Ntho005483.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Netelia thomsonii
Gene Symbol
Rel
Assembly
GCA_964017225.1
Location
OZ024921.1:10560477-10565671[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.1e-41 2.5e-37 128.6 1.0 1 168 97 288 97 289 0.91

Sequence Information

Coding Sequence
ATGCCAGAAGTGGATGAAATGGATATAGTGCGAACGGCGTTCCACGACCTTCAAGATAATAACAGTCTTTTTGGAAACGATGTTACCACAGTTCGGAATTTCCCCATGTTGAATACATACCTCACAAATACTACTATGGATTCTCAATGCTTCAGTAGCATCATGTCGCCAATGTCAATGTCTCTCTCACCTCAAACGGACGAATCGACATCAAACATGTTTcccatgaacgaggaaaatTTTATGACCTTAACAGCCACAACGGCAGAGGAAATGGCACCAGCTCGAGTAGTCATATTGGATCAGCCTGTCGATAAATTCAGATTcagatataagtctgaaatgATGGGAACACATGGATGTTTGTCCAGTGCAAGTTGCACTTCGAGAAGGAAGAGACAGGCTCCGACAGTAAAAcTTGAAGGTTTTGTGGGTCGAAGAGCCAAAATTCGTTGTACCCTTGTGACTTCGGATCCAGATAGAAGGATCCCTCATGCCCATCATTTAGTAAAACGAGAGGGCACCGTTGAGAATGATGGACCGTACGAAATCGAAGTCTCCGCGGAGAATAATTTCACAGCGCAGTTTCATGGTATGGGCATAATTCATACTGCGAAAAAACACATTAAGGACGAgctcgtgaaaaaaatgaagatcgaGGCACTCGAGAAGCATCGATGTTCCAATGTCAATATAACGAGTCTACGTGTTTCCGAAGAGACTCAGATCAAAATGGAAGCCGATGCTGCTCAAAAATGGATGAACCTGAACAGTGTTTCACTGTGCTTTCAAGCTTTCGTGGAAGGCCAAAATGGTATCATGAAACCCATTACGGAACCTGTTTATTCCATTTCTATCAATAATCTCAAGAGCGCTTTGACCGGAGAATTGAAAATCTGCCGAATTGACAAGTACTCGAGTCCGTGCGAAGGTGGCGAAGAAGTTTTTATGCTGGTCGAGAAGGTCGGCAAAAAAAACATCAGAGTCAAGTTTTTTGAAGTTGATGAGAACGATCATGAGATCTGGTCCAGTTACGGACGTTTCTCCGAATTGGACGTTCATCATCAATTCGCTATTGTATTCAGAACGCCTCGGTACGACCGTGAAATCAGTGCTCCGAAAGAGGTTTTCATAAAGCTTGAACGACCAACTGACGGAGATAGCTCGGAACCCATAAGGTTTACGTACAAGCCGAGTGATTATTTATTCAatAAAAAGCGTGCTCGGATTTCGTATTCCGGAAGTACGGATTTCAATAAATTCAAACAGACggaaaataatgtaaatataAATAGTTACTCGACACCAGCAAACGAGTCGATCAACAATTCCTCGAACGAATTTGCCAAATGGCTTCAGGACAATAACAAAATGCCATCCGAAGAATACGCTAAATTTCTCCACTCTATAGACATCGAGGGATACCAAGGTGCACTGGGTCCATCCGAGGACGATATGATGTTGACAACCGATGGAGTTTCCTCGCAAAATAATGAAGAGAATTTTGCGGAAAATTTGGTAcacgaaacaatgaaaaaaatacgagaagagccacagagagagaaggaacatttcataaaaatgttCGAAGAGCGCACGACTTACGGAGATACATTGTTGCATTCTGCACTTCGACACGGGCAACGCGATATCGTTAAGCTCATTCTCATGATTTCGGCAAAACATCCAGATTTTAAAAACGTTGTACACCTGAAAAATAGTTCTGGCAAGACGCCATTGCACTATGCAGTATTGTTAAATCAACCAGAAGTGGTACGGGCGCTGCTTGTTCTAGGCGCAAATGCAAACGAAAACGATGATCGTGATTTCTGTCCCCTTCACTACGCCGTCAAGAGAGCTGAAGCTGGTGCGTGTGTCGATGCATTATTGACGAAGGATGTAAATTTACGGGTTCGTGACGAAGCAGGGTGGACACCTTTGCAATTAGCGGCCGAAGCTGGATCGTTGCATGCCATTAAATCGCTAATCAAAGCTGGAGCAGATCCCGACGACTCCGAAGTATCGTACGGTCGGTCAGCTCTGCACATTGCGGTTGAAAACGGGCATATCGATATTGTCAAGTATCTTCTAGAAAAAACCAGAGTCGACGTCAATAAGACAAATTTGGGTGGAAATACGGCGTTGCACAGTGCCGTTGTAAATCCGAGTATGCGAGCAAAGGAAATGTGTAAAATTCTACTCGAACACGGTGCCGACCCTCGCATACCAAATAACAGCCGAGACATAATGGAAGAGaaaGATAATAAGGCATTGACCGTGAGTGTTAAGGAAGAAGTAGATTGTGACGACGACATGGGACAGGATGTTGGACAGACATCTTTTGATCTTGCGTCAAACAAGCCCGAGATCCTCCGTTTACTCACTCAAGCTACCGAAACAAATAACGCCGATGATCTCGATACGGtacaaataaaagaagaaattacGAATGTCGATACATTAACAAGTATCTTAGACGCTCACACGCTCGACAGATTAGCGGAAATTCTTGACAAGAATTGTAGTTGGAAGAAACTCGCGAGAAATCTTGAGTGCGACTACTTGTTGAGTACGCTTGACACGGACGAATCAAGCCCATCGTTAACTATTCTGAATTACGCTGACGTTCAAGGCAATCTTACGTTAAAAAACCTGCTGGACTCGCTGACGGAAATTGGCGACGAACAGGCTGCAAAATTCATCAAGGAGATTATGAGTCAGCCCAGCTCTAGTTAA
Protein Sequence
MPEVDEMDIVRTAFHDLQDNNSLFGNDVTTVRNFPMLNTYLTNTTMDSQCFSSIMSPMSMSLSPQTDESTSNMFPMNEENFMTLTATTAEEMAPARVVILDQPVDKFRFRYKSEMMGTHGCLSSASCTSRRKRQAPTVKLEGFVGRRAKIRCTLVTSDPDRRIPHAHHLVKREGTVENDGPYEIEVSAENNFTAQFHGMGIIHTAKKHIKDELVKKMKIEALEKHRCSNVNITSLRVSEETQIKMEADAAQKWMNLNSVSLCFQAFVEGQNGIMKPITEPVYSISINNLKSALTGELKICRIDKYSSPCEGGEEVFMLVEKVGKKNIRVKFFEVDENDHEIWSSYGRFSELDVHHQFAIVFRTPRYDREISAPKEVFIKLERPTDGDSSEPIRFTYKPSDYLFNKKRARISYSGSTDFNKFKQTENNVNINSYSTPANESINNSSNEFAKWLQDNNKMPSEEYAKFLHSIDIEGYQGALGPSEDDMMLTTDGVSSQNNEENFAENLVHETMKKIREEPQREKEHFIKMFEERTTYGDTLLHSALRHGQRDIVKLILMISAKHPDFKNVVHLKNSSGKTPLHYAVLLNQPEVVRALLVLGANANENDDRDFCPLHYAVKRAEAGACVDALLTKDVNLRVRDEAGWTPLQLAAEAGSLHAIKSLIKAGADPDDSEVSYGRSALHIAVENGHIDIVKYLLEKTRVDVNKTNLGGNTALHSAVVNPSMRAKEMCKILLEHGADPRIPNNSRDIMEEKDNKALTVSVKEEVDCDDDMGQDVGQTSFDLASNKPEILRLLTQATETNNADDLDTVQIKEEITNVDTLTSILDAHTLDRLAEILDKNCSWKKLARNLECDYLLSTLDTDESSPSLTILNYADVQGNLTLKNLLDSLTEIGDEQAAKFIKEIMSQPSSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00628880;
90% Identity
iTF_01057409;
80% Identity
-