Nmel010249.2
Basic Information
- Insect
- Netelia melanura
- Gene Symbol
- -
- Assembly
- GCA_964007305.1
- Location
- OZ023255.1:33552281-33562401[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8e-05 1.1 9.1 8.8 47 130 13 93 7 191 0.68 2 2 8.5e-09 0.00012 22.1 0.4 321 381 193 255 174 268 0.80
Sequence Information
- Coding Sequence
- ATGTTTCAGGTTAATCCAGACGCGCAGGATCGTACGACCCTGCAGATACAATCGAAACTGGGCAATTATTCGCTCGTGAAGCATTTGCTGGACGAGCCGAAGCGTTTGATTGGAATCGAGGGTGTACCGGCGAGTCCGGCGCCCTCGGGTGCAACAACGACGAGGTTGCCTTCGGCAACCAACACATGCCGGAGTTCTCCTTCGTCGCAGGAGTTCAAGAAGCCCGGAAGCGGACCGAGATCGTCCTCCAgctcctcctcgtcTCACGCATCGCAGAGAGGCGGTTTTGTAAAGCCGGCCGATGGTAAACCACCGTATGGCGGTAGAGGTGGATATCCTGGCCAACCGGTCAAACACGGTGGTAACAGCAACGATCATAGAAGCCACGGACTTCTTCCGGCCAAGGGACCACCTCCCTCGTCCGCATTGTCTTCTTCCACCTCTACTTCGTCCTCGACGATAAACCCGAATCCTCATACGGGTGTTTCGAGCGCCCCTGGCGGCAACCTCGTAACTTCCGGTAACGGCTCTTCCACCGGTACAAACAGCAGCGTGTGCACTCCGGTAAATTCGAACAGGGTACACTCGGCAGCTTCCAGACTATCCAGGCTACCTCTCGACAATGGTACGACTTCCCGCCACGGTGTCAACGAGAATTCAGCTGATCTCGAGAACATCCTCAAGGAAATGACGATGCCGCCCACACCGCTCACGGCCATAGCCCAGACACCGAGAAAAGAGCTCGAGTCCAAGTTCACTTTCAACCCAGTGCTCGCTAAgCTGACCGAGGTCCCGTCGAACGAGCCACCGAAGCCACCACGTAAgttcatttttcataattaa
- Protein Sequence
- MFQVNPDAQDRTTLQIQSKLGNYSLVKHLLDEPKRLIGIEGVPASPAPSGATTTRLPSATNTCRSSPSSQEFKKPGSGPRSSSSSSSSHASQRGGFVKPADGKPPYGGRGGYPGQPVKHGGNSNDHRSHGLLPAKGPPPSSALSSSTSTSSSTINPNPHTGVSSAPGGNLVTSGNGSSTGTNSSVCTPVNSNRVHSAASRLSRLPLDNGTTSRHGVNENSADLENILKEMTMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVPSNEPPKPPRKFIFHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01056806; iTF_01057636; iTF_00629096;
- 90% Identity
- iTF_01056806; iTF_01057636;
- 80% Identity
- -