Basic Information

Insect: Ceratitis capitata
Gene Symbol: -
Assembly: GCA_000347755.4
Location: NW:340071-363077[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.8e-05 0.0019 18.0 1.7 1 23 504 526 504 526 0.97

2 18 1.2e-05 0.00059 19.6 0.4 1 23 532 554 532 554 0.97

3 18 0.00098 0.05 13.6 0.5 1 23 560 582 560 582 0.95

4 18 1.9e-05 0.00096 19.0 3.1 1 23 588 610 588 610 0.97

5 18 4.3e-05 0.0022 17.8 4.7 1 23 616 638 616 638 0.99

6 18 7.9e-05 0.004 17.0 5.7 1 23 644 666 644 666 0.97

7 18 3.9e-07 2e-05 24.3 4.3 1 23 672 694 672 694 0.98

8 18 1.4e-07 7e-06 25.7 2.4 1 23 700 722 700 722 0.97

9 18 8.1e-05 0.0041 17.0 6.7 1 23 728 750 728 750 0.97

10 18 2.3e-05 0.0012 18.7 6.5 1 23 756 778 756 778 0.98

11 18 3.9e-06 0.0002 21.1 4.5 1 23 784 806 784 806 0.98

12 18 1.5e-05 0.00074 19.3 7.1 1 23 812 834 812 834 0.98

13 18 7.4e-06 0.00038 20.2 7.6 1 23 840 862 840 862 0.97

14 18 8.3e-07 4.2e-05 23.2 7.7 1 23 868 890 868 890 0.98

15 18 0.00026 0.013 15.4 9.5 1 23 896 919 896 919 0.95

16 18 0.00022 0.011 15.6 0.5 1 23 925 947 925 947 0.97

17 18 0.00032 0.016 15.1 4.5 1 23 957 979 957 979 0.98

18 18 1.1e-05 0.00058 19.6 1.6 1 23 985 1008 985 1008 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.8e-05	0.0019	18.0	1.7	1	23	504	526	504	526	0.97
2	18	1.2e-05	0.00059	19.6	0.4	1	23	532	554	532	554	0.97
3	18	0.00098	0.05	13.6	0.5	1	23	560	582	560	582	0.95
4	18	1.9e-05	0.00096	19.0	3.1	1	23	588	610	588	610	0.97
5	18	4.3e-05	0.0022	17.8	4.7	1	23	616	638	616	638	0.99
6	18	7.9e-05	0.004	17.0	5.7	1	23	644	666	644	666	0.97
7	18	3.9e-07	2e-05	24.3	4.3	1	23	672	694	672	694	0.98
8	18	1.4e-07	7e-06	25.7	2.4	1	23	700	722	700	722	0.97
9	18	8.1e-05	0.0041	17.0	6.7	1	23	728	750	728	750	0.97
10	18	2.3e-05	0.0012	18.7	6.5	1	23	756	778	756	778	0.98
11	18	3.9e-06	0.0002	21.1	4.5	1	23	784	806	784	806	0.98
12	18	1.5e-05	0.00074	19.3	7.1	1	23	812	834	812	834	0.98
13	18	7.4e-06	0.00038	20.2	7.6	1	23	840	862	840	862	0.97
14	18	8.3e-07	4.2e-05	23.2	7.7	1	23	868	890	868	890	0.98
15	18	0.00026	0.013	15.4	9.5	1	23	896	919	896	919	0.95
16	18	0.00022	0.011	15.6	0.5	1	23	925	947	925	947	0.97
17	18	0.00032	0.016	15.1	4.5	1	23	957	979	957	979	0.98
18	18	1.1e-05	0.00058	19.6	1.6	1	23	985	1008	985	1008	0.96

Sequence Information

Coding Sequence: ATGTTGCAGCTCCAAAAAATACGCAGACAAGAAACatctcagcagcagcagcaacatcaattGCATCACTCCCAGCAGACAAATTCAATGTCGGTGAGTAGTGGAGGAGATCGAGGAGGCGGAGGAGGTGCTGGGGCCAGCGGCGTCAATATCGCTGTAAGTTCCTCCGTAGTAACCGCTGGCGCTATTGGCAGCGCAAGTGTTGCCGGTAATGCCTGTAATGCTTCCGGCAACAATTTAATACCTCTTGCTGTCCCTGGTCAACATCAGCCGGTTTCTGTAGCAACAATTGCCGCTGCGACAGCCGGGGGTGCAATTATATCTACCGTGCCCACAACTACCCCTGTTAGTGTTGGGGGTCTAACCATAAGTGTCGCTAATGCTCCGGCAACAATCCTCAGTGGCAATGTTTCCGATCAAAAGATGTTGCAacagcaattacaacaacaacaatcaatggGTTCTACTGGTGTCACAGTGTCAACGGCAGCACCAACCACAACCGCACTTCTACCAAATGCACCAAACTTGAGCAAGTATTGGGTGGTTTCGAATGGTCAAGCGCTTCCCTATAACTTATTACCTAATGGCACCATAATCACACCACATCAGCGGCAGCCAACAACAACGGATCAGCAGCACACGCATACGCAACAGCAGGTgccacagcaacagcagcagcaacaacaacagcagcaacaacaacaacaacaacaacaacaacagcaaacaaattcATTGCAAATACACGCCACAATAAATACAAGCGATGACAAtcgacaacaacagcatcaagtTTCGCAACAGCAACATGTAGCCGCTGGCGTGCAACAGTCCCAGCAAccccaacagcagcaacagcaacaccaattAATACAACGGGAGCATATTAAGGAGGAGAAGCCATTTATAGATAACGGAAAGCTAAATCAATCAATTGTCATGCAACACGTTAGTGCAACACCGTCGTCTGCGCCGTCGACCTCTGGTGCCACCACAATCACGTTAGGTGCGccaaaaaccgaaataaaagaCGATGTTGGAATGGGCAAACCGCCGCCAGGCATTGAAATGTATAAAGTTAACATAGAAGACTTTTCACAGCTCTTTACCTATCAcgaagtttttggaaaaattcatgGTGATGTTATGAACCAGGCTGCACATTCAGTTCCAAATGCAGCACCGCCACCAACACACAGTAATGCGAGTAACAATGCTGCTGTTGCGGCTGTTGTGGCCAGTGCTAAtgcagctgctgcagcagcggcggcggcagctGCAGCCGCCAATACTACAAGTGGCGTAGTGGCGCCTACTACTACCCCAAATTTAACAACGGCCATCTCCACCAGTGGCACAACGACTGCACCAGCCACTTCTGTTACAGCAACACCAACCGTAACGGGTGAATTGTTGATGCCGAAAATGGAAGGAGGACTACCAGTTGTCGatcaagcaacaacaatcactCTAGCCCCGGATGGCACGCCTATTGCCACAGGCACACATGTGTGCGACATTTGCGGCAAAATCTTCCAATTTCGCTATCAGTTAATTGTACATCGACGCTATCATAGCGAACGAAAACCATTCAATTGTCAGGTATGCGGTCAAGGGTTTACTACCTCGCAGGACTTAACACGTCACGGCAAGATACATATCGGTGGACCGATGTTTACGTGCATTGTGTGTTTTAATGTTTTCGCAAACAATGCCAGCCTGGAGCGCCATATGAAACGACATTCAACCGATAAGCCTTTCGCTTGCACGATCTGTCAGAAGACATTTGCACGTAAAGAACATTTagacaaccattttcgttcgcACACGGGCGAAACGCCGTTCCGATGCCAATATTGCGCCAAGACATTCACACGCAAGGAGCACATGGTTAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTCACGCGCAAGGAACACTATGTCAACCACTACATGTGGCACACTGGCCAAACACCTCATCAGTGTGATGTTTGCGGCAAGAAGTATACACGCAAGGAACATCTAGCCAATCATATGCGTTCACACACTAATGACACTCCATTCAGATGTGAGATATGCGGCAAAAGCTTCAGTCGTAAGGAGCATTTCACCAATCACATTCTCTGGCATACCGGCGAAACACCCCATCGTTGCGATTTTTGCTCTAAGACATTTACACGCAAGGAACATTTGTTAAATCATGTACGTCAGCATACTGGCGAATCGCCCCATCGTTGCACTTATTGCTTGAAAACGTTTACGCGTAAGGAACACCTAGTAAATCACATACGTCAGCATACAGGTGAAACACCATTTAAGTGCACCTATTGTACGAAGGCATTTACGCGCAAAGATCATATGGTGAATCATATAAGACAACATACTGGCGAATCGCCACACAAGTGCACTTACTGCACCAAAACGTTTACACGTAAGGAGCATCTTGTCAATCATGTGCGTCAGCATACAGGCGAGTCTCCACATCGTTGCAGTTACTGCAAGAAGACTTTCACACGTAAAGAACATTTGACGAATCATGTGCGCTTGCATACTGGTGATTCACCGCACAAATGTGAATATTGTCAGAAGACATTTACGCGCAAGGAGCATCTTAACAATCATATGCGTCAGCATTCAAGCGACAATCCTCACTGTTGCAATGTCTGTAACAAGCCATTTACCCGTAAGGAGCATCTTATTAATCATATGTCACGTTGTCACACTGGCGATCGTCCTTTTGCCTGTGAAACTTGTGGTAAATCATTTCCACTCAAAGGTAATTTGCTGTTCCATCAGCGCAGTCATACTAAAGGACAAGAATGCGAACGTCCATTTTCATGTGAGAAGTGTCCTAagacatttatatgtaaagGCCATCTTGTCTCTCATATGCGTTCGCATTCGGGCGAGAAACCACACGCTTGTACATTGTGCAGCAAAGCTTTTGTAGAGCGTGGAAATTTGAAGCGACACATGAAGATGAACCATCCTGATGCGGTAATGCCTCCACCACCACAACCACACCCACAAATTCCAGCAGGCATATTAGCTTCAGTGAAAGAGGAAATCAAGCCGATATTTCTTCCCCATCAAACACCAACAATGCACACTATCCAGCAAATAACATCAGGGGCTGCTGCGGCGAATGCCGTACAGTTGGCGCCCAGTCTAGTGCCGCTGGTCACTTCAACAATAACATCGCACAATAATCAGaaaccacagcaacaacagcagcagcaacaacaacaacagcagcagcaagcacatcagcaacatcaacaacaagtccaacagcaacaacaacagcaacagcagcagcaacaacaagcacaccagcagcaacaacaattgctgcAATTATCtctacaacatcaacaacaacagcaggaaCAACATCGccaacaccagcagcaacaacaacaggtacAGGCACATCATCAACAAACCCAAGCGCAGGCGCAACAACAAGCACATGCACCTCAACCTCAACCGCCACCAGTGCCAATCGCACTAATCCAAACTGATCCGAGCGCTTTAGCACGCGCGGCAATGCAATTGCAACACCTGCCAGCCAATGTTGAGCAACATCCGGTGGTTTACTAA
Protein Sequence: MLQLQKIRRQETSQQQQQHQLHHSQQTNSMSVSSGGDRGGGGGAGASGVNIAVSSSVVTAGAIGSASVAGNACNASGNNLIPLAVPGQHQPVSVATIAAATAGGAIISTVPTTTPVSVGGLTISVANAPATILSGNVSDQKMLQQQLQQQQSMGSTGVTVSTAAPTTTALLPNAPNLSKYWVVSNGQALPYNLLPNGTIITPHQRQPTTTDQQHTHTQQQVPQQQQQQQQQQQQQQQQQQQQQTNSLQIHATINTSDDNRQQQHQVSQQQHVAAGVQQSQQPQQQQQQHQLIQREHIKEEKPFIDNGKLNQSIVMQHVSATPSSAPSTSGATTITLGAPKTEIKDDVGMGKPPPGIEMYKVNIEDFSQLFTYHEVFGKIHGDVMNQAAHSVPNAAPPPTHSNASNNAAVAAVVASANAAAAAAAAAAAAANTTSGVVAPTTTPNLTTAISTSGTTTAPATSVTATPTVTGELLMPKMEGGLPVVDQATTITLAPDGTPIATGTHVCDICGKIFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLVNHVRQHTGESPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKTFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAVMPPPPQPHPQIPAGILASVKEEIKPIFLPHQTPTMHTIQQITSGAAAANAVQLAPSLVPLVTSTITSHNNQKPQQQQQQQQQQQQQQAHQQHQQQVQQQQQQQQQQQQQAHQQQQQLLQLSLQHQQQQQEQHRQHQQQQQQVQAHHQQTQAQAQQQAHAPQPQPPPVPIALIQTDPSALARAAMQLQHLPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01358224;
90% Identity: iTF_01045626;
80% Identity: -