Basic Information

Insect: Nephrotoma guestfalica
Gene Symbol: -
Assembly: GCA_963691935.1
Location: OY829913.1:129101997-129103845[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 8.2e-06 0.0016 20.6 0.3 1 23 46 71 46 71 0.96

2 16 0.25 49 6.5 0.9 1 23 77 100 77 100 0.94

3 16 0.00014 0.027 16.8 0.1 1 23 119 141 119 141 0.96

4 16 1.9e-05 0.0037 19.4 0.5 1 23 148 170 148 170 0.96

5 16 0.012 2.3 10.7 0.3 1 21 176 196 176 197 0.94

6 16 0.36 71 6.0 0.1 1 23 202 224 202 224 0.91

7 16 4.7e-06 0.00093 21.3 1.5 1 23 229 251 229 251 0.98

8 16 0.00019 0.038 16.3 1.2 1 23 257 279 257 279 0.98

9 16 3.3 6.5e+02 2.9 0.4 2 19 285 302 284 307 0.77

10 16 1.6 3.1e+02 3.9 4.7 1 23 313 335 313 335 0.96

11 16 7.5e-05 0.015 17.6 2.9 1 23 345 367 345 367 0.98

12 16 0.00025 0.05 15.9 2.0 3 23 393 414 391 414 0.91

13 16 0.88 1.7e+02 4.7 0.9 1 23 419 443 419 443 0.92

14 16 0.0001 0.02 17.1 0.5 1 23 459 483 459 483 0.96

15 16 0.0038 0.75 12.2 1.5 1 21 488 508 488 509 0.93

16 16 0.087 17 7.9 0.3 2 21 522 541 521 542 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	8.2e-06	0.0016	20.6	0.3	1	23	46	71	46	71	0.96
2	16	0.25	49	6.5	0.9	1	23	77	100	77	100	0.94
3	16	0.00014	0.027	16.8	0.1	1	23	119	141	119	141	0.96
4	16	1.9e-05	0.0037	19.4	0.5	1	23	148	170	148	170	0.96
5	16	0.012	2.3	10.7	0.3	1	21	176	196	176	197	0.94
6	16	0.36	71	6.0	0.1	1	23	202	224	202	224	0.91
7	16	4.7e-06	0.00093	21.3	1.5	1	23	229	251	229	251	0.98
8	16	0.00019	0.038	16.3	1.2	1	23	257	279	257	279	0.98
9	16	3.3	6.5e+02	2.9	0.4	2	19	285	302	284	307	0.77
10	16	1.6	3.1e+02	3.9	4.7	1	23	313	335	313	335	0.96
11	16	7.5e-05	0.015	17.6	2.9	1	23	345	367	345	367	0.98
12	16	0.00025	0.05	15.9	2.0	3	23	393	414	391	414	0.91
13	16	0.88	1.7e+02	4.7	0.9	1	23	419	443	419	443	0.92
14	16	0.0001	0.02	17.1	0.5	1	23	459	483	459	483	0.96
15	16	0.0038	0.75	12.2	1.5	1	21	488	508	488	509	0.93
16	16	0.087	17	7.9	0.3	2	21	522	541	521	542	0.94

