Ntri007009.1
Basic Information
- Insect
- Neocloeon triangulifer
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_031216515.1
- Location
- JASKYO010000011.1:4778041-4787337[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-99 3.2e-95 318.7 37.5 1 300 30 347 30 347 0.86 2 2 0.0024 39 3.2 6.0 121 173 346 398 345 405 0.93
Sequence Information
- Coding Sequence
- ATGGACAGTTCAAGTGTCGGCGGTCGGCGCCGGGTGGCGGCCACGCACACCGTCGAAGACCAGGCCCTCGATCAAATCGCAAAAGAGGCCGAAGCCAGGCTAGCTGCGAGACGGCAAGCGCGGGCTGAGGCGCGGGAAATCCGAATGCGAGAGCTGGAGCGCCAGCAGAAGGAGTCGGAGCAGTCCTCTGAGAGCCCTATGTACCCCCTTTCACCTGCTGAAGTCAAGCAGCAAAAGTTAGaCTCATCTGCTGTCCGAGCGCGGGTCGCCGTCAGCAGCCAAAGGTCGCTCTTGTCAACGCAGCCGTCCAACTACCAGTCGAGCAGACGCTCCTCCGAAGACTCAATGGAGGACGGGCTCAGTTTACGGGACATGAGGCAAGAGATGAAGGATTTGGACGAAAAGTTTAAGAAGGCGATGTTTCACAATGCTCAGCTGGACAACGAAAAAGCCTCGTTTTCTTACCAGGTCGAGTTGCTTAAAGACCAAATTGAACAGCTCGAAGAGGCGCATTTTCTTTTACAAAAAGAGCACAGGGACAAGTGCAAGGAGTATGGCCAACTAAAGCGCGACTCGGACAAGGTGGTAGAAGAGCGGGATGTTTACAAAGCGCAGTTGGAGGAGCGGGACAGGTTGATCCAAGAGGCCGGTCTAGTCATTGTGGGTGAGGACTACGTGTCAAGTGAGGAGGAGGACAGCGACGAGGAGGACGAGGACAGCGAAAAGAGCGCAACGCCGCCCAAGCAGCGGAAGGCGCTTGTCTCGGCAGACAACGCGCAGCTGCTTGACGCAGCAGGTCAGGGTTCGCTGGACGTCCGGCTCAGACGATTCAAGGAGGAGCGCGACGAGCTGCAGGACCAGGTGCGACACCTTAAACTCGAGCTTGAGGAGGAGAGGAACCGAAACCTGAAGGGATCAGTTGGCTCAACGTACAGTGTGAATGGCCCTAATGACGACGAGATGGACTTGCAAAgagAAGCGTCGAAACAGCTAGGCgactacaaattcaaattgcagaAGGCTGAGCAGGACATCTCGACGTTGCAAGCCAATGTCGCGCGTCTTGAAAGCCAAGTGCTGCGTTACAAGACTGCCGCCGAGACGTCCGAGAAGGCCGAAGAGGAGCTCAAGACAGAGAAGCGCAAGTTGCAGCGCGAGCTGCGGGAGGCGCAAGTACGGGTAGAGGAGCTGGACACTCAGAATACGCATCTGGTGCGGAGACTAGACAAGCTCAAGAATGCAAAATCAACCCTGTTGAAGGAACTCTGA
- Protein Sequence
- MDSSSVGGRRRVAATHTVEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKESEQSSESPMYPLSPAEVKQQKLDSSAVRARVAVSSQRSLLSTQPSNYQSSRRSSEDSMEDGLSLRDMRQEMKDLDEKFKKAMFHNAQLDNEKASFSYQVELLKDQIEQLEEAHFLLQKEHRDKCKEYGQLKRDSDKVVEERDVYKAQLEERDRLIQEAGLVIVGEDYVSSEEEDSDEEDEDSEKSATPPKQRKALVSADNAQLLDAAGQGSLDVRLRRFKEERDELQDQVRHLKLELEEERNRNLKGSVGSTYSVNGPNDDEMDLQREASKQLGDYKFKLQKAEQDISTLQANVARLESQVLRYKTAAETSEKAEEELKTEKRKLQRELREAQVRVEELDTQNTHLVRRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00344225;
- 90% Identity
- -
- 80% Identity
- -