Nsal008610.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nebria salina
Gene Symbol
nfxl1
Assembly
GCA_944039265.1
Location
CALUEJ010000060.1:699217-702335[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 3.3e+04 -5.0 1.9 15 19 159 163 159 163 0.85
2 20 0.24 4.1e+03 -1.2 0.2 4 10 194 200 193 201 0.92
3 20 1.9e-07 0.0032 18.3 17.0 1 19 208 225 208 225 0.99
4 20 2 3.3e+04 -5.0 0.8 15 18 251 255 251 256 0.49
5 20 7e-05 1.2 10.1 15.4 3 19 263 279 261 279 0.91
6 20 2 3.3e+04 -4.2 1.4 6 10 304 308 303 308 0.88
7 20 2.7e-08 0.00044 21.1 14.5 1 19 314 332 314 332 0.99
8 20 5.9e-05 0.99 10.4 12.8 1 18 367 384 367 385 0.97
9 20 3.2e-05 0.53 11.2 15.0 1 18 419 436 419 437 0.94
10 20 9.1e-10 1.5e-05 25.7 13.1 1 19 446 464 446 464 0.97
11 20 0.93 1.6e+04 -3.0 0.6 5 10 492 497 492 497 0.92
12 20 0.0005 8.4 7.4 7.4 10 19 513 522 510 522 0.90
13 20 0.24 4.1e+03 -1.2 6.4 3 12 533 542 525 542 0.77
14 20 0.34 5.8e+03 -1.7 4.3 14 19 570 575 570 575 0.90
15 20 0.58 9.8e+03 -2.4 0.7 5 10 588 593 584 593 0.74
16 20 1.6 2.7e+04 -3.8 1.1 6 10 601 605 599 605 0.53
17 20 0.011 1.9e+02 3.1 6.3 1 12 611 622 611 622 0.89
18 20 0.67 1.1e+04 -2.6 2.1 6 10 639 643 638 643 0.87
19 20 1e-05 0.17 12.8 16.9 3 19 652 668 651 668 0.94
20 20 6.8e-06 0.11 13.4 9.5 1 16 711 725 711 731 0.92

Sequence Information

Coding Sequence
atgAATTCTTCGGGGCGTGAGAAACCTCCTAAAAATCCATGGAATAACTCCAAACctacatcaaaaataaaacctaACCCTTCTGAACGTAAATTCCGGGAGGCTCAAGTAAAACTGCAAGCTGCCGTGGATAAATTCGCAAAAGATTACGAATCATCATCATCGGAAGAGGATTTAGAATCGGATAATTTAATAGGgtcgattttaaaaaaatactcgCAAGTTGGAGGAAAAGCAGAAAATTTGGGGCGCACCCAAGCGTTTTTAGAAGATACGCTTTCGTCAGGGGCCGCAACTTGTTTAATATGTATCGGATCGATCAAACGCATAGAACAAATTTGGAGTTGTGTAACTTGCTATTGCTTTTTTCATTTGCGATGTATCGAGCGGTGGTCAAAAGACAGCGTCACTCAACAGAAGGAATCATTGCGGGAACAGCCGCAACACGAAAAACCAGTTGAAGTTAAATGGGGCTGTCCTAAATGTCGATTCGATTATTTACCGGAAGAGATTCCAagagtgtatgtatgtttttgcGGTAAAACTATCAATCCTAAGTTTGAGCCGTGGTTAGTGCCACATTCTTGCGGTGATACCTGCGGCAAACAATTAAAACCTGCCTGCGGACACAGCTGTGTTTTGTTGTGTCATCCGGGTCCATGTCCTCCTTGTCCAAAAACTATAACAGCTTCTTGTTATTGTCGGGGAAGGCCCGCCAAAATTCAACGTTGCTCCAACAAGGAATGGTCATGTGGGGCTCCGTGCCGCAAATTACTCGAGTGTAAAAAACACCCGTGCCCCAAATCATGTCATGCGGGCGTCTGCCCTCCATGCTCCAAAAAAAGCAAACAGAAATGTCTATGTGGGGGTCAAGAACAACAAAGGGATTGTGCTACTCCGTTTTGGCAATGCAAAAAGATTTGCGATCGTTCATTATCTTGCGGACATCATCGATGTTTGTTGGTGTGTCACGCTGGACCATGTGGTGTTTGTCCACTGTCCAAACCACGACAATGTCCATGTGGAAAAACGACCAGTGTACTCCCATGCACTAAAGAAACTCCTACATGTGGGGACACTTGTGGCAAGTTATTAGAATGTGGAGCGCACACGTGTCACTCGCGGTGCCACAAAGACAAGTGCAGCACGTGCTTGGAAATCGTTGAAAAATTGTGTCGTTGCAAACTACATGAAAAAGAAGTCCAGTGcaagaaacaatatttatgcGACACCAAGTGTAAACAAATGCGCGATTGCAATAAACATCTATGTAACAGAAAGtGCTGTGATGGAAACTGCCCTCCTTGCGAAAAGCCGTGTGGACGCACACTAACCTGCGGCCTCCACAAATGCCCTTCCGTCTGCCATCGAGGTCCTTGTTACCCGTGCACTTTAACCACCCTAGTAAAATGTCGCTGTGGCGCAACGTCTCTAACCGTACCTTGCGGCCGCAAGAAACGTACCCGCCCTCCGCGTTGCATTAAATTATGTCGCAACCCGCCAGATTGTCACCATAACGGCCGATTTCCTCATCGTTGTCATTTCGGCGACTGCCCTCCCTGTCGACAGATTTGTGGCCAGAAACTGGTGAAATGTAACCATTTGTGTCCAGACCAATGTCATTCGGCGGttttatgcaaaattaaaGTGGAAAAGGCGACTATGCCATGGGAACAAAGAGACGGTGGCATGGAAAAGAAATGTTTACCATGTCAACCTTGTAAAGTGCCCGTGTTGGTGACATGTTTGGGGAAACACGAGACTTGTGAATATCCATGCGCCGACGCAGAACCCCGATCATGCCACCGTCCATGTAATCGAATGCAAACATGTCAAAATCACACTTGTGAGCTAGATTGTCATACAGTTGAAAATTCACCAAATGAAAAACTgGTTGGAACAAATTGCGAACAATGCGAGCAACCCTGTACGGCCCCACGCCCAGAAGGCTGTCAACACGAATGTCGCATACCATGCCACAAAGGGCCTTGTCCCCCATGCACCCAAATGATTCGCCTAAAATGCCATTGCGGCCTAAATCAACCCTACGTGCGATGTTCAACTTGGACCAGTAGTGAAGACAAAAATGCGTTGCTGACTTGCGGGAATCAGTGTCCaagaaatTATGCCTGCGGACATCGTTGCAAGGCGAACTGCCACGCGGGACTCTGCCCCGATGCGGAACTTTGCAAAAAGAAGGTGAAGGTGTCGTGTGATTGCAAACGGATTCGAAAAGAGTTTCAATGCAGCGCGGTGAGGAACAATGAAGCACACGTGGTTTGTGACGAGATGTGCGCGCGAAAACTAGAAATGGAGAAGACATTGAAAGATGCCGAAGCGGCAGAGAAGAAACGGGAACAAGAGGCAAAGAATGCTAAAGAATTGGAGTTGTTCGAAAAGAAATTTGGAGggaagaaaaaatataaagacTGGAAGAAAGCGGATGTTGAAGATGAATCATTTTTGCTGAAGAATAGGATCTACATTCTTGCGTTTGCTGTAGTTTTAATgacaatttgtatttatacatttgtttaa
Protein Sequence
MNSSGREKPPKNPWNNSKPTSKIKPNPSERKFREAQVKLQAAVDKFAKDYESSSSEEDLESDNLIGSILKKYSQVGGKAENLGRTQAFLEDTLSSGAATCLICIGSIKRIEQIWSCVTCYCFFHLRCIERWSKDSVTQQKESLREQPQHEKPVEVKWGCPKCRFDYLPEEIPRVYVCFCGKTINPKFEPWLVPHSCGDTCGKQLKPACGHSCVLLCHPGPCPPCPKTITASCYCRGRPAKIQRCSNKEWSCGAPCRKLLECKKHPCPKSCHAGVCPPCSKKSKQKCLCGGQEQQRDCATPFWQCKKICDRSLSCGHHRCLLVCHAGPCGVCPLSKPRQCPCGKTTSVLPCTKETPTCGDTCGKLLECGAHTCHSRCHKDKCSTCLEIVEKLCRCKLHEKEVQCKKQYLCDTKCKQMRDCNKHLCNRKCCDGNCPPCEKPCGRTLTCGLHKCPSVCHRGPCYPCTLTTLVKCRCGATSLTVPCGRKKRTRPPRCIKLCRNPPDCHHNGRFPHRCHFGDCPPCRQICGQKLVKCNHLCPDQCHSAVLCKIKVEKATMPWEQRDGGMEKKCLPCQPCKVPVLVTCLGKHETCEYPCADAEPRSCHRPCNRMQTCQNHTCELDCHTVENSPNEKLVGTNCEQCEQPCTAPRPEGCQHECRIPCHKGPCPPCTQMIRLKCHCGLNQPYVRCSTWTSSEDKNALLTCGNQCPRNYACGHRCKANCHAGLCPDAELCKKKVKVSCDCKRIRKEFQCSAVRNNEAHVVCDEMCARKLEMEKTLKDAEAAEKKREQEAKNAKELELFEKKFGGKKKYKDWKKADVEDESFLLKNRIYILAFAVVLMTICIYTFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01040530; iTF_01039804;
90% Identity
iTF_01039804;
80% Identity
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