Ning014719.1
Basic Information
- Insect
- Nebria ingens
- Gene Symbol
- dmd-4
- Assembly
- GCA_018344505.1
- Location
- JADQWA010000719.1:303311-305176[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-25 4.6e-21 74.4 10.6 1 47 11 57 11 57 0.98 2 2 0.02 1.8e+02 2.1 0.9 29 35 265 271 263 276 0.88
Sequence Information
- Coding Sequence
- ATGCTTGCTGCGAATACGGGACGTAGTGCTCGAGTGCCCAAATGTGCCAGGTGCAGGAATCATGGGATGATTTCGAATTTAAGGGGTCATAAGAAAATGTGCGCTTATAAAACCTGTTTGTGTCCGAAGTGTAