Nvir016490.1
Basic Information
- Insect
- Netelia virgata
- Gene Symbol
- -
- Assembly
- GCA_951802705.1
- Location
- OX637867.1:31284421-31297352[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.3e-07 0.019 14.4 0.1 48 130 17 95 11 104 0.61 2 2 6e-09 0.00012 21.6 0.9 322 381 196 257 178 270 0.80
Sequence Information
- Coding Sequence
- ATGAGATCGGGTGCAACGGTTAATCCGGACGCTCAGGATCGTACGACCCTGCAGATACAATCGAAACTGGGCAATTATTCGCTCGTGAAGCATTTGCTGGACGAGCCGAAGCGTTTGATTGGAATCGAGGGTGTACCGGCGAGTCCGGCGCCCTCGGGTGCAACAACGACGAGGTTACCTTCGGGAACCAACACATGCCGGAGTTCGCCTTCGTCCCAGGAGTTCAAGAAGCCCGGAAGCGGACCGAGATCGTCAACGagctcctcctcTCACGCATCGCAGAGAGGCGGTTTTGTAAAGCCGGCCGATGGTAAACCACCGTATGGCGGTAGAGGTGGATATCCTGGCCAACCGGTCAAACACGGTGGTAACAGCAACGATCATAGAAGCCACGGACTTCTTCCGGCCAAGGGACCACCTCCCTCCTCCGCATTGTCTTCTTCCACCTCTACTTCGTCCTCGACGATAAACCCGAATCCTCATACGGGTGTTTCGAGCGCCCCTGGCGGCAGCCTCGTAACTTCCGGTAACGGCTCTTCCACCGGTACAAACAGCAGCGTGTGCACTCCGGTAAATTCGAACAGGGTACACTCGGCAGCTTCCAGACTATCGAGGCTACCCCTCGACAATGGTACGACTTCCCGTCACGGTGTCAACGAGAATTCAGCTGATCTCGAGAACATCCTCAAGGAAATGACGATGCCGCCCACACCGCTCACGGCCATAGCCCAGACACCGAGAAAAGAGCTCGAGTCCAAGTTCACTTTCAACCCAGTGCTCGCTAAGCTGACCGAGGTGCCGTCGAACGAGCCACCGAAGCCGCCACGTAAgtctatttttcataattaa
- Protein Sequence
- MRSGATVNPDAQDRTTLQIQSKLGNYSLVKHLLDEPKRLIGIEGVPASPAPSGATTTRLPSGTNTCRSSPSSQEFKKPGSGPRSSTSSSSHASQRGGFVKPADGKPPYGGRGGYPGQPVKHGGNSNDHRSHGLLPAKGPPPSSALSSSTSTSSSTINPNPHTGVSSAPGGSLVTSGNGSSTGTNSSVCTPVNSNRVHSAASRLSRLPLDNGTTSRHGVNENSADLENILKEMTMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVPSNEPPKPPRKSIFHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01055979;
- 90% Identity
- iTF_01055979;
- 80% Identity
- -