Nvir006939.1
Basic Information
- Insect
- Netelia virgata
- Gene Symbol
- Rel
- Assembly
- GCA_951802705.1
- Location
- OX637864.1:36132806-36136947[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-41 1e-37 129.9 0.4 2 168 53 243 52 244 0.91
Sequence Information
- Coding Sequence
- ATGGATTCTCACTGCTTTAGTGGCATCATGTCACCCATGTCAATGTCCCTCTCACCTCAAACCGATGAATCTACATCAAACTTATTTCCCATGAATGAGGAAAATTTTATGACCTTAACAGACACAATGGCAGAGGAAATGCCACCGACTCGAGTAATCATACTGGATCAGCCTGTCGATAAATTCAGATTCAGATATAAGTCTGAAATGATGGGCACGCATGGATGTTTGTCCAGTGCAAGTAGCACTTCGAGAAGGAAGAGACAGGCTCCAACTGCAAAAcTTACTGGTTTTCTGGGTCAAAGAGCCAAAATTCGTTGTACTCTTGTGACTTCGGATCCGGATAGAAGGATCCCTCATGCTCATCATTTGGTGAAGCGGGAGGGCACCGTTGAAAATGATGCGCCGTACGAAATCGAAGTCTCTGGGGAGAATAATTTCACAGCACAaTTTCATGGTATGGGGATAATTCATACtgcaaaaaaacatattaagGACgaactcgtgaaaaaaatgaagttggAGGCGCTCGAAAAGCACAGATGTTCGAATGTCAATATAACGAGTCTACGTGTTTCCGAAATTACTCAgATCACAATGGATGCCGATGCTGCTCAAAAGTGGATGAATCTGAACAGTGTTTCACTGTGCTTTCAAGCTTTCGTGGAGAGTCAAAATGGTGTCATGAAACCCATTACGGAACCAGTTTATTCCAATCCCATAAATAATCTCAAGAGTGCTTTGACCGGAGAATTGAAAATCTGTCGAATCGACAAGTATTCGAGTCCGTGTGAAGGTGGAGAGGAAGTTTTTATGCTGGTCGAGAAGGTTGGCAAAAAAAACATAAGAGTCAAGTTTTTTGAGGTTGATGAGAACGATCATGAGATCTGGTCCAGTTACGGACGTTTCTCCGAATTGGACGTTCATCATCAATACGCTATCGTATTCAGAACGCCTCGGTACGATCGTGAAATAAGTGCTCCGAAACAGGTTTTCATAAAGCTTGAACGGCCAACCGATGGAGATAGCTCGGAACCTGTAAGCTTTACGTACAAGCCGAGGGATTGTTTATTCAATAAAAAACGTGCTCGGATCTCGTATTCCGGAAGTTCggatttcaataaattcaaaCAAACGGAAAAcaacgtaaatataaataattacccGACACCGGCAAACGAGTCGATCAACAACTCCTCGAATGAACTCGCCAAATGGCTTCAGGACAATAACAAAATGCCATCCGACGAATATGCCAAATTTGTCCACTCTTTGGACATCGAGGGATACCAGAATACACTGGGACCATCTGAGGATGATATGATGTTGACCACCGATGGAGGTTCCTCGGAAGATAATGCAGAGAGTTTTGCGGAAAGTTTGGTACATGaaactatgaaaaaaatacaaaaagaaccGCAGAAAGAGAAGGAATTCTTTGCAAAAATGTTCGAAGAACGCACCACTTACGGAGATACACTATTGCATTCGGCACTTCGCCACGGGCAACGCGACATCGTTAAGCTCATTCTCATGATTTCTGCAAAAGATCCGGACTTTAAAAACGTTGTACATCTAAAAAATAGTTCTGGCAAGACACCATTACACTATGCAGTTTTGTTAAATCAACCAGAAGTCGTTCGGGCGCTACTTGTACTAGGTGCAAATGCAAACGAAAACGACGACCGCGATTTCTGTCCCCTTCACTATGCAGTCAAGAGAGCTGAAGCGGGTGCATGTGTCGATGCATTATTGACGAAGAAAGTAAATTTGCAGGCCCGTGACGAAGCAGGGTGGACACCCCTGCAATTAGCGGTTGAAGCTGGATCGTTACATGCTATTAAATCGCTACTCAAAGCCGGAGCAAATCCCGACGACTCTGAAGTATCGTACGGTCGGACGGCTCTTCACATTGCCGTTGAAAATGGTCATATCGATGTTGTCAAGTATCTTCTCGAAAAGACCGAAATCGACGTCAATAAGACAAATTTGGGTGGAAATACGGCGTTGCACAGTGCCGTTGTAAATTCGGGTATGCGAGCAAAGGAAATGTGCAAGATTCTACTTGAACACGGTGCTGACCCACACATACCAAATAACAGCAGAGACACGATGGAAGAGaaggATGATAAGGCATTAGCCGCGAGTGTTAAGGAAGAAGTAGATTGTGACGATGATATGGGACAGGATGCTGGCCAGACGTCTTTCGATCTCGCCTCAAACAAGCCTGAGATCCTCCGCTTACTCGCTCAAGCTACCGAAACACAAAACGCCGATGATCTCGATACCGtacaaataaaagaagaagttACGAATGTCGATACATTGACAAGCATCTTAGATGCTCACACGCTCGACAGATTAGCGGAAATTCTTGATAAGAATTGTAGCTGGAAAAAACTCGCGAAAAATCTTGACTGCGACTACTTGTTGACTACGCTCGATACAGACGAATCAAGTCCATCTTTAACTATTCTGAATTACGCTGATGTTCAAGGCAACCTTACGTTAAAAAACCTGCTGGATTCATTGACGGAAATCGGTGATGAGCAGGCTGTAAAATTCATCAAGGAAATTATGAATCAACCCAGCTCTACTTAA
- Protein Sequence
- MDSHCFSGIMSPMSMSLSPQTDESTSNLFPMNEENFMTLTDTMAEEMPPTRVIILDQPVDKFRFRYKSEMMGTHGCLSSASSTSRRKRQAPTAKLTGFLGQRAKIRCTLVTSDPDRRIPHAHHLVKREGTVENDAPYEIEVSGENNFTAQFHGMGIIHTAKKHIKDELVKKMKLEALEKHRCSNVNITSLRVSEITQITMDADAAQKWMNLNSVSLCFQAFVESQNGVMKPITEPVYSNPINNLKSALTGELKICRIDKYSSPCEGGEEVFMLVEKVGKKNIRVKFFEVDENDHEIWSSYGRFSELDVHHQYAIVFRTPRYDREISAPKQVFIKLERPTDGDSSEPVSFTYKPRDCLFNKKRARISYSGSSDFNKFKQTENNVNINNYPTPANESINNSSNELAKWLQDNNKMPSDEYAKFVHSLDIEGYQNTLGPSEDDMMLTTDGGSSEDNAESFAESLVHETMKKIQKEPQKEKEFFAKMFEERTTYGDTLLHSALRHGQRDIVKLILMISAKDPDFKNVVHLKNSSGKTPLHYAVLLNQPEVVRALLVLGANANENDDRDFCPLHYAVKRAEAGACVDALLTKKVNLQARDEAGWTPLQLAVEAGSLHAIKSLLKAGANPDDSEVSYGRTALHIAVENGHIDVVKYLLEKTEIDVNKTNLGGNTALHSAVVNSGMRAKEMCKILLEHGADPHIPNNSRDTMEEKDDKALAASVKEEVDCDDDMGQDAGQTSFDLASNKPEILRLLAQATETQNADDLDTVQIKEEVTNVDTLTSILDAHTLDRLAEILDKNCSWKKLAKNLDCDYLLTTLDTDESSPSLTILNYADVQGNLTLKNLLDSLTEIGDEQAVKFIKEIMNQPSST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00628880;
- 90% Identity
- iTF_01056564; iTF_01055743;
- 80% Identity
- -