Basic Information

Insect: Nephrotoma guestfalica
Gene Symbol: -
Assembly: GCA_963691935.1
Location: OY829914.1:302017533-302021009[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00081 0.16 14.3 0.2 2 23 238 259 237 259 0.97

2 17 0.11 23 7.5 3.4 1 23 320 340 320 340 0.95

3 17 6.8e-05 0.013 17.7 1.3 2 23 347 369 347 369 0.97

4 17 0.00023 0.044 16.0 4.4 1 23 381 403 381 403 0.98

5 17 0.00032 0.063 15.6 1.1 1 23 409 431 409 431 0.99

6 17 1.5e-06 0.0003 22.9 1.1 1 23 437 459 437 459 0.98

7 17 0.00083 0.16 14.3 0.6 2 23 500 521 499 521 0.96

8 17 0.00019 0.037 16.3 2.3 1 23 682 704 682 704 0.97

9 17 0.021 4.1 9.9 0.4 1 22 710 731 710 733 0.89

10 17 3.8 7.5e+02 2.8 0.1 1 23 762 784 762 784 0.91

11 17 0.076 15 8.1 1.3 2 23 791 812 790 812 0.97

12 17 4.3e-05 0.0084 18.3 1.2 1 23 931 953 931 953 0.98

13 17 0.00044 0.086 15.1 3.5 1 23 959 981 959 981 0.96

14 17 2.7e-06 0.00053 22.1 0.9 1 23 987 1009 987 1009 0.98

15 17 9.8e-05 0.019 17.2 0.5 1 23 1021 1043 1021 1043 0.98

16 17 0.00011 0.021 17.1 1.9 1 23 1049 1071 1049 1071 0.98

17 17 6.3e-05 0.012 17.8 1.7 1 23 1077 1099 1077 1099 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00081	0.16	14.3	0.2	2	23	238	259	237	259	0.97
2	17	0.11	23	7.5	3.4	1	23	320	340	320	340	0.95
3	17	6.8e-05	0.013	17.7	1.3	2	23	347	369	347	369	0.97
4	17	0.00023	0.044	16.0	4.4	1	23	381	403	381	403	0.98
5	17	0.00032	0.063	15.6	1.1	1	23	409	431	409	431	0.99
6	17	1.5e-06	0.0003	22.9	1.1	1	23	437	459	437	459	0.98
7	17	0.00083	0.16	14.3	0.6	2	23	500	521	499	521	0.96
8	17	0.00019	0.037	16.3	2.3	1	23	682	704	682	704	0.97
9	17	0.021	4.1	9.9	0.4	1	22	710	731	710	733	0.89
10	17	3.8	7.5e+02	2.8	0.1	1	23	762	784	762	784	0.91
11	17	0.076	15	8.1	1.3	2	23	791	812	790	812	0.97
12	17	4.3e-05	0.0084	18.3	1.2	1	23	931	953	931	953	0.98
13	17	0.00044	0.086	15.1	3.5	1	23	959	981	959	981	0.96
14	17	2.7e-06	0.00053	22.1	0.9	1	23	987	1009	987	1009	0.98
15	17	9.8e-05	0.019	17.2	0.5	1	23	1021	1043	1021	1043	0.98
16	17	0.00011	0.021	17.1	1.9	1	23	1049	1071	1049	1071	0.98
17	17	6.3e-05	0.012	17.8	1.7	1	23	1077	1099	1077	1099	0.97

