Basic Information

Insect: Nephrotoma flavescens
Gene Symbol: -
Assembly: GCA_932525705.1
Location: CAKOBH010000658.1:1307828-1314299[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00086 0.16 14.2 0.2 2 23 238 259 237 259 0.97

2 17 0.22 39 6.7 3.4 1 23 320 340 320 340 0.94

3 17 7.2e-05 0.013 17.6 1.3 2 23 347 369 347 369 0.97

4 17 0.00024 0.043 16.0 4.4 1 23 381 403 381 403 0.98

5 17 0.00019 0.034 16.3 1.1 1 23 409 431 409 431 0.99

6 17 1.6e-06 0.0003 22.8 1.1 1 23 437 459 437 459 0.98

7 17 0.00088 0.16 14.2 0.6 2 23 500 521 499 521 0.96

8 17 3.9e-05 0.007 18.5 0.7 1 23 681 703 681 703 0.97

9 17 0.022 4 9.8 0.4 1 22 709 730 709 732 0.89

10 17 4 7.3e+02 2.7 0.1 1 23 761 783 761 783 0.91

11 17 0.15 27 7.2 0.8 2 23 790 811 789 811 0.96

12 17 4.5e-05 0.0081 18.3 1.2 1 23 929 951 929 951 0.98

13 17 0.00046 0.084 15.1 3.5 1 23 957 979 957 979 0.96

14 17 2.8e-06 0.00051 22.0 0.9 1 23 985 1007 985 1007 0.98

15 17 0.0001 0.019 17.1 0.5 1 23 1019 1041 1019 1041 0.98

16 17 0.00011 0.02 17.0 1.9 1 23 1047 1069 1047 1069 0.98

17 17 6.6e-05 0.012 17.7 1.7 1 23 1075 1097 1075 1097 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00086	0.16	14.2	0.2	2	23	238	259	237	259	0.97
2	17	0.22	39	6.7	3.4	1	23	320	340	320	340	0.94
3	17	7.2e-05	0.013	17.6	1.3	2	23	347	369	347	369	0.97
4	17	0.00024	0.043	16.0	4.4	1	23	381	403	381	403	0.98
5	17	0.00019	0.034	16.3	1.1	1	23	409	431	409	431	0.99
6	17	1.6e-06	0.0003	22.8	1.1	1	23	437	459	437	459	0.98
7	17	0.00088	0.16	14.2	0.6	2	23	500	521	499	521	0.96
8	17	3.9e-05	0.007	18.5	0.7	1	23	681	703	681	703	0.97
9	17	0.022	4	9.8	0.4	1	22	709	730	709	732	0.89
10	17	4	7.3e+02	2.7	0.1	1	23	761	783	761	783	0.91
11	17	0.15	27	7.2	0.8	2	23	790	811	789	811	0.96
12	17	4.5e-05	0.0081	18.3	1.2	1	23	929	951	929	951	0.98
13	17	0.00046	0.084	15.1	3.5	1	23	957	979	957	979	0.96
14	17	2.8e-06	0.00051	22.0	0.9	1	23	985	1007	985	1007	0.98
15	17	0.0001	0.019	17.1	0.5	1	23	1019	1041	1019	1041	0.98
16	17	0.00011	0.02	17.0	1.9	1	23	1047	1069	1047	1069	0.98
17	17	6.6e-05	0.012	17.7	1.7	1	23	1075	1097	1075	1097	0.97

Sequence Information

Coding Sequence: ATGGAACGATATACATTGGCGATAAAGCAGGAAAATGAATATGAAATTACGGAAGGCGGTATTATCAATGGAAGCATTAGTGGTCTCGGCGAGAATATTACAATTGCCCAGTATGAAATCCAGCCGCATCAACAGATCCATCATGCTACAATGATGCTGCAACACCCTCAAATTATTATTCACCAGCAGAGGATACCACATCAACATCACATACAGCAACCACAACAACACCATCATTTACAACAAATTCAACATATTACGCCATCGTCGACCCCAAATCATGTACAACATCACACGTTTCACATTCACAATGAAGAAGAGTCTAATGGTAGTAATTCCTTATTATATACAAATAATACACATTCTCAGTGTACTACGCCTCACATACAAATACAAATACATCGAACAGATGGGAGTAGGCCAAATTCAGTGCAACATATACCCGCGGAATTGGTGCAGGTATCTAGTCCGATACAAGTTCAGTCACCACTTTATCAAAATCAACATCAGCAGATTATTATTCATCAGCCAGTTACTACACTGTTAGCGGAACTCCCGCCACAAGAACTTGAAATAGCGCACCAGGAAGAGATTATCACTATACCAGCTCAGATAATACAGAAAATAGAATATCCAGAATTAACTATGGTTCAACAAGAGCAGGAACAAGAACAAGACTATCTGCCACAAGAGAATATCGACATTAACATCGTATGTAAAGTCTGTAAAGAAAATTTTGTTGGGGTCGGAAACTTTACTGAACACATGAAGACACATATGCCACACGAACAAATATTCGAAGAAGATCCAATGGGTACCACACGTATAGAAATGGTAGATTTATCGGAAACCCTGAATATGGATAAAAGCGCGTATCCTTGTGCCTTTTGTAATAAGAAGTACATCTGGCATAAATTTCTGGTGACGCATTCCAAATGTCATAAAACGCTCGCACCATTTATATGCACAATATGTGGCCAAAGTTTTAATTGTTTATATTACGACCATATGAAGACTCATATATTGAGTGAAGGGCGGACTTGTTCCAAGTGTAATGAGAATTTTACAACTCTGAAGGCCCTAAAGCAACATGTTCGAACGGTGCACAATCCGCATCTTAGTGGAGATGCTGATCACCAGCACAAGTGTAGCATATGTGGAAAGCATTATAAAGCGTTATCATATCTCAAAGAACACGAACGAACTCATACGGGTGAGAAACCCTATAAATGTGATATTTGTGGGAAGGCGTTTGCAAAATATGGTTGCTGGGCCGAACACAAAAAGACACATTCGATTGTTAAAGCCTTTAAGTGCCCTATGTGTCCGAAAGCCTTCACGAAACGAAGGTATCTGAAGGCACATCTGCTGAGGCATCCAAAAACCCTAGATCTCGATAAGATATTCGTCGAAGACCGGGATGGTGAGTTGCCTAGCAGGAAGTTTTTATTTGCACCAAATAAATCAAAACCCGCTCCAAAAGTGCAGCCGAAATTGGAATGTCCAATATGTTATAAGGAATTCAAGAAGATGAGATATTTGCGATCTCACGTTATTCGACATCCGGAAGATTTTGTTCGACAGAAGCTTGGTTTGAAACCCGGAATGCCTATACCACCGTTATTGCCGGCAGTTTTAAACCGAAAAACCGCCATGATCACCGCGTCAGATAGTAATCAACAGGAGTTGACAAACATTCAGATAGAAACAAAACTTGAAATGTCGTCCGAAGAAGAATCGACTGATGAAGATGAGAATATTGGCGACGACGAGGATATTGGTGCTGGTTTAGAAAAAGGGGAACTCAAAACAGATATTGATTTCGAAGAGAACAATTTCTTTAATAACGAGGGATTTAACGAAGCAGAAGAGTTTCATGAAAATGAGGTAAAACAACAAATTCCAAGTCCAGAGGAAATCAATAACGCACCTACACAAGATACCAGTAATAATAATACTGAGATAGTGGACAATAATATAAAACCCACAGTCGAAGAAATTTCATCAAATCACCCAGACGCGTCTGTTGAGCCAACCATATTTTCTTGTAGTGTGTGTCAAAAGTCATTCAACCAAGCGAAGTTACTACGAGACCACGAACAAGTGCATTATGGTGAATATCCCTACAAGTGCAGCTATTGTAATACGGCGTTTGTAATGTGGGCCCGTTATGAGGATCATGTGACTTTTGAACACAGTGATTACCCGTTTCCCTCAGAAGTAGACGAAGAGAAAAAATTAAAAAGCCTTGGACGATACTTTAATACCGAGGAAAAATCGTTTACATGTAGAACATGCGGCGATACATTTTTAAATGAACCTATGCTAGAGGAGCACGAGGATATGCATTTAGGCGAAGAACCTTTAAAATGTCGGGTGTGTGGTGAACATTTTGCAATTCAATTAAAGTATTCTGAACATTTAAAAATTCACGGCGACGAAGAAGAATCGTTTGAAAATGTGGGCGAAGGAGAGTGCGATGGAGAAAATGTAATTGAGAACGAGTTCGAACTTAAAAGTGTGACCGACACAAGTGAACAGAATAGCAAAGAAGGACGAGTGCTGCGAAGTCGAACCAATAAAAGAAAATATTTACGTAATCATCGGATACGGAGGTCAAGACGAATGGCTCGGAAGAAACTGAAAAAAGTTGGGAAATCAGGAGAAGATGATAGTAGTGATGACAACCAGGATGAAAAGAAAGAAGTTCAGAAGGAACAGAGAGGGAATGACGAAATCGAATTTAAGGTAAAAGAAGAGGTCAAAGAGAATTCCAAAAAACGTTTTAAATGTAAAATTTGCGGTAAACTTTATACAACTTTGTTCTATCTAAAAGAACATATATCGATTCATTCTGGGAACCGTCCCCACAAGTGCAAAATATGTGGGAAAACATTTGCTGCCTCGTCATGTTATCGAGAACATTTAGAATTGCATTCTTCGCAGAAGAATCATAAATGTGACGTGTGTGGTATGACCTTTGCTGTGGCCCGTTATTTAAAAGCCCATATGCGAAGGCATGCCCAAAAGACTCTCCCGGATGGTGGTAAAAAATATAACTGCCCGCAATGTGAGAAAAAGTACCAATCTAAGACAGCGTTAGTGGAGCACATGAAGATTCACACGGGTGAAGCACCATTTACATGTACTTACTGTGGTAAAATTTTTATGCTCACTTCATCATTTCGGGATCACATGCTTAAACATGAAAACGTAGAAATGCATCAATGCCCATTCTGTCCAAAAAGTTTTATAAAAGCGCGTTATTTACAACAGCATTTGGTCAGGCACATCCAAAAATTGGATACCGAAGATAATATAGATCTGGCAGCTAATTTAAAGAATAATGACACCAAAGCTCAAATTGATCACCAGTTCGAAAATAGCACTAGTAGCAGTAGTGATACTGACTCTGAAGATGAATTTTTTAAAACACCACCGCCGCCCGCAGATGATCAAACACTTGTGTTTATCCGCAACCGTGCGGATAATCCATATCATGAGGATAATCCACATAATGCGGATAATCCGCACAATGTGGATAATCCGCACAATGCGGATATGATTTCTAAATCCGCATCCGCCCTCATCCGCCAGAAATTAATGCGGATATTACTATCCGATGCAGGGCACTAG
Protein Sequence: MERYTLAIKQENEYEITEGGIINGSISGLGENITIAQYEIQPHQQIHHATMMLQHPQIIIHQQRIPHQHHIQQPQQHHHLQQIQHITPSSTPNHVQHHTFHIHNEEESNGSNSLLYTNNTHSQCTTPHIQIQIHRTDGSRPNSVQHIPAELVQVSSPIQVQSPLYQNQHQQIIIHQPVTTLLAELPPQELEIAHQEEIITIPAQIIQKIEYPELTMVQQEQEQEQDYLPQENIDINIVCKVCKENFVGVGNFTEHMKTHMPHEQIFEEDPMGTTRIEMVDLSETLNMDKSAYPCAFCNKKYIWHKFLVTHSKCHKTLAPFICTICGQSFNCLYYDHMKTHILSEGRTCSKCNENFTTLKALKQHVRTVHNPHLSGDADHQHKCSICGKHYKALSYLKEHERTHTGEKPYKCDICGKAFAKYGCWAEHKKTHSIVKAFKCPMCPKAFTKRRYLKAHLLRHPKTLDLDKIFVEDRDGELPSRKFLFAPNKSKPAPKVQPKLECPICYKEFKKMRYLRSHVIRHPEDFVRQKLGLKPGMPIPPLLPAVLNRKTAMITASDSNQQELTNIQIETKLEMSSEEESTDEDENIGDDEDIGAGLEKGELKTDIDFEENNFFNNEGFNEAEEFHENEVKQQIPSPEEINNAPTQDTSNNNTEIVDNNIKPTVEEISSNHPDASVEPTIFSCSVCQKSFNQAKLLRDHEQVHYGEYPYKCSYCNTAFVMWARYEDHVTFEHSDYPFPSEVDEEKKLKSLGRYFNTEEKSFTCRTCGDTFLNEPMLEEHEDMHLGEEPLKCRVCGEHFAIQLKYSEHLKIHGDEEESFENVGEGECDGENVIENEFELKSVTDTSEQNSKEGRVLRSRTNKRKYLRNHRIRRSRRMARKKLKKVGKSGEDDSSDDNQDEKKEVQKEQRGNDEIEFKVKEEVKENSKKRFKCKICGKLYTTLFYLKEHISIHSGNRPHKCKICGKTFAASSCYREHLELHSSQKNHKCDVCGMTFAVARYLKAHMRRHAQKTLPDGGKKYNCPQCEKKYQSKTALVEHMKIHTGEAPFTCTYCGKIFMLTSSFRDHMLKHENVEMHQCPFCPKSFIKARYLQQHLVRHIQKLDTEDNIDLAANLKNNDTKAQIDHQFENSTSSSSDTDSEDEFFKTPPPPADDQTLVFIRNRADNPYHEDNPHNADNPHNVDNPHNADMISKSASALIRQKLMRILLSDAGH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01458865;
90% Identity: iTF_01054596;
80% Identity: -