Sequence Information

Coding Sequence: atgaattattttagCCTTGTTACACTAAATCAAACCGAATCCGCAGAAGTCCCGACTGGTAGCAGTTATCCGAAAATGGACTTAAAGACAGCCACAAAATCgaagccaaataaaaataaaatatctaaacatCAATACGAGTGTAGAATCGAGGGCTGCGATAAATCATTCACCAGTGCTTCGGCTGTCAACAATCACATGAAACGAAAACATTTGGCTAAAAGTTTTTATCCGTGTGATGAATGTTCAGTAAACTTTACCATTCAACATGAGCGAAccttacacaaaataaaagagCACGAGGGGAGACGCTTCCAAATTTCACGATTCCAAACAAAAAAGGACAATTCCGAATATCCATGCCCTGAGTGCAGTAAAGTATTTTACACCCTCGACATGTTTGCCGAGCATCGCATTTTACATGATTCCACGATTATCAAGTACACGTGCAAGGATTGTGGCAAGGAATTTATATCGGagaaaaaactaaaagatcATTCAATTGTACACCAAGAACGAACCATGTATAAATGTAACGTTTGCGCAAAAGTATTCCTTCGTAGTCAAACGCTTCAATATCATCGATTAATTTGTAAAGCGGCATATCCATGTGATGAGTGTGTCGATAGTTTTATGACCGAGGAAGCCTTGGTTAAGCACAAAGTATTCCATGCGGCTGCGAATTTCACATGCAAGAAATGTAATAAAGTGTTTCCAAATCAGGAAACACTTTCGGTGCACGAGAAACGTCATTCACTTCGTATGAACTACACTTGCCAAATATGCAAGGAAACGATATCGACCCAagccaaatttcaaaaacatatcAAGGATCATTTGGAAATAAATCTTGAATGCCGAATTTGTAAGGAAAAATTTCAGAGTCTCGTCAAATATGGATACCACAAAGCGGAGATGCATTCAATTATGCGACCATACGATTGTGTCCTGTGTAGTGACAAATTTTGCACGAGAACCGAGCTTTTTCTTCATTTGCATAATCATATTGATATGAATACATCCACAAATATGTATCAATGTGAACATTGTGATATAAAATTTTCGCTCAAAGAAAATTACGAGAAACATCGCGATTCACATCGCAAAGATGAACTCGTTGTTTCCGAACCGCCGCTAATTCAGCAACCACTAGAAGATCAAACTTCTAATTTTGGGTGTAATCAGTGTGATAAAACCTTCAACTATAAATCTCTATTATCACATCACAAAATCGCTGAGCATGAATCCCGAGTTTATCCATGCACAATAGGATTTTGTGATCAAAAATTTATCACGCTTGAAGATTGTACCGAGCACCGGGCACAACATGACATTGATCCGAATTTAGATAGCGCGTCGGAGGATACGTTACCTTTTATATGTAATGTAGAAGGTTGCAGACGTTCTTTTGAATACGCGAGCCGTTTAAACAAGCATATGATGTCACACGTCCTGAATGAGTATAAATGCACCAAGTGCGATCGAATTTTCTACTCGCAATCCATATTCCAACAACATTACAATTTATGTGAAAGCAGCAACAGCAATCATTTCGGTCCGGTTAAATGTAGCATTTGTCGCCAACTGTTTGAAAATCCGACTGTGTTGCAgaatcatcgaaaattttgttgggaaaaTAGTAGCACGTTGAGCGAGGATAAAAGCGTTTTCTCTAATAATGATAGCGTTCAGAGTATTCATTCGATTGATAATTTACGTAGTCCGGAAAGTATTTTATCCGTTTATGTACAAAATGATTATGATTCAAATTTGCTTCCggaattttag
Protein Sequence: MNYFSLVTLNQTESAEVPTGSSYPKMDLKTATKSKPNKNKISKHQYECRIEGCDKSFTSASAVNNHMKRKHLAKSFYPCDECSVNFTIQHERTLHKIKEHEGRRFQISRFQTKKDNSEYPCPECSKVFYTLDMFAEHRILHDSTIIKYTCKDCGKEFISEKKLKDHSIVHQERTMYKCNVCAKVFLRSQTLQYHRLICKAAYPCDECVDSFMTEEALVKHKVFHAAANFTCKKCNKVFPNQETLSVHEKRHSLRMNYTCQICKETISTQAKFQKHIKDHLEINLECRICKEKFQSLVKYGYHKAEMHSIMRPYDCVLCSDKFCTRTELFLHLHNHIDMNTSTNMYQCEHCDIKFSLKENYEKHRDSHRKDELVVSEPPLIQQPLEDQTSNFGCNQCDKTFNYKSLLSHHKIAEHESRVYPCTIGFCDQKFITLEDCTEHRAQHDIDPNLDSASEDTLPFICNVEGCRRSFEYASRLNKHMMSHVLNEYKCTKCDRIFYSQSIFQQHYNLCESSNSNHFGPVKCSICRQLFENPTVLQNHRKFCWENSSTLSEDKSVFSNNDSVQSIHSIDNLRSPESILSVYVQNDYDSNLLPEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01455131;
90% Identity: iTF_01052524; iTF_01053684;
80% Identity: -