Sequence Information

Coding Sequence: ATGGAACGATATACATTGGCTATAAAGCaggaaaatgaatatgaaattACGGAAGGCGGTATTATCAATGGAAGCATTAGTGGCCTCGGCGAGAATATTACAATTGCCCAGTATGAAATCCAGCCGCATCAACAGATCCATCATGCTACAATGATGCTGCAACACCCTCAAATTATTATTCACCAGCAAAGGATATCACAGCAACATCACATACAGCAACCACAACAACACCATCATTTACAACAAATTCAACATATTACGCCATCGTCAACCCCAAATCATGTACAACATCACACGTTTCACATTCACAATGAAGAAGAGTCTAATGGTAGTAATTCcttattatatacaaataatacacATTCTCAGTGTACTACACCTcacatacaaatacaaattcatCGAGCAGATGGGAGTAGGCCAAATTCGGTTCAACATATACCCGCAGAATTGGTGCAGGTATCTACACCGATACAAGTTCAGTCAccactttatcaaaatcaacatcaacaGATTATTATTCATCAGCCAGTTACCACACTGGTAGGGGAACTTCCGCCACAAGAACTCGAAATAGCGCACCAGGAAGAGATTATCACTATACCAGCTCAAATAATACAGAAAATAGAATATCCAGAACTAACTATGGTTCAACAAGAGCAAGAAGAACAACAAGACTATCTACCACAAGACAATATCGACATTAACATCGTATGTAAAgtttgtaaagaaaattttgttggggTCGGAAACTTTACTGAACACATGAAGACGCATATGCCACACGAACAAATATTCGAAGAAGATCCAATGGGTACCACACGTATAGAAATGGTAGATTTATCGGAAACTCTGAATATGGATAAAAGTGCGTATCCTTGTGCCTTTTGTAATAAGAAGTACATCTGGCATAAATTCCTGGTGACGCATTCCAAATGTCATAAAACACTCGCACCATTTGTATGCACAATATGTGGCCaaagttttaattgtttatattacGACCATATGAAGACTCATATATTGAGTGAAGGGCGAACATGTTCCAAgtgtaatgaaaattttacaactttGAAGGCCCTAAAGCAACATGTTCGAACGGTGCACAATCCGCATCTTAGTGGAGATGCTGATCACCAGCATAAGTGTAGCATATGTGGAAAGCATTATAAAGCGTTATCATATCTCAAAGAACACGAACGAACGCATACGGGAGAGAAACCATATAAATGTGATGTTTGCGGGAAGGCGTTTGCAAAATATGGTTGCTGGGCCGAACACAAAAAGACGCATTCGATTGTTAAAGCCTTTAAGTGCCCTATGTGTCCGAAAGCCTTCACGAAACGAAGGTATCTGAAGGCACATCTGCTGAGGCATCCAAAAACCCTAGATCTCGATAAGATATTCGTCGAAGACCGGGATGGTGAGTTGCCTAGCAGGAAGTTTTTATTTGcaccaaataaatcaaaaccggCTCCAAAAGTGCAACCGAAATTGGAATGTCCGATATGTTATAAGGAATTTAAGAAGATGAGATATTTGCGATCTCACGTTATACGACATCCGGAAGATTTTGTTCGACAGAAACTTGGTTTGAAACCGGGAATGCCTATACCACCGTTATTGCCAGCAGTTTTAAACCGAAAAACCGCCATGATTACCGCGTCAGATAGTAATCAACAGGAGTTGACGAACATTCAGATAGAAACCAAACTTGAAATGACGTCCGAAGAAGAATCGACTGATGATGATGAGAATATTGGTGACGACGAGGATATTGGTGCTGGTTTGGAAAAAGGGGAACTCAAAACGGATATTGCTTTCGAAGagaataatttctttaataacgAGGGATTTAACGAAGAAGCAGAAGAGTTTGATGAAAATGAGGTAAAACAACAAATTCCAAGCCCAGAGGAAATCAATAACGCCCCTACACATGATACTAGTAATAATAATACTGAGATAGttgataataatataaaacccACAGTTGAAGAAATTTCATCAAATCAACCAGACGCGTCTGTTGAGCCAACCATATTTTGTTGTAGTGTGTGTCAAAAGTCGTTCAACCAAGCCAAGTTACTACGAGACCACGAACAAGTTCATTATGGCGAATATCCCTACAAGTGCAGCTATTGTAATACGGCGTTTGTGATGTGGGCCCGTTACGAGGATCATGTGACTTTTGAACACAGTGATTACCCGTTTCCCTCAGAAGTGGACgaagagaaaaaattaaaaagccttGGACGATACTTTAATACCGAGGAAAAATCGTTTACATGTAGAACATGCGGggatacatttttaaatgaacCTATGCTAGAGGAGCACGAGGATATGCATTTAGGTGAAGAACCGTTAAAATGTCGGGTGTGTGGTGAACATTTTGCAATTCAATTGAAGTATTCTGAACATTTAAAAACCCACGGTGACCAAGAAGAATCGTTTGAAAATGTGGGCGAAGGGGAGTGCGATGGagaaaatgtaattaagaaCGAATTCGAAATTAAAAGCAGTGGGAATGACGCAAGTGAACACAATATAAAAGAAGGGCGAGTGCTGCGAAGTCGAAccaataaacgaaaatatttacgtAATCATCGGATACGGAGGTCACGACGAACGGCTCGGAAGAAACTGAAAAAAGTAGAGCAATCAGGAGAAGATGAAAGTAGTGATGACAACCAGGATGAAAAGAAAGAAGTTCGGAAGGAACAAAGAGGAAATGATGAAATCGAATTTAAGGAAAAAGAAGAGGTCaaagaaaattccaaaaaacgttttaaatgtaaaatttgcgGTAAACTTTATACAACTTTGTTCTATCTAAAAGAACATATATCGATTCATTCTGGGAACCGTCCTCACAAATGCAAAATATGTGGGAAAACATTTGCTGCCTCGTCATGTTATCGAGAACATTTAGAATTGCATTCTTCGCAGAAGAATCATAAATGTGACGTGTGTGGTATGACCTTTGCTGTGGCCCGATATTTAAAAGCCCATATGCGGAGGCATGCCCAAAAAACTCTCCCGGATGGGGGTAAAAAATATAACTGCCCGCAATGTGAGAAAAAGTACCAATCTAAGACGGCGTTAGTGGAGCATATGAAGATTCATACAGGTGAAGCGCCATTTACATGTACTTACTGTGGTAAAATTTTTATGCTCACTTCATCGTTTCGGGATCACATGCTTAAACATGAAAACGTAGAAATGCATCAGTGCCCATTCTGTccaaaaagttttataaaagcGCGTTACTTACAACAGCATTTGGTCAGGCACATTCAAAAACTGGATACCGAAGATAATATAGATCTGGCAGCTAATTTAAAGAATAATGACACCACAGCTCAAATTGATCACCAGTTCGAGGATAGCACTAGTAGCAGTAGTGATACTGACTCTGaagatgaattttttaaaacgccGCCGCCGCCCGCAGATGATCAAACACTTgtgtaa
Protein Sequence: MERYTLAIKQENEYEITEGGIINGSISGLGENITIAQYEIQPHQQIHHATMMLQHPQIIIHQQRISQQHHIQQPQQHHHLQQIQHITPSSTPNHVQHHTFHIHNEEESNGSNSLLYTNNTHSQCTTPHIQIQIHRADGSRPNSVQHIPAELVQVSTPIQVQSPLYQNQHQQIIIHQPVTTLVGELPPQELEIAHQEEIITIPAQIIQKIEYPELTMVQQEQEEQQDYLPQDNIDINIVCKVCKENFVGVGNFTEHMKTHMPHEQIFEEDPMGTTRIEMVDLSETLNMDKSAYPCAFCNKKYIWHKFLVTHSKCHKTLAPFVCTICGQSFNCLYYDHMKTHILSEGRTCSKCNENFTTLKALKQHVRTVHNPHLSGDADHQHKCSICGKHYKALSYLKEHERTHTGEKPYKCDVCGKAFAKYGCWAEHKKTHSIVKAFKCPMCPKAFTKRRYLKAHLLRHPKTLDLDKIFVEDRDGELPSRKFLFAPNKSKPAPKVQPKLECPICYKEFKKMRYLRSHVIRHPEDFVRQKLGLKPGMPIPPLLPAVLNRKTAMITASDSNQQELTNIQIETKLEMTSEEESTDDDENIGDDEDIGAGLEKGELKTDIAFEENNFFNNEGFNEEAEEFDENEVKQQIPSPEEINNAPTHDTSNNNTEIVDNNIKPTVEEISSNQPDASVEPTIFCCSVCQKSFNQAKLLRDHEQVHYGEYPYKCSYCNTAFVMWARYEDHVTFEHSDYPFPSEVDEEKKLKSLGRYFNTEEKSFTCRTCGDTFLNEPMLEEHEDMHLGEEPLKCRVCGEHFAIQLKYSEHLKTHGDQEESFENVGEGECDGENVIKNEFEIKSSGNDASEHNIKEGRVLRSRTNKRKYLRNHRIRRSRRTARKKLKKVEQSGEDESSDDNQDEKKEVRKEQRGNDEIEFKEKEEVKENSKKRFKCKICGKLYTTLFYLKEHISIHSGNRPHKCKICGKTFAASSCYREHLELHSSQKNHKCDVCGMTFAVARYLKAHMRRHAQKTLPDGGKKYNCPQCEKKYQSKTALVEHMKIHTGEAPFTCTYCGKIFMLTSSFRDHMLKHENVEMHQCPFCPKSFIKARYLQQHLVRHIQKLDTEDNIDLAANLKNNDTTAQIDHQFEDSTSSSSDTDSEDEFFKTPPPPADDQTLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01458865;
90% Identity: iTF_01052500; iTF_01053667;
80% Identity: -