Nfla036539.1
Basic Information
- Insect
- Nephrotoma flavescens
- Gene Symbol
- nfxl1
- Assembly
- GCA_932525705.1
- Location
- CAKOBH010001511.1:276192-278899[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.3 2.7e+04 -3.0 1.4 14 19 181 186 181 186 0.86 2 19 0.78 1.6e+04 -2.2 0.7 4 10 217 223 217 223 0.92 3 19 1.1e-07 0.0022 19.7 17.3 1 19 231 248 231 248 0.99 4 19 3 6.2e+04 -4.7 2.5 5 10 273 278 273 278 0.93 5 19 3.9e-06 0.082 14.7 9.9 1 19 284 303 284 303 0.96 6 19 0.96 2e+04 -2.5 1.8 5 10 327 332 327 332 0.94 7 19 7.1e-07 0.015 17.1 13.0 1 19 338 356 338 356 0.99 8 19 4.4e-08 0.00091 20.9 12.5 1 19 391 409 391 409 0.98 9 19 1.4 2.9e+04 -3.1 0.4 1 5 418 422 418 427 0.72 10 19 1.2 2.4e+04 -2.8 1.8 5 10 432 437 432 437 0.95 11 19 0.037 7.6e+02 2.0 16.3 3 18 445 460 443 461 0.91 12 19 4e-08 0.00083 21.1 14.1 1 18 470 487 464 488 0.93 13 19 2.1 4.3e+04 -3.6 9.7 9 18 534 543 525 544 0.90 14 19 0.094 1.9e+03 0.7 6.8 3 12 557 566 556 566 0.90 15 19 0.41 8.5e+03 -1.3 1.1 6 10 627 631 626 631 0.90 16 19 3.7e-06 0.077 14.8 7.3 1 12 637 648 637 648 0.97 17 19 0.56 1.2e+04 -1.8 1.8 15 18 661 664 660 665 0.86 18 19 0.0032 65 5.4 15.5 3 18 677 692 676 693 0.94 19 19 0.0001 2.2 10.1 13.0 1 16 747 761 747 767 0.87
Sequence Information
- Coding Sequence
- ATGAACAAACGCGATAAATCCAATAAAGTGCAAAGCTCCAATCCATGGGGTAATGTGCAGCCAGCGCAAGCACGACCGAAACCGGCAAAAAATCAAACTCCGGATGTAAAAACCAATTCAGTGAAAAATCAAGAAAAGTTTAAACAAGTGCAAGCTAAGCACTTGGAAGCAGCCAGCAAAATCATTAAAGAATATGAATCGAGTTCAGATGAAGAAGAAATAACGTCAGGGGACGATATCCTTAAAACTGTGTTTCAAAGTTATGGTGGTAATTCGGCTGATTTGTCAAAGACACAACAGTTTCTGGAGAATTTATTTCAGTCCGGATCGGCAACATGTTTAATTTGTATTGGAGGTGTTAAACGAGTTGACGCGATTTGGTCATGTGAAAAATGTTACACATTTTTTCATCTCCAGTGTATTCAGCGCTGGTCTAACGATAGTGTATCCCAGAAACAGATGAACATCTCCAGCTCGGACCAAGGATACTACAATAATATGGGGATTTATGTGCCTAAGAAAACTAAACCTATTGTATGGGATTGTCCCAAATGTCGTACTACCTATAATCCAGATCAAGTTCCGCGGCATTATATGTGTTTTTGTGGAAAGGAAGTTAGTCCTGTGAACCATTTATGGAATATTCCACATTCATGTGGGGAATCGTGTGGTAAATCGCTAAAACCAGAATGTGGTCACAAGTGCGTGTTGCTATGCCATCCAGGTCCATGTCCACCGTGTCCTCAAATTATTTCCATTTCATGTAAATGTGGGAGTTCAGCACTCCGAACGGTCCGGTGCACACAAAAATCTTGGACATGTACAAAGAAATGTAACGAGAAACTGGGATGTGGAATTCACGTATGCGAATTACTCTGCCACGATAAAAACGAATGTCCCCCGTGCAAAAAGAAAAGTAAACAGCGGTGTGAATGTGGATCGAGTGTCGAAGAACGTAATTGCTCCCAATCAGGATGGAAATGTAAAAAAGTATGCAACAAAATGTTTCAGTGTGGCCTTCATAAATGTGAAAAGGTTTGTCATAATAATAATTGTGGTAATTGTCCATACGGGGAGCCGAGATCATGTCCCTGTGGCAAACAACTATCGGTTGCACCGTGCTCCGAACAGGTGGAATCGTGTGGCGATACGTGCCAGAAGATTTTGCCGTGTGGAGAGCATAGGTGTGCTCTGCGGTGCCACAAAGGCGAGTGTAGTCCCTGTTCAACGATAGTCGAGAAAAAATGCCGTTGTGGCGCGCATTCTAAAGAGTTGCCGTGCTCGAAAACATTCACATGCGAATCGAAATGCAAGCAAATTAGAGAATGCAAGAAACATCCATGCAACCGAAAATGTTGCGATAATCAATGCCCGCCTTGCGATAAAGTCTGTGGTAAAACACTGTCATGCACTAAACATAAATGCCAGTCATTGTGCCACAACGGCCCGTGTTATCCATGTAACCAGAAGTCTATTATTAAGTGCCGATGTGGAGGCACTACCAAAGAAGTTCCGTGCGGCCGAGAACGTAAGTCAGCGTCACCAAAATGTATGATGCCTTGCAAGATTGCATCGAAATGTCATCATGAAAATCCGCATCGGTGCCATCAAAATGATTGTCCGACTTGCATTCAAATTTGTAGTTTGTTCAACGACACTACAAAATGCAAGCATCCGTGCGAAAGTCGATGTCACGATGCTGTAAAAGTGTTGATCACAGATAAAAATTTCAAACCTGCACTGCCATGGGAGGTGCAAACCGAAACGTATGAAGTTCGAAAATTGCCACATCCCCCTTGTCAAATCAAGGTAGCTGCAGTATGTTTGGGCGGGCATGAAAAATGTATATGGCCATGCTATAATTCTGCACCGACAAGTTGTCAACGAGTTTGTGGTCGAAAATTAAAATGTGGTAATCATGAATGTCAACGGTTGTGTCATGAAGTTAACAATTTGGAGTCAATGGAGCAAGAGGAATCTTGTCAACCGTGCGCTGAAGGATGTAAAGTTGCCCGTTCCGATGGTTGTATTCATCCATGTAAACGGGCGTGTCATCCTCCTCCATGCGATCCATGTAACACCAATATTAAAACCCAATGCCACTGTGGATTATCGCCGGTGTTCTACAAGTGCGGTCAATTTTTCCGTCCAACCAAAAATGAGGAGGATCGAGCCCAGTTGGCCGAAGAGAAAGAGAGAATTTTGAGTTGTGGAAATCGCTGTAATCGGAATTATCCGTGTGGCCATCAATGTCGTGCAACTTGTCATTCGGGGAAATGTGAAAATCCCGAACAATGTAAGAAAAAAATCAAGCTCTATTGTCAATGCAAGAATTTGCGACAGGAAGTAACTTGCGATAAAATACGCCTTGAAAATTTCCAAATGATATGTAATGAAACCTGCACCGCCAAAAAACAAGAAACAAAAGAGGCGGCCAAAAGGAAAGAGGCCGAACTCAAAAAACAGGAAGAGGAACGAAACCGAATTGAATTAGAGGAGTTTGAGAAAAAGTACGCAAAGAAAAAACCACGTGAACGGAAGATGGCAGTAGTCGAGGAAGAAAAGGATTCAAATTTTACTAAAATTGGCCTAATCGCAGCTGGAGGCTTAGTTTTAGTTTCGTTTGTCGTTTATCTTTTAACTAAATAA
- Protein Sequence
- MNKRDKSNKVQSSNPWGNVQPAQARPKPAKNQTPDVKTNSVKNQEKFKQVQAKHLEAASKIIKEYESSSDEEEITSGDDILKTVFQSYGGNSADLSKTQQFLENLFQSGSATCLICIGGVKRVDAIWSCEKCYTFFHLQCIQRWSNDSVSQKQMNISSSDQGYYNNMGIYVPKKTKPIVWDCPKCRTTYNPDQVPRHYMCFCGKEVSPVNHLWNIPHSCGESCGKSLKPECGHKCVLLCHPGPCPPCPQIISISCKCGSSALRTVRCTQKSWTCTKKCNEKLGCGIHVCELLCHDKNECPPCKKKSKQRCECGSSVEERNCSQSGWKCKKVCNKMFQCGLHKCEKVCHNNNCGNCPYGEPRSCPCGKQLSVAPCSEQVESCGDTCQKILPCGEHRCALRCHKGECSPCSTIVEKKCRCGAHSKELPCSKTFTCESKCKQIRECKKHPCNRKCCDNQCPPCDKVCGKTLSCTKHKCQSLCHNGPCYPCNQKSIIKCRCGGTTKEVPCGRERKSASPKCMMPCKIASKCHHENPHRCHQNDCPTCIQICSLFNDTTKCKHPCESRCHDAVKVLITDKNFKPALPWEVQTETYEVRKLPHPPCQIKVAAVCLGGHEKCIWPCYNSAPTSCQRVCGRKLKCGNHECQRLCHEVNNLESMEQEESCQPCAEGCKVARSDGCIHPCKRACHPPPCDPCNTNIKTQCHCGLSPVFYKCGQFFRPTKNEEDRAQLAEEKERILSCGNRCNRNYPCGHQCRATCHSGKCENPEQCKKKIKLYCQCKNLRQEVTCDKIRLENFQMICNETCTAKKQETKEAAKRKEAELKKQEEERNRIELEEFEKKYAKKKPRERKMAVVEEEKDSNFTKIGLIAAGGLVLVSFVVYLLTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01455351;
- 90% Identity
- iTF_01052867; iTF_01054912;
- 80% Identity
- -