Ngue026653.1
Basic Information
- Insect
- Nephrotoma guestfalica
- Gene Symbol
- -
- Assembly
- GCA_963691935.1
- Location
- OY829914.1:78329149-78331575[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-11 1.3e-07 33.1 0.0 2 35 10 44 9 48 0.94
Sequence Information
- Coding Sequence
- atgccaAGAAAAAGAGACACATTTGAAGAAGACCAGGTTCAAAAGGCTTTAGGTGAAATAAGAAACGGCCAAATTAGTAAAAAGGAGGCagccaaaaaatataatgtgCCTAGATCAACGCTTCAATTTCGATTAGGGTCGAATTTTTCTAAAGCTCGACCAGGCCCACCAACAATCCTAACCGAAGAAGAAGAGCAACGCATTGTTGAATGGATAAAAATTTCCCAACAAAAACGATTCCCGAAGCGAAACGAGGATGTTGTTACAGCAGTAAAAGAATTTTTAGAAGATACTGATAGACCTCATCCATTTGGTGAGAACAAAATTCCAGGAAAGGGTTGGTTTAAAGCTTTTTTAAAACGACATCCGTCTCTATCGATTCGAGCTAGTGATCCTGTTTCGGCAGCAAGTGCTACAGTTGCTGCTTCAGATATTTATTCATGGTTCGatacaatagaaaattttttaaaagatcaCGACTATTATGATATATTAGAAGATCCAACACGAATTTTTAACGGAGACGAgacgaattttcttttatgtccTAAAACTAAAAACGTTTTAGCAGCGAAAGGCTCTCGAAATGTATACGAAATTGACAAAGGATCGGCCAAAGCAAATTTAACGGTCATGTTTACCTTTTCTGCTGCCGGAGTGTTAACCCCTCCCATGATAATCTACCCATATAAAAGAATACCGGAAGAAATTCGTAAATCGTTGCCTAAAGGATGGGGAATTGGAATCAGTGACAACGGGTGGATGACAAAACAAGtattttacgagtatatatcaaAGGTTTTGCATTCGTATTTAGTGCAGCTGGGCACTAAAATTCccgttgtatattttgttgacgGGCACTCAACCCATCTAACGTTACCTGTGAGTGAGCTGTGTGTGAAActgcaaattattttagtagCATTATATGCAAATGCTACTAGAATATTACAGCCCGCTGATGTTGCAGCATTCAAACCGTTGAAAACGTCTTGGAATCGGAAAGTTTTAGAATGGCAACGTAATAATCTTAGTGCCTCTttaactaaagaaaaatttgcaCCATTATTATATGATGTTGTGGAAAGTACTGTGTGTAAAGAGACTATTCAGAAGGGCTTCAAGGCATGTGGCCTCTTTCCATTCaacaaatttgcaattaatttatcgaaatgCTTAGGAAGATCATCGTCTAAATCTACATATGGCAGTCGACTAAATCCCAAATCACCGGACGATGGATTTCAAACGCTGTGTGAAGCAATCGGTgataacaaaattcaactattCGAAAATATCGACCGAGGTGAACTTCAAAAAGATAGCTTCAACGaatatttcgtaattttatatgatttatataaCAAGTTTAAAttcaaaggaaaattaaatctaaGTGTTTCAGATAAATCAACACAAACGCACGTTGAATATCAGAATATAGAAACCTCAGAAATAGACATCAGTGCCAtcgatgaattttttataattcaagaTTCGCCAAGTacggcaaattacgaaattataaatatttccaatgTCATTCCCATTCAACAGTCCACAGAACTACAAACAGTGACATACATAACTGTTCCTCCGCAAAGCACTACGGCAATAATTGATGATTTCCTACCTTGGCCAGAGACTCCCTTGAGAAAAGGTTGCAAAACGGACACAATTAAAAAGCCATATGTGGTTACTTCTCCGCTGTGGATAAAACAAGCACAACTAAAAAAAgatcaacttaaaaaaattgaattagaaaAGGAAAACCGCAAAATTTTACGAATGAAAAATAAGGAGTTAAAAAATGCAGAAAAACTGAATAAATCGAAACGCCCACGCAAAGAAAATGCAAAGTCTAAGAAGTTTTCAAGTACGACAACTTCTACAAATGTGTTAGTTGCAATTGAAAATACAGGGCAGAGTAGTATTGAAGGAAATAGAGACATGCGAATCTACGAACAGTTAAATTGTCATAGCAATAATAAAAGTTGTCTAGTTGAGACTCCCGATTTTAATGAACCTATTGTAGAACCAATTATCAAACTCAATGAAATGGATGAATCTTCCGGAAGATATCAATCTACTACAAATACGACGACGTCAAGCAGCGTGGAGCCAATCAAAGACACTCTGCAAAAGTTTGAGCAGATACAGAAACTACAAAGCATCAAAAACGATCAAAATGAACTTCTAGGTAAAACGATACCTCATGAAACCATTGTCAAACCGTTcctaaaaaacaaagaaatacgTAAAGAAGATAAAACGGGCTTCAAACATATACTTTCTACATCGCACAGAGCGTCGATTATTAGTGAGCCACCGAAAGATCATCATGTTCGTAAACTTTTTTGTACTGATGTGGTACTGGACATTGGAGATAATTCACCTGCAGCTGGAAAGATGTGCTATCATTGA
- Protein Sequence
- MPRKRDTFEEDQVQKALGEIRNGQISKKEAAKKYNVPRSTLQFRLGSNFSKARPGPPTILTEEEEQRIVEWIKISQQKRFPKRNEDVVTAVKEFLEDTDRPHPFGENKIPGKGWFKAFLKRHPSLSIRASDPVSAASATVAASDIYSWFDTIENFLKDHDYYDILEDPTRIFNGDETNFLLCPKTKNVLAAKGSRNVYEIDKGSAKANLTVMFTFSAAGVLTPPMIIYPYKRIPEEIRKSLPKGWGIGISDNGWMTKQVFYEYISKVLHSYLVQLGTKIPVVYFVDGHSTHLTLPVSELCVKLQIILVALYANATRILQPADVAAFKPLKTSWNRKVLEWQRNNLSASLTKEKFAPLLYDVVESTVCKETIQKGFKACGLFPFNKFAINLSKCLGRSSSKSTYGSRLNPKSPDDGFQTLCEAIGDNKIQLFENIDRGELQKDSFNEYFVILYDLYNKFKFKGKLNLSVSDKSTQTHVEYQNIETSEIDISAIDEFFIIQDSPSTANYEIINISNVIPIQQSTELQTVTYITVPPQSTTAIIDDFLPWPETPLRKGCKTDTIKKPYVVTSPLWIKQAQLKKDQLKKIELEKENRKILRMKNKELKNAEKLNKSKRPRKENAKSKKFSSTTTSTNVLVAIENTGQSSIEGNRDMRIYEQLNCHSNNKSCLVETPDFNEPIVEPIIKLNEMDESSGRYQSTTNTTTSSSVEPIKDTLQKFEQIQKLQSIKNDQNELLGKTIPHETIVKPFLKNKEIRKEDKTGFKHILSTSHRASIISEPPKDHHVRKLFCTDVVLDIGDNSPAAGKMCYH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01054238;
- 90% Identity
- iTF_01054236;
- 80% Identity
- -