Basic Information

Insect: Neoceratitis asiatica
Gene Symbol: -
Assembly: GCA_030068015.2
Location: CM061524.1:48285562-48302782[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.2e-05 0.0036 17.9 1.7 1 23 567 589 567 589 0.97

2 18 1.6e-05 0.0011 19.5 0.4 1 23 595 617 595 617 0.97

3 18 0.0013 0.092 13.5 0.5 1 23 623 645 623 645 0.95

4 18 2.6e-05 0.0018 18.9 3.1 1 23 651 673 651 673 0.97

5 18 5.9e-05 0.0041 17.7 4.7 1 23 679 701 679 701 0.99

6 18 0.00011 0.0074 16.9 5.7 1 23 707 729 707 729 0.97

7 18 5.3e-07 3.6e-05 24.2 4.3 1 23 735 757 735 757 0.98

8 18 1.9e-07 1.3e-05 25.6 2.4 1 23 763 785 763 785 0.97

9 18 0.00011 0.0076 16.9 6.7 1 23 791 813 791 813 0.97

10 18 3.2e-05 0.0022 18.6 6.5 1 23 819 841 819 841 0.98

11 18 5.3e-06 0.00037 21.0 4.5 1 23 847 869 847 869 0.98

12 18 2e-05 0.0014 19.2 7.1 1 23 875 897 875 897 0.98

13 18 1e-05 0.00069 20.2 7.6 1 23 903 925 903 925 0.97

14 18 1.1e-06 7.8e-05 23.2 7.7 1 23 931 953 931 953 0.98

15 18 0.00035 0.024 15.3 9.5 1 23 959 982 959 982 0.95

16 18 0.0003 0.02 15.5 0.5 1 23 988 1010 988 1010 0.97

17 18 0.00043 0.03 15.0 4.5 1 23 1020 1042 1020 1042 0.98

18 18 1.6e-05 0.0011 19.6 1.6 1 23 1048 1071 1048 1071 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.2e-05	0.0036	17.9	1.7	1	23	567	589	567	589	0.97
2	18	1.6e-05	0.0011	19.5	0.4	1	23	595	617	595	617	0.97
3	18	0.0013	0.092	13.5	0.5	1	23	623	645	623	645	0.95
4	18	2.6e-05	0.0018	18.9	3.1	1	23	651	673	651	673	0.97
5	18	5.9e-05	0.0041	17.7	4.7	1	23	679	701	679	701	0.99
6	18	0.00011	0.0074	16.9	5.7	1	23	707	729	707	729	0.97
7	18	5.3e-07	3.6e-05	24.2	4.3	1	23	735	757	735	757	0.98
8	18	1.9e-07	1.3e-05	25.6	2.4	1	23	763	785	763	785	0.97
9	18	0.00011	0.0076	16.9	6.7	1	23	791	813	791	813	0.97
10	18	3.2e-05	0.0022	18.6	6.5	1	23	819	841	819	841	0.98
11	18	5.3e-06	0.00037	21.0	4.5	1	23	847	869	847	869	0.98
12	18	2e-05	0.0014	19.2	7.1	1	23	875	897	875	897	0.98
13	18	1e-05	0.00069	20.2	7.6	1	23	903	925	903	925	0.97
14	18	1.1e-06	7.8e-05	23.2	7.7	1	23	931	953	931	953	0.98
15	18	0.00035	0.024	15.3	9.5	1	23	959	982	959	982	0.95
16	18	0.0003	0.02	15.5	0.5	1	23	988	1010	988	1010	0.97
17	18	0.00043	0.03	15.0	4.5	1	23	1020	1042	1020	1042	0.98
18	18	1.6e-05	0.0011	19.6	1.6	1	23	1048	1071	1048	1071	0.96

Sequence Information

Coding Sequence: ATGAATAGTGAACATGCAACGGTAAAAGCAACTGCTGGTGAGTCAGCGAAAGCCACAATTACAGTAGCAACAGCTAATGAATTGAATCGACAATATcagcaacatcagcagcagcagcaacaacaacagcaacagcaacaaaattcaCCACAACAGCATATTAATGAATCGGCGCATTTGCAGCAGCAATTGCAATTACAACAACCGCAAAACCAACATCTAAACgagCCACAACAAATACGAAGACAAGAAACATCtctgcagcaacagcagcagcaacgtcAACAGCAATTGCATCAATCACAGCAGGGTGATTCAATGTCGGTGAACAGCGGAGGAggaagtggtggtggtggagcaAACGGCGTCAATGTCGCTATAACAGCTCCTACCGCTGGCGCTATTGACAGCAGCTCAAGTATTGCTGGTAATGCCGGTGCCACCGCTAACAACACTTTAATACCACCCCTTGCAGTACCCGGCCAACATCAGACAGTTTCTATAGCAACAATTGACGCTGCAACAGCCGGGGGTGCAACTGTTTCTACGCCTGTAAGTGTTGGTGGTCTAACCATAAGTGTCGCTAATCCTCCAGCAACAATCGTCACTGGCAATGTATCCGATCAAAAgataatgcaacaacaattacaacagcaacaaaccaTAGGCTCTACTAGTGGTGTCACAGTGGCAACGGCAGCACCAACCACAACCACCACACTTATACCAAATGCACCAAACTTGAGCAAGTATTGGGTGGTGTCAAATGGCCAAGCGCTTCCTTATAACTTATTACCTAATGGCACCATAATCACACCACATCAGCGCCAGCCAACAACAACGGAACAGCAACATACACATGCGCAACAGCAGGTgtcgcagcagcaacaacaggcGAATTCATTGCAAATACACGCTACACTAAATACAAGTGATGAcaatcgacaacaacaacaacagcaacaacaagtttCGCAACAGCAACATGTAGCCGCTGCCGTGCAACAGTCacagcaaccacaacaacaacaacagcaacagcaacagcaacaacaattaataCAACGGGAGCATATTAAGGAGGAGAAGCCTTTTATAGATAACGGAAAGCTAAATCAATCAATTCTTATGCAACACGTTAGTGCAACGACGTCGTCTGCGCCGTCGACGTCTGGTGCCACCACCATTACACTGGGGGCACCAAAAACCGAAATAAAAGACGATGTTGGGATGGGTAAACCGCCACCAGGCATTGAAATGTATAAAGTTAACATAGAGGACTTTTCACAGCTCTTCACCTATCACGaagtttttggtaaaattcatgGTGATGTTATGAATCAGGCTGCACAGTCAGTTCCAAATGCAGTACCGCCACAACCACACGGTAGTAATGCGAGTAAcaatgctgctgttgctgccgtTGTGGCTAGTGCTAATGCAGCTGCGGCAGCTGCGGCGGCGGCAGCGGCAGCCGCCAATACTACAAGCGGTGTGGTGGCGCCCACCACTACTACCAATTTAACAACAGCCATTTCCACTAGCGGCACAACGACTGCACCAGCCACTGCTGTAACAGCAACACCAACTGTGACTGGTGAATTGTTAATGCCGAAAATGGAGGGCGGACTACCAGTTGTGGATCAGGCAACAACAATTACACTCGCGCCGGATGGCACACCTATCGCCACCGGCACACATGTATGCGACATTTGTggcaaaattttccaatttcggTATCAGTTAATTGTACATCGACGCTATCATAGCGAACGAAAACCATTCAATTGTCAGGTATGCGGTCAAGGGTTTACTACCTCGCAGGATTTAACACGTCACGGCAAGATACATATCGGTGGACCGATGTTTACGTGCATTGTTTGCTTTAATGTTTTCGCAAACAATGCCAGCCTGGAGCGCCATATGAAACGACATTCAACCGATAAGCCTTTCGCTTGCACAATCTGTCAGAAGACATTTGCACGCAAAGAACATTTGGACAACCATTTTCGTTCACACACGGGCGAGACGCCGTTTCGATGCCAATATTGCGCCAAGACATTTACACGCAAGGAGCACATGGTCAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTCACGCGCAAGGAACACTATGTCAACCACTACATGTGGCACACTGGCCAAACACCCCACCAGTGTGATGTATGCGGTAAGAAGTATACACGCAAGGAACATCTGGCCAATCATATGCGTTCACACACTAATGACACTCCATTTAGATGCGAGATATGCGGCAAGAGCTTCAGTCGTAAGGAGCATTTCACCAATCACATTCTATGGCATACAGGCGAAACTCCCCATCGTTGTGATTTTTGCTCGAAAACATTTACACGCAAGGAACATTTGTTAAATCATGTACGTCAACATACTGGTGAATCGCCACATCGTTGCACTTATTGTTTGAAAACGTTCACACGTAAAGAACACCTAGTAAATCACATACGTCAACATACGGGTGAAACACCCTTTAAATGCACCTATTGTACGAAGGCATTTACACGCAAAGATCATATGGTGAATCATATAAGGCAGCATACTGGTGAATCGCCACACAAGTGCACCTACTGCACCAAAACGTTCACACGTAAGGAGCATCTTGTTAATCATGTACGTCAGCATACAGGCGAATCTCCACATCGTTGCAGTTATTGCAAGAAGACTTTTACACGCAAAGAGCATTTGACGAATCATGTGCGCTTGCATACCGGTGATTCGCCGCACAAATGTGAATATTGTCAGAAGACATTTACGCGTAAGGAACATCTAAATAATCATATGCGTCAGCATTCAAGCGACAATCCTCATTGTTGCAATGTCTGCAACAAGCCATTTACCCGTAAAGAGCATCTTATTAATCATATGTCGCGTTGTCACACTGGTGATCGTCCATTTGCCTGTGAAACTTGTGGTAAATCATTTCCACTCAAAGGCAATTTGCTATTCCATCAACGCAGTCATACTAAAGGACAAGAATGTGAACGTCCGTTTTCATGTGAGAAGTGCCCCAAGACATTTATATGCAAagGCCATCTCGTTTCTCATATGCGTTCGCATTCGGGTGAGAAACCACACGCTTGTACACTGTGCAGCAAAGCTTTTGTAGAGCGTGGTAATTTGAAGCGACACATGAAGATGAATCACCCTGATGCAGTAATGCCTCCACCACCACAACCACACCCACAAATTCCAGCTGGGGTATTGGCTTCGGTGAAAGAGGAGATCAAACCGATATTTCTTCCACATCAAACACCAACAATGCACACCATTCAGCAAATTACGTCGGGCGCTGCTGCAGCAAATGCCGTACAGTTGGCGCCTAGTCTAGTGCCGCTGGTATCTTCAACTATAACATCGCACAATAGccagaaaacacaacaacagcaacagcagcagcagcaacagcaacaacagcaacaacaacaacagcagcaagcacatcagcaacaccaacaacaagtgcaacagcagcagcaacaacaacaagcacaccaacaacaacagttacTTCAATTATCcatacaacatcaacaacaacaacaacaacaacaacaggagcaACATCgtcaacaccaacagcaacaacagcaggcAGCACAAGCACATCATCAACAAACCCAGGCGCAGGCGCAACAACAAGCCCATGCACCGCAACCTCAACCGCCAACAGTGCCAATCGCACTAATACAAACTGATCCGAACGTTTTAGCGCGTGCCGCAATGCAATTGCAGCACTTGCCAGCAAATGTTGAGCAACATCCAGTGGTTTACTAA
Protein Sequence: MNSEHATVKATAGESAKATITVATANELNRQYQQHQQQQQQQQQQQQNSPQQHINESAHLQQQLQLQQPQNQHLNEPQQIRRQETSLQQQQQQRQQQLHQSQQGDSMSVNSGGGSGGGGANGVNVAITAPTAGAIDSSSSIAGNAGATANNTLIPPLAVPGQHQTVSIATIDAATAGGATVSTPVSVGGLTISVANPPATIVTGNVSDQKIMQQQLQQQQTIGSTSGVTVATAAPTTTTTLIPNAPNLSKYWVVSNGQALPYNLLPNGTIITPHQRQPTTTEQQHTHAQQQVSQQQQQANSLQIHATLNTSDDNRQQQQQQQQVSQQQHVAAAVQQSQQPQQQQQQQQQQQQLIQREHIKEEKPFIDNGKLNQSILMQHVSATTSSAPSTSGATTITLGAPKTEIKDDVGMGKPPPGIEMYKVNIEDFSQLFTYHEVFGKIHGDVMNQAAQSVPNAVPPQPHGSNASNNAAVAAVVASANAAAAAAAAAAAAANTTSGVVAPTTTTNLTTAISTSGTTTAPATAVTATPTVTGELLMPKMEGGLPVVDQATTITLAPDGTPIATGTHVCDICGKIFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLVNHVRQHTGESPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKTFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAVMPPPPQPHPQIPAGVLASVKEEIKPIFLPHQTPTMHTIQQITSGAAAANAVQLAPSLVPLVSSTITSHNSQKTQQQQQQQQQQQQQQQQQQQQAHQQHQQQVQQQQQQQQAHQQQQLLQLSIQHQQQQQQQQQEQHRQHQQQQQQAAQAHHQQTQAQAQQQAHAPQPQPPTVPIALIQTDPNVLARAAMQLQHLPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01358224;
90% Identity: iTF_00303939;
80% Identity: -