Ngue022128.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nephrotoma guestfalica
Gene Symbol
PAXBP1
Assembly
GCA_963691935.1
Location
OY829914.1:24131983-24136154[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.4e-34 1.9e-29 105.0 0.1 1 272 652 863 652 865 0.93

Sequence Information

Coding Sequence
ATGAGTTTATTCCGTAAACCAAAAAAGCCTATACAACGTCGTGTTTTTAGTGGGTACAGCGATGAGGAAGATATCGAAAATAATGATACTGCAGTGGGCAGTGGTAATCAAACGCATCGGGATGAGAAAATGCAGATAGATGATCATGGAGGACACGAGAAATCGAATTCACATTCATCCAGTAGGGAACGTAATAAAAAGGATAAGAAAAGTAGCAGTAGTAGTAGTGCAAATCATAATAGTGGTGGTGGTGGAAGTTCCAGTACCAGCACCAGTGTCAAAGATAAACCCCAAAACACTGCCGCAAAGACATCTTTATTAAGTTTTGATGATGAAGAGGAAGGTGAAGTATTTCAAGTAAAAAAGTCATCGCATAGCAAAAAAGTGATGAAAATGCTCGATAAAGAACGCAGAAAGAAAAAACATCATAAATCATCAAATTCGGAGCGTTACGATACAAGTAACAACAACGGCAATAGTAATGTATCGTTGACGCAAGGTTATCACAGATCGTCGTCACACAGTTCCACTGGAAAAAGCggtgtcgataatcattttaatGATTTACAGGAATCtgatacaaataataaatttattaaacggaataaaaatgaaaattctaattctaatgTACAAACAGAAATTCGCACAGACGACTTTGTGCTGGTTGTTAAAAACACGGAACCTGAAAATCTAATCCTAAATGGCCGTGCTGCATTATGTGCTGGACGTGATGACATGTCATCCGAAGATGACGATGTTGAAAGTGAGATTGAAATTAAACATCCTGCCAGTGCGCATAAATTTAATCATcccgataattttaaaatggtactCGAAAGTGGTGCCATACCAGATGCCGCTATGATCCATGCAGCACGAAAGCGTCGACAAGAGGCCCGGGAGCAAAATGAATTTATTCCAATCGATGAACCGCAACAGGATAAGAAAAATACTCGTTTAATACGCGATGACGGTGAGGATGATGGTTCAGATGAAGAGGAAAGGGTTGACATGTCTGCAATAACGGGCGTTAAAGAGCGTGAAGAAAGGCGTGAGCAATTTTACTCAGCCCAACAAGAATATTCCGGCGAAGAATCGGATCCCGGTATGAATGAAtgggaaaatcaacaaattcgaAAAGGTGTGACGGGAGCTCAATTGGTTACGGCACAACAAGAATCCGTATTTTCACAGTTCATGATTCAACCATCTATTTCGTCGCTATCCAATGATCATGATAGTTTACTTTCAACTGGGGCACTTTTAGAACAGGCTTACGCTAAAGGTTGCCTAGAAAAACCGCGTCAAGTTTTAATTTCCACACAACTCAATGAACAAAAGCCAACTGGACCACGAATGCCCGCCGaagtattacaaaatttacgTGATCGTCTCGTTAAGCTTAacgaaattaatcaaaaacattATGATGATATTGAACGCTTGACGCGAGAGATGAAATTGGCCGAGATCGAGGAAATTGATTGTGAGCATAAAGCCCCCGTGGCGGCCGCAAAATATCGTTTTTATCAGGAGATGAAGTGCTACATATCGGATTTAGTCGAATGCTTTGATGAAAAATTACCCATGATATGTGAGCTGGAGAAGCGCGCTATAGCTCTTATGGCTAAACGGACATTATTGTTTGTTGAGCGTAGACGACAAGATGTTCGGGATCAAGCAAAGGAGATGACCGATCAGTCGAAGCCCGGTATTCGTAAAGGTGGTGATGATGAAGAACACACTCGCCGTGCAGCAGAACGTGAAGGTCGCCGAACAAGACGTCGACGAGATCGAGAGCGCAATGAACTAAGTGAAACCCATTTAGATGGCATGTCAAGTGATGATGAAATAGCTGATCATGAAGTAACcacatacaaaacaaatttagatCAAATCCAACTGGAATCCGATGAGGTATTCAGTGATGCGTCCGAAGAATTTTATCAAATCGatgaaattctaaataaattcgaGGAATGGAAGAAATTCGATTTTGATTCATACAAAGAagcgtacgtaacaatttgtcTACCGAAAATTATTGGACCGATAATTCGGTTAAAATTAGTCACATGGTCCCCGTTAACCGAAATCTCAGtcgatatagaaaaaatgttatggTATAACATTGTGATGAAGTACGGTTATAATATGAATGAAACGGAACATCAATTGGCAGCCGATCCTGATGTCCGATTCGTTCCATCGATCATTGAGAAAATAATCTTACCAAAAATTACCgaacatattgaaaattgttggGATCCGTTGTCGACTACACAGACATTAAAATTGGTTGGTTTAATAGGCCGGCTTGGGCGAGACTATCCATCGCTGAGGCCCTCTTCTAAAACGCTTAAAACACTGTTTATAGCAATtctagataaaattaaattagcgcTCGACAACGATGTATTTATTCCGATATTTCCAAAATATATGCAAGAGGCAAAATCTTCGTTCTTTCAGCGGCAATTTTGTAGTGGACTGAAGCTTTTTAGAAACTTTATAAGTTGGCAAGGTATTTTATCAGACAACGTTCTGAAAGAAATCGCGCTTTTGTCCCTTCTCAATCGGTACCTACTATCGGCAATGCGGGTATGCACTCCGTTGGATGCGATCGCTAAGGCATCGattattgtaaatacaattcCACGAGTATGGTTGCATCCGGATACTGGCGTGCTCGAGAGCTTGGAAatgtttattgcatttttaaagaatatttcgAATAGTTTAGATAAGAAAAATTCGAGTCATTTAGAATCTATTGAGAAAATTTCAGCAATTTTATTAAGACTTCATGCAACTCtataa
Protein Sequence
MSLFRKPKKPIQRRVFSGYSDEEDIENNDTAVGSGNQTHRDEKMQIDDHGGHEKSNSHSSSRERNKKDKKSSSSSSANHNSGGGGSSSTSTSVKDKPQNTAAKTSLLSFDDEEEGEVFQVKKSSHSKKVMKMLDKERRKKKHHKSSNSERYDTSNNNGNSNVSLTQGYHRSSSHSSTGKSGVDNHFNDLQESDTNNKFIKRNKNENSNSNVQTEIRTDDFVLVVKNTEPENLILNGRAALCAGRDDMSSEDDDVESEIEIKHPASAHKFNHPDNFKMVLESGAIPDAAMIHAARKRRQEAREQNEFIPIDEPQQDKKNTRLIRDDGEDDGSDEEERVDMSAITGVKEREERREQFYSAQQEYSGEESDPGMNEWENQQIRKGVTGAQLVTAQQESVFSQFMIQPSISSLSNDHDSLLSTGALLEQAYAKGCLEKPRQVLISTQLNEQKPTGPRMPAEVLQNLRDRLVKLNEINQKHYDDIERLTREMKLAEIEEIDCEHKAPVAAAKYRFYQEMKCYISDLVECFDEKLPMICELEKRAIALMAKRTLLFVERRRQDVRDQAKEMTDQSKPGIRKGGDDEEHTRRAAEREGRRTRRRRDRERNELSETHLDGMSSDDEIADHEVTTYKTNLDQIQLESDEVFSDASEEFYQIDEILNKFEEWKKFDFDSYKEAYVTICLPKIIGPIIRLKLVTWSPLTEISVDIEKMLWYNIVMKYGYNMNETEHQLAADPDVRFVPSIIEKIILPKITEHIENCWDPLSTTQTLKLVGLIGRLGRDYPSLRPSSKTLKTLFIAILDKIKLALDNDVFIPIFPKYMQEAKSSFFQRQFCSGLKLFRNFISWQGILSDNVLKEIALLSLLNRYLLSAMRVCTPLDAIAKASIIVNTIPRVWLHPDTGVLESLEMFIAFLKNISNSLDKKNSSHLESIEKISAILLRLHATL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01457342;
90% Identity
iTF_01459692;
80% Identity
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