Ntho016077.1
Basic Information
- Insect
- Netelia thomsonii
- Gene Symbol
- klhl36
- Assembly
- GCA_964017225.1
- Location
- OZ024924.1:34086265-34088345[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.3e-07 6.3e-05 22.7 0.0 2 38 203 239 202 245 0.88 2 4 1.4e-10 6.8e-08 32.2 0.0 5 39 256 289 253 296 0.85 3 4 0.0038 1.9 8.4 0.0 7 33 310 335 306 340 0.86 4 4 8.2e-12 4.1e-09 36.1 0.2 5 38 368 401 367 406 0.95
Sequence Information
- Coding Sequence
- ATGTCGGCAACAATAGGGATAAACAGTCAACCTCATATCGAGGAGAGTTGCTGCTTCAAATGGACGGATTATCAGAATCATCTGTCGGACGTTGTCGGACAGCTTCTGGAGGAACAGTGCATGGTCGACGTAACCCTCGTTGCAGAAAGGGAACGTATACAAGCACATCGAATCGTATTGTGCTCTTGCAGTACTTTGTTTCAAGAAATATTGAGCCAGACGAACGATGAACATTCGACGATAATACTGACCGATATATCGGCACAGGACGTGCGTTCCATAGTTGAATTTAGCTATCATGGAGAAGTTAGAATTCCGGTTGAAAATATCAGCAATCTATTGGAGGCTGCTCACTCGCTCAAAATTTGCGGTCTTATGGAGatCGATGGCTTGGACGAGAACGATGCAATTATTAGTACAAAAGATATCGGCGAGGATGGCACGGATCCCCTGGCCGATTTCGAAGAATCTGGCGACAATACGACTGAATCTTTAGAGGAACAACTATCGTACAAAGATGTGAGGAGTAGTTGCGACGGTATGGACAGGGTTTCGTCCggtaaaaagagaaaacgtCGAAAGGAAGCTCCGAAACGAGAATACAACGAAGAGATGCTTGTATCGGCTATAAACGATGTTAGATCGGGTTGTACTCTCGTCGAGGCGGCCACAAGGAACAATATACCACGCTCGACGCTCTATATGAGAGCCAAGGCTCTTGGAATACAACTGAACGCTTCGAGAAACGAATATCCGGCTGAATGTATGAAAGCCGCGATAGACGCCGTTATCGCGGGTTTGAGTTTGCAGCACGCTTCCGAGAAATTTTTCGTACCTAAAACCGTACTTTGGCGACGTATACAGAAAGAGGGCTATCAGATATTACGCACGGAGGTCAAACGACCCTACGGTGCCGAGAAGAGAGAGGCGGCGGTTAAAGCTCTGCAAAGAGGCGAAAATCTTACAAAAGTTGCCCAAGAATTtcagaTACCGAAAACAACGTTGTTTCGCGACAAAGCGAAATTAGTGGACGAGGGCAAGTTACCAGAATCTTtttggaaaaaacgaaaaactggGGACGCGGCTGTAAAAAAATTACGTCTCGCAGAAGCGGTTGCGGCGTGTAAAGGTGGAAGAATGTCTCAAGCTGCCGCATCCATCGCATACAGTATACCTAAAACTACGATATGGCGAAGATTACAAGCGGATGGAAAAAATTCCGAGCGTAACGCAACCTTGAGAGATACGGAAGACGAAATTTGCGGCGACGACGATAAGAACGAGCAAAATTCTGCCGAATTTGCACTTTGCGAGGTACCATCGGAAATTCCTATAACATACATGGATCAAAATCTATCGGCAGATTCTGTGATAATATTGACAACGGAAGATGTAGAGGGTCTCAATCTAGGGGAGGGTAGACAGATAATTGTCAATCAAGATTGCGGTGAAGAATATGTTCCTTGCTCTATGAGTATATCCGACAACACTATGAGCTCCGACTATCAGACGGCGGAGAGTTAA
- Protein Sequence
- MSATIGINSQPHIEESCCFKWTDYQNHLSDVVGQLLEEQCMVDVTLVAERERIQAHRIVLCSCSTLFQEILSQTNDEHSTIILTDISAQDVRSIVEFSYHGEVRIPVENISNLLEAAHSLKICGLMEIDGLDENDAIISTKDIGEDGTDPLADFEESGDNTTESLEEQLSYKDVRSSCDGMDRVSSGKKRKRRKEAPKREYNEEMLVSAINDVRSGCTLVEAATRNNIPRSTLYMRAKALGIQLNASRNEYPAECMKAAIDAVIAGLSLQHASEKFFVPKTVLWRRIQKEGYQILRTEVKRPYGAEKREAAVKALQRGENLTKVAQEFQIPKTTLFRDKAKLVDEGKLPESFWKKRKTGDAAVKKLRLAEAVAACKGGRMSQAAASIAYSIPKTTIWRRLQADGKNSERNATLRDTEDEICGDDDKNEQNSAEFALCEVPSEIPITYMDQNLSADSVIILTTEDVEGLNLGEGRQIIVNQDCGEEYVPCSMSISDNTMSSDYQTAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01055887; iTF_01056177; iTF_01057554; iTF_01057779; iTF_01057022;
- 90% Identity
- iTF_01055887; iTF_01056177; iTF_01057554; iTF_01057779; iTF_01057022;
- 80% Identity
- iTF_01057022;