Nvir011992.1
Basic Information
- Insect
- Netelia virgata
- Gene Symbol
- LAC
- Assembly
- GCA_951802705.1
- Location
- OX637866.1:10884646-10930236[+]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.023 2.4e+02 2.0 0.0 42 97 32 87 15 105 0.80 2 2 2.1e-07 0.0021 18.3 0.0 29 72 123 168 119 198 0.81
Sequence Information
- Coding Sequence
- ATGTTGGATATTCCTATTTTGATTAAGTGTCTCGGTGGCCTTGAGCCAAATTTCAAGGAGCCGATAAAAAACGAGACCGTGCCGGTCGGTCGTGAAGCCATTCTCGCTTGCCTCGTTCAGGACCTCGCCGTCTACAAAGTCGCATGGCTTAGGATCGACACTCAGACGATTCTCACAATAGGGACTCACGTAATAACGAAGAATCATCGGATAGCAGTGACGCACAGCGATCATCGTACGTGGTATCTTCACATACGAGAGGTCCGAGAAACTGATCGCGGATGGTACATGTGTCAGATAAACACGGATCCCATGAAAAGTCAAAACGGATATCTCGACGTTGTCGTGCCTCCTGACATAATCGACGATCAAACCAGCACGGACATGGTCGCGAGAGAAGGAAGCAACGTGACGCTTTCATGCGCCGCGACTGGGTCACCAGCACCCAACATAATCTGGCGGCGAGAGGATAATCAACAGATTCTCCTCGAAAATGGTCACAAAGAGAATACCGTCGAAGGTCCCAATTTCAACATCACAAAGGTGAATCGACTCCACATGGGACCGTATTTGTGCATAGCGTCGAATGGTGTTCCGCCGTCTGTTAGTAAAAGAATCAAGCTGATAGTGCAGTTTGCACCGATGATCTGGATTCAAAATCAGCTCGTTGGCGCTCGACTCGGTCAAGCTATGACCCTCGAGTGTCACTCAGAGGCTTATCCAAAATCTATAAACTACTGGACGAGAGATAAGAACGAAATAGTGGCACAAGGTGGAAAGTATGAAACGGAGTTGATCGACAACACGTACAAAGTTCGAATGAAATTGACGATACGCTCGGTGACGAAAGCCGATTACGGAGCGTACAAGTGCGTGTCTAGAAATTCACTAGGTGACACAGATGGTAGCATAAAGCTTTACGAAATACCTTCCTCGGCTGGGTCGTACTATACACACGTTAATGGAACTAAGTATAAAGgtaaattgaagaaaaacattggCAACAACATGCTCGAGGGAAATCAGGATAttccgaaagagagagACTTAAAGCTCCGTGGACGCAAGGACAACGGAGAGAatgaagacgacgaagatTACGAGGATTCCGGTACGTCGAGTACGAGAAGTTGTACCGTTAGCCAGCTCGTCTTGACGCTCGTAATTGCGTCACTGCTTTGCGTCAGTCATCACAATCATCATCATTCGCTGTTTGGAACGGTTCATTCGGCTTGA
- Protein Sequence
- MLDIPILIKCLGGLEPNFKEPIKNETVPVGREAILACLVQDLAVYKVAWLRIDTQTILTIGTHVITKNHRIAVTHSDHRTWYLHIREVRETDRGWYMCQINTDPMKSQNGYLDVVVPPDIIDDQTSTDMVAREGSNVTLSCAATGSPAPNIIWRREDNQQILLENGHKENTVEGPNFNITKVNRLHMGPYLCIASNGVPPSVSKRIKLIVQFAPMIWIQNQLVGARLGQAMTLECHSEAYPKSINYWTRDKNEIVAQGGKYETELIDNTYKVRMKLTIRSVTKADYGAYKCVSRNSLGDTDGSIKLYEIPSSAGSYYTHVNGTKYKGKLKKNIGNNMLEGNQDIPKERDLKLRGRKDNGENEDDEDYEDSGTSSTRSCTVSQLVLTLVIASLLCVSHHNHHHSLFGTVHSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01103313; iTF_01100353; iTF_00265437;
- 90% Identity
- -
- 80% Identity
- -