Ning010802.1
Basic Information
- Insect
- Nebria ingens
- Gene Symbol
- nfxl1
- Assembly
- GCA_018344505.1
- Location
- JADQWA010000290.1:3026-6223[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 2 1.8e+04 -5.0 1.9 15 19 159 163 159 163 0.85 2 23 0.24 2.2e+03 -1.2 0.2 4 10 194 200 193 201 0.92 3 23 4.4e-08 0.00039 20.4 15.8 1 19 208 225 208 225 0.99 4 23 0.046 4.1e+02 1.1 0.6 6 12 251 257 250 257 0.87 5 23 7e-05 0.63 10.1 15.4 3 19 263 279 261 279 0.91 6 23 0.91 8.1e+03 -3.0 1.6 6 10 304 308 303 308 0.89 7 23 1.7e-08 0.00015 21.7 12.5 1 19 314 332 314 332 0.99 8 23 2 1.8e+04 -4.7 2.4 5 10 345 350 341 350 0.62 9 23 2.1e-05 0.19 11.8 13.8 1 18 367 384 367 385 0.97 10 23 1 9.3e+03 -3.2 0.2 1 4 394 397 394 398 0.88 11 23 1.4e-05 0.12 12.4 16.6 1 18 419 436 419 437 0.94 12 23 9.1e-10 8.1e-06 25.7 13.1 1 19 446 464 446 464 0.97 13 23 0.84 7.5e+03 -2.9 0.8 5 10 492 497 492 497 0.90 14 23 0.0015 13 5.9 6.0 10 19 513 522 510 522 0.90 15 23 0.23 2e+03 -1.1 6.3 3 12 533 542 525 542 0.77 16 23 0.34 3.1e+03 -1.7 4.3 14 19 570 575 570 575 0.90 17 23 0.8 7.2e+03 -2.8 0.6 5 10 588 593 584 593 0.72 18 23 1.6 1.4e+04 -3.8 1.1 6 10 601 605 599 605 0.53 19 23 0.0008 7.1 6.7 7.9 1 12 611 622 611 622 0.96 20 23 2 1.8e+04 -7.0 4.4 6 10 639 643 636 643 0.67 21 23 2.3e-06 0.021 14.8 16.6 4 19 653 668 651 668 0.93 22 23 2.2e-06 0.02 14.9 13.4 1 16 711 725 711 731 0.92 23 23 0.91 8.1e+03 -3.0 0.5 6 10 761 765 760 765 0.90
Sequence Information
- Coding Sequence
- ATGAATACCTCGGGGCGTGATAAACCTCCTAAAAACCCGTGGAACAACCCCAAACCTACGTCAAAAATAAAACCTAACCCTACTGAACGTAAATTCCGGGAGGCTCAAATAAAATTGCAAGTTGCCGTAGATAAATTCGCAAAAGACTACGAATCATCTTCATCGGAAGACGACTTAGAATCGGATAATTTAATAGGGTCTATTCTAAAAAATTATTCCCAAGTTGGGGGACAAAAGGAAAATTTGGGACGCACTCAGGCGTTTTTGGAAGATACGCTTGCGTCAGGAGTCGCAACTTGTTTAATATGTATTGGGTCGATCAAACGCATAGAAAAAATTTGGAGTTGTGAGTCTTGTTATTGCTTCTTTCATTTGCAATGTATTGAAAGGTGGTCAAAAGATAGCGTTACCCAACAGAAGGAGTCTTTGCGAGAACAGCCGCAACACGAAAAACCAGTGGAAGTAAAATGGGGGTGCCCTAAATGTCGATTTGATTATTTACCGGAACAGATTCCAAGAGTTTATATATGTTTTTGTGGTAAAACTGTTAACCCACCGTTTGAACCATGGTTAGTGCCTCATTCCTGTGGTGATACTTGCGGTAAACAATTAAAACCGTACTGCGGACACGATTGTATTTTGTTGTGCCATCCAGGTCCATGCCCCCCTTGTCCAAAAACAGTAACAGTTTCTTGTTACTGTCAGGCAAAGCCCCCAAAAATCCAACGCTGTTCCAACAAGGAATGGTCATGTGGGGCTCCTTGTCACAAATTACTCGAGTGCAAAAAGCACCCGTGTCCTAAATCATGTCATGCAGGCGTCTGCCCTCCATGCTCCAAAAGAAGTAAGCAGAAATGCTTATGTGGAGCCCAAGAACAACAAAGAGATTGCGCTACTCCGGTTTGGCAATGCCAAAAGATTTGCGGTCGCTCGTTGTCTTGCGGACATCATCGATGTTTGTTGGTGTGTCACGCTGGACCTTGTGCTGTTTGTCCGCTGTCCAAACCGCGGCAATGTCCATGCGGAAAAACAATCTGCCAACTTCCATGCACTCAAGAAACGCCTACATGTGGGGACACTTGTGGAAAGTTATTAGAATGTGGAGCGCACACGTGTCACTCGCGGTGTCACAAAGATAAGTGTAGCCCGTGCTTGGAGATCGTAGTGAAATGGTGTCGTTGCGGACTACATGAAAAAGAAGTCCAATGCAAGAAACAATATTTATGCGACACTAAGTGCAAACAAATGCGCGATTGCAATAAACATCAATGTAATAGAAAGTGCTGTGACGGAAACTGCCCTCCTTGCGAAAAACCATGTGGGCGCACCTTAACCTGCGGCCTCCACAAATGTCCTTCTGTCTGCCACCGAGGTCCTTGTTACCCCTGTACTCTAACCACCCTGGTCAAATGTCGCTGTGGGGCAACCTCTCTAACCGTTCCTTGCGGCCGCAAGAAACGTACCCGTCCTCCACGTTGTCCTAAATTATGCCGCAACCCTCCAGATTGTCACCATACGGTCCGAACTCCCCATCGTTGCCATTTCGGTGAGTGCCCCTCCTGTCGGCAGATTTGCGGCCAGAAATTGGCGAAATGCAACCATTTATGCCCGGACCAATGTCATTCGGCGGTTTTATGCAAAATTAAAGTGGAAAAAGCGACGATGCCATGGGAACAAAGGGATGGCGGGGTGGAGAAGAAGTGTTTACCATGTCAGCCTTGTAAAGTGCCTGTGTTGGTCACATGTTTGGGGAAACACGAGACTTGCGAGTGGCCATGCGCCCAGGCAGAGCCCCGATCGTGCCACCGTCCATGCGGCCGAATACTAGCGTGCGGAAATCACACTTGTGGGCTAAATTGTCATACAGTTGAAAATTCACCAAACGAAGAACTGGCTGGAACAAATTGCGAACAATGCGAGCATCCCTGTTTGGCCTCGCGCCCAGAAGGCTGCCTACATGAATGCCCCAATCCATGTCACGCAGGGCCTTGCCCCCCATGCACCCAATTGCTACGCCTAAAATGTCATTGCGGCCTAAATCAACCGTACGTGCGATGTTCAACTTGGACCAGCAGTGAAGACAAGGACGCGTTGCTCTCTTGCGGGAATCAATGTCCGAAAAATTATGACTGTGGACATCGTTGCAAAGCGAACTGTCACCCGGGGCCTTGCCCCAATCCGGAACTTTGTAAAAAGAAGTTGAAGGTGCCGTGTAGTTGTAAACGGATTCGGAAAGAGTTTCAGTGCAGCGCGGTCAGGAACAATGAAGCACACGTTGATTGTGATGAAGTGTGCGTGCGAAAGATTGAAGAGGAGACAAAATTGAAAGACGCTGAAGCAGAGGAGAAGAAACGGGAACAGGAGGCGAAGAATGCTAAAGAATTAGAGTCGTTCCAGAAGAAATTTGGAGGGAAGAAAAAGTATAAGGACCGGAAGAGGGTGGATGTTGAAGTTGATTCGTTTTTGCAGAAGAATTGGATGTATATTCTTGCATTTGTTGTAGTTTTAATGACAATTTGTATTTATACATTCGTTTAA
- Protein Sequence
- MNTSGRDKPPKNPWNNPKPTSKIKPNPTERKFREAQIKLQVAVDKFAKDYESSSSEDDLESDNLIGSILKNYSQVGGQKENLGRTQAFLEDTLASGVATCLICIGSIKRIEKIWSCESCYCFFHLQCIERWSKDSVTQQKESLREQPQHEKPVEVKWGCPKCRFDYLPEQIPRVYICFCGKTVNPPFEPWLVPHSCGDTCGKQLKPYCGHDCILLCHPGPCPPCPKTVTVSCYCQAKPPKIQRCSNKEWSCGAPCHKLLECKKHPCPKSCHAGVCPPCSKRSKQKCLCGAQEQQRDCATPVWQCQKICGRSLSCGHHRCLLVCHAGPCAVCPLSKPRQCPCGKTICQLPCTQETPTCGDTCGKLLECGAHTCHSRCHKDKCSPCLEIVVKWCRCGLHEKEVQCKKQYLCDTKCKQMRDCNKHQCNRKCCDGNCPPCEKPCGRTLTCGLHKCPSVCHRGPCYPCTLTTLVKCRCGATSLTVPCGRKKRTRPPRCPKLCRNPPDCHHTVRTPHRCHFGECPSCRQICGQKLAKCNHLCPDQCHSAVLCKIKVEKATMPWEQRDGGVEKKCLPCQPCKVPVLVTCLGKHETCEWPCAQAEPRSCHRPCGRILACGNHTCGLNCHTVENSPNEELAGTNCEQCEHPCLASRPEGCLHECPNPCHAGPCPPCTQLLRLKCHCGLNQPYVRCSTWTSSEDKDALLSCGNQCPKNYDCGHRCKANCHPGPCPNPELCKKKLKVPCSCKRIRKEFQCSAVRNNEAHVDCDEVCVRKIEEETKLKDAEAEEKKREQEAKNAKELESFQKKFGGKKKYKDRKRVDVEVDSFLQKNWMYILAFVVVLMTICIYTFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01041416;
- 90% Identity
- -
- 80% Identity
- -