795 0.98

17 27 0.00012 0.0093 16.5 7.2 1 23 801 823 801 823 0.98

18 27 0.0025 0.19 12.4 2.5 2 23 1164 1185 1163 1185 0.97

19 27 0.00085 0.064 13.9 5.0 1 23 1191 1213 1191 1213 0.98

20 27 0.54 41 5.0 0.0 2 23 1220 1241 1219 1241 0.96

21 27 8.9e-07 6.7e-05 23.2 1.6 2 23 1308 1329 1308 1329 0.98

22 27 0.046 3.5 8.4 5.8 1 23 1335 1357 1335 1357 0.98

23 27 0.0013 0.099 13.3 3.9 1 23 1363 1385 1363 1385 0.97

24 27 0.00034 0.026 15.1 2.2 1 23 1391 1413 1391 1413 0.98

25 27 0.00051 0.038 14.6 1.6 2 23 1636 1657 1635 1657 0.97

26 27 2.7e-05 0.0021 18.6 3.3 1 23 1663 1685 1663 1685 0.98

27 27 7.2e-07 5.4e-05 23.5 3.0 1 23 1691 1714 1691 1714 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	6.9e-05	0.0052	17.3	0.7	2	23	178	199	177	199	0.96
2	27	0.00024	0.018	15.6	0.9	1	23	205	227	205	227	0.98
3	27	8.5e-06	0.00064	20.1	0.3	2	23	233	254	233	254	0.97
4	27	0.0086	0.65	10.7	0.2	3	23	262	282	260	282	0.96
5	27	0.00022	0.016	15.7	2.5	2	23	293	314	293	314	0.98
6	27	2.5e-08	1.9e-06	28.1	1.9	1	23	333	355	333	355	0.99
7	27	9.8e-05	0.0074	16.8	0.7	1	20	361	380	361	383	0.94
8	27	2.3e-05	0.0017	18.8	1.3	1	23	389	412	389	412	0.97
9	27	0.0018	0.14	12.8	2.8	1	23	421	444	421	444	0.98
10	27	1.4e-06	0.00011	22.6	2.8	1	23	558	580	558	580	0.98
11	27	0.00032	0.024	15.2	2.2	1	23	586	608	586	608	0.99
12	27	0.00079	0.06	14.0	5.0	1	23	614	636	614	636	0.98
13	27	1.9e-07	1.4e-05	25.4	2.3	1	23	640	662	640	662	0.98
14	27	0.0013	0.095	13.3	2.9	1	23	717	739	717	739	0.98
15	27	7.6e-06	0.00057	20.3	3.8	1	23	745	767	745	767	0.99
16	27	2.1e-05	0.0016	18.9	1.3	1	23	773	795	773	795	0.98
17	27	0.00012	0.0093	16.5	7.2	1	23	801	823	801	823	0.98
18	27	0.0025	0.19	12.4	2.5	2	23	1164	1185	1163	1185	0.97
19	27	0.00085	0.064	13.9	5.0	1	23	1191	1213	1191	1213	0.98
20	27	0.54	41	5.0	0.0	2	23	1220	1241	1219	1241	0.96
21	27	8.9e-07	6.7e-05	23.2	1.6	2	23	1308	1329	1308	1329	0.98
22	27	0.046	3.5	8.4	5.8	1	23	1335	1357	1335	1357	0.98
23	27	0.0013	0.099	13.3	3.9	1	23	1363	1385	1363	1385	0.97
24	27	0.00034	0.026	15.1	2.2	1	23	1391	1413	1391	1413	0.98
25	27	0.00051	0.038	14.6	1.6	2	23	1636	1657	1635	1657	0.97
26	27	2.7e-05	0.0021	18.6	3.3	1	23	1663	1685	1663	1685	0.98
27	27	7.2e-07	5.4e-05	23.5	3.0	1	23	1691	1714	1691	1714	0.96

Sequence Information

Coding Sequence: ATGTTGAAAAAGCAAACATCACTTTCGGAGACGGCCTCTTTGACCCTAGATACGATGCCTCTAGGTTTTGTTATATCGGACGACGGACGTACAGTGCTGGCAGTGACGGGCCGTAGAGCGCACGAAGAGGGAATTATGGAACTCGCGACTACGCCAGTGGCGTACATTCAGCAGAGCAATTTAATAACCCAGCCGATCATCGGAGTAAATAACGGAACGTCTCTCGTAAACGTGCCTGTAGTACGAATTAACGTCGAAAATATTTCGGTAAGCGGCATGCAACAGACGATAGTTCAATCCACGACTGAAAAATCTCCCGAAACGACAAAAAAGCAGCCAAGGATGGAAAACATTCGGTTAAACGATACGGAAATTTCGCACAGGGACGTTGAAGCTTCGAAAACCACGGTCGACGAAGAAATCCTAGACGATCCGTCGACCGTGGCAACGTCCGAAGTTCCTACCAAGAGAAGTCCCGGCAGGCCACGAAAAAATGGGCTAACGACAATTTCGAACACTATCGATAAAATGCGATGCGACATCTGCGGTCAAGAATTCACTCGACAATTGTTGTATCGTCGACACATGGAGCAACACGCGGCGGAAAAGCCGCACAGATGTCCCAAGTGTTCCGCCTCGTTCAACGTACCGATGAATTTCACGCTTCACATGGCGACGCATAACACCGGCGAGCCAAAGTGTCCCGAGTGCGGCAGGAAATTCGCGCGAATGGCTAGTCTCAAGTCTCACATGTTGCTTCATCAAAAGGAGGAAAGTCTCTTTTGCACCGAATGCGAGGATGCATTTTCGACCAAGGCTCAACTGGACGCTCATCTGAAGCTTCACAATGAAAAGTGGTCGACCGAGGATGTACGAAAGTGCAAACTTTGCCATAAACAATTCACCCAACCTGCCCTTTATCGTCTTCACATCAGGGAACATTACAGAaCCAAAATCGtcaaaaagacgaagaaaggaATGAGCCACAAGACAATGTACAAGTGTAAAATATGCTCGAAATCTTTCAAAAAACCGAGTCAATTGATGAGGCATATAAGAGTTCACACAGGGGAAAAACCGTTCAAGTGCGACATCTGTACTCGAGCTTTCACGCAAAAGGGATCTCTGCAGATTCATACGTGGAAGCACATAGGAGTTCGTCCGCATCGTTGCGAATTTTGCAACGCGAAATTCAGTCAGAAAGGTAACTTGAACGCTCACATATTGAGGGTTCACAATGCGAGGGAAGGCGATCCTATTTATAGCTGCACTCTGTGTACCTGCGTGTTCAAGAAGTTAGGTAGTCTCAATGGTCACATGAAGAGAATGCACTCGAATCCGACGGAGGAACAATCGCAAAAATGCGACAGTTCGACGGAGGCTGATATGCAAGCGACCGTTGACAATGTAATGTCTCAACTCGCCTCGCTCGACGCAAACGTTAAGAATCAAGCGGATTCGACAAATTCCGTGGTTGCAAATCGTAGCGATGATATTCTTCAACAGGCTCTTAAGAATAGTGGATTGGGCAGCAAGAGAAAGATTTCCGAGGATACGAGCAAAAAAATCGAGCCTCAAACGTCCTTCGTGACGTTGTTGGACAGAGCACAGGATGGTTCATTGAGGAGATACCTGACGATTAAACAGCGATGCATCGGAAGTATAAGATGGTACTCTTGTAACTTTTGTCACAAGGAGTTTAAAAAACCATCGGATCTCATAAGACACCTGCGAGTTCATACGCAAGAAAAACCGTTCAAGTGTTCATCGTGCTATCGCTCGTTCGCCCTTAAATCGACTCTGAGAGCTCACGAGAGAAGGCACGCGGGTACTAAACAGTACTCTTGCGCAAATTGCGATAAAACGTTTGCTTGTCATAGTAGTCTCACGTCTCATATGCGATCTCACGTAAAACCTCACAAGTGCGATATATGCGGCAAATCGTTCAGTACGAGTTCCGTTCTAAAGAGTCATATGAATAGTCATGCAACATCAAAATTTAAAATATCGCCGGAGGCCGAGAGTCTCGTGCCTCAGATAGTACTCGAGGAACCACTTGTGATAAGCGACGCGGGAAACAAAATAAGCGTGACTCATGTAAAACCAAAACAGCGACAGGTGTACGACAGTGCTGATGAGGCGAGACCTCACAAATGTTGGGTCTGTCCCGCGGCTTTTAGAAAAATAAGCCATCTCAAGCAACATTACTTGAGGCATACGGGAGAAAGACCCTACAAATGTCCAAAGTGCGACAGgAGATTCACATCGAACAGTGTACTCAAATCTCATTTACACACGCATGACGAATCGAGGCCGTACAGTTGTTCGGTTTGTAACGCAAAGTTTTCTACTCAGAGTAGCATGAAAAGACATCTGGTGACTCATAGCAACGTGAGGCCCTTTATGTGTCCTTACTGTCATAAGACTTTCAAGACATCGGTAAATTGCCGAAAACACATGAAAATTCATAAGAGCGAACTCGCTGAACAGCAATTGGAGCAACAGAGAACGCAACAGGAACCTCCACTCTCACCGATGAGGGAGAAAGAAACAATTCCAGGATTGCCTGAAAATCTGACGCTTCACGAAGACGTTGGTGTAACTTTTCAGTCTCAAATCGCTCCTGACTTTACCCAAGCTTTCAACGATCAGTTCCAGCCGATATCGATGACGAAGGATAAATCGTATCTCACCCACGACGGGATGACTCAGACAATCGACAATCATAATTTACCCGTGGTAGATACAGATAACTTAGGAACAACCCAGACCTTGCATGCCGACGAAACGGGCACTATTACGCTACCTAACTACTCGGGAGATCAAACTCTCACACCAGAGAGTATACGAGAGATCGAGGAGACTTTGAATCAACAATTGTTCAATATTGGAATGAACGATCCGAATAATGTTTCTCTCGGTTCGCGGGATCAGCAGACAATGAACATTATTTACGACAATGGGAAAACCTTGGATTCGGTAAACGTACCCATGACTTCCAACATATTTCCCTCGCACTTCGATACTTTCGACATGAGTCAAATAACGCTTCAAaCCGATACGGAAATTGACATGGGTATAAGTTCAGCAAATTCAACTAGTATGGCAAGTATATTGCCTCGTTCGGCGCAGGAAGAGCAGCGTCTCGTTCCCGTTACGAATTGTAGCAGCGGCGACGATTCGCCAAATAAATCGTCTCGTCACTTGATGGTCGCGAGTTCGATGCAAACTTGTCCCGAGCTTTCGAGGCCCGTTCAAGCTTGTCCGAAATATCCAAAAGTAATAGCCAAAGCCGACACCACCGATGTTACGGATATTTTAAACACCGATGGCGAATCGAACGAGCCGAAACCTTTAATCACATTGCAATCGACGATCGCAAATCTTCCAAAAGATCATGAAAAAACGTCCATCTTGCTCGAGAGAATCGAAGAGACGATGGATGCGAATGAAACGACAACGATGGTTCTCCAGCCTGAAACTTTGCTGCAATGTCACATGTGCGGTAAAAAAGGTTTCACGATGGAAACATTGAAGAATCATTTGAATACGCATCGAGGAACGAAAGAGTTCCAATGCCCGCAGTGTCACCTGAAGTTTTGCACGAATGGAGGACTGAGTCGTCACTCGAAAATGCACACTACTAAACATGATTGGAGTTGTTCGATCTGCATGGAAACTTTGCCAACCGAGGCTCAGCTAAAGTTACACGCTCAGATGCACGAAGACATCGAATGGACCGCAAATTCTATAGAACCGGACAGTTCACAGAAAGACCCGATCACGATCAACGCGCGTGATTTTTTTACAGTATCAACCTCAAAGAACGAGACCGTCGCAGATGCCTCGGTGTCCGAAAAAGTATTCCTCTCGACCCTTGGAGAGCGCGAGACGACGAAAGAGAAGAAGGAATATTCTAACAGATGCAAATTTTGTCCAAAGACATTTCGTAAACCGAGCGATTTGATAAGGCACGTGAGAACTCACACGGGTGAGCGTCCTTATCACTGTAAATTTTGCGAGAAAAGTTTCGCGGTAAAGTGCACTCTCGATTCCCACACGAAAGTCCACACCGGGAAGAAAACATTTTGCTGTCATGTCTGTAACAGTCTGTTCGCAACCAAAGGAAGTCTAAAAGTTCACATGCGTTTACACACGGGCTCGAAACCCTTTAGGTGTCCAATGTGCGATTTGCGCTTTCGTACATCGGGACATCGCAAGGTTCACGAATTAACGCACACCCGAGAGAACAAGGGTGGGATGAAAcgcaaaaacaaacaaatgaaaGTATCGGCGATCGCCGAGGTAGTAGCGGAGGTGGAAAAAACTGTGGAAAATTCGACGAACGTCGTGACAACTATCAACGAACAACAGACCGAGGCAACGTATCAGAATCTCGATACGATAACCATTGGGGCGAGTGGAATGATGAATCACATAACGTTCAATCCCGATGGAAcgataataaacaataattcgATGCTCTCGATAAACGAGAGTAATCAACTCGTTGCCAATCTACATTTTCTTCTCGCTAATGGTCTCGTGACTATTCAAGCGGACGATACTCTTTTGTCTCAACCGACACCAAGTACGGAAGTCAATATCGCTCAGAATGAGACTGGCGTCAATATCGTAACACCGACTACCATTAATCTTCcacagcagcggcagcagcaaaTTACTTATAACGCCAATCTCACAGATAATCTTGCGATTACGACACAAATGCCAACATTTACCACTGCCCTCGATCAGCAACAGAGTATCATACAATTGAACGATAATACGACTCTCGTGTCCGTCGAACCTTCCAATCCAATTCCGGAAAAGAGAGTACAAGTTCAACAACGACAATCGAGTACCAAACAAGTCACACCTGGTAAGTCAAACGCATCGAAAAAAGAATGCGACATATGCGGAAAAATGTTTATGAAGCCGTGTCAAGTCGAGAGACACAAACGTATTCACACTGGCGAACGACCTTACAAGTGTGAATTATGCTCAAAGTCATTCGCCCAGAAAGCAACGCTACAAATGCACCAGAAACATCATACCGGCGATCGACCTCATCCCTGTCCGCACTGTGATTATTCCTTCACCCAAAAGGGCAATCTTCAGACTCATTTGAAGAGGGCACATCAGCTAGATACTCTAGAAGTGAAAAAACTGCGACGCGGACAGCAACAACTTCTGAGCGCAAAATTAATGCAGAATAATCCGGAAGAGGGCAGGATATTGAATTTTGATGATATATCGATCGTCGAGTATCTCAAATGA
Protein Sequence: MLKKQTSLSETASLTLDTMPLGFVISDDGRTVLAVTGRRAHEEGIMELATTPVAYIQQSNLITQPIIGVNNGTSLVNVPVVRINVENISVSGMQQTIVQSTTEKSPETTKKQPRMENIRLNDTEISHRDVEASKTTVDEEILDDPSTVATSEVPTKRSPGRPRKNGLTTISNTIDKMRCDICGQEFTRQLLYRRHMEQHAAEKPHRCPKCSASFNVPMNFTLHMATHNTGEPKCPECGRKFARMASLKSHMLLHQKEESLFCTECEDAFSTKAQLDAHLKLHNEKWSTEDVRKCKLCHKQFTQPALYRLHIREHYRTKIVKKTKKGMSHKTMYKCKICSKSFKKPSQLMRHIRVHTGEKPFKCDICTRAFTQKGSLQIHTWKHIGVRPHRCEFCNAKFSQKGNLNAHILRVHNAREGDPIYSCTLCTCVFKKLGSLNGHMKRMHSNPTEEQSQKCDSSTEADMQATVDNVMSQLASLDANVKNQADSTNSVVANRSDDILQQALKNSGLGSKRKISEDTSKKIEPQTSFVTLLDRAQDGSLRRYLTIKQRCIGSIRWYSCNFCHKEFKKPSDLIRHLRVHTQEKPFKCSSCYRSFALKSTLRAHERRHAGTKQYSCANCDKTFACHSSLTSHMRSHVKPHKCDICGKSFSTSSVLKSHMNSHATSKFKISPEAESLVPQIVLEEPLVISDAGNKISVTHVKPKQRQVYDSADEARPHKCWVCPAAFRKISHLKQHYLRHTGERPYKCPKCDRRFTSNSVLKSHLHTHDESRPYSCSVCNAKFSTQSSMKRHLVTHSNVRPFMCPYCHKTFKTSVNCRKHMKIHKSELAEQQLEQQRTQQEPPLSPMREKETIPGLPENLTLHEDVGVTFQSQIAPDFTQAFNDQFQPISMTKDKSYLTHDGMTQTIDNHNLPVVDTDNLGTTQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMNDPNNVSLGSRDQQTMNIIYDNGKTLDSVNVPMTSNIFPSHFDTFDMSQITLQTDTEIDMGISSANSTSMASILPRSAQEEQRLVPVTNCSSGDDSPNKSSRHLMVASSMQTCPELSRPVQACPKYPKVIAKADTTDVTDILNTDGESNEPKPLITLQSTIANLPKDHEKTSILLERIEETMDANETTTMVLQPETLLQCHMCGKKGFTMETLKNHLNTHRGTKEFQCPQCHLKFCTNGGLSRHSKMHTTKHDWSCSICMETLPTEAQLKLHAQMHEDIEWTANSIEPDSSQKDPITINARDFFTVSTSKNETVADASVSEKVFLSTLGERETTKEKKEYSNRCKFCPKTFRKPSDLIRHVRTHTGERPYHCKFCEKSFAVKCTLDSHTKVHTGKKTFCCHVCNSLFATKGSLKVHMRLHTGSKPFRCPMCDLRFRTSGHRKVHELTHTRENKGGMKRKNKQMKVSAIAEVVAEVEKTVENSTNVVTTINEQQTEATYQNLDTITIGASGMMNHITFNPDGTIINNNSMLSINESNQLVANLHFLLANGLVTIQADDTLLSQPTPSTEVNIAQNETGVNIVTPTTINLPQQRQQQITYNANLTDNLAITTQMPTFTTALDQQQSIIQLNDNTTLVSVEPSNPIPEKRVQVQQRQSSTKQVTPGKSNASKKECDICGKMFMKPCQVERHKRIHTGERPYKCELCSKSFAQKATLQMHQKHHTGDRPHPCPHCDYSFTQKGNLQTHLKRAHQLDTLEVKKLRRGQQQLLSAKLMQNNPEEGRILNFDDISIVEYLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01057814;
90% Identity: iTF_01057814;
80% Identity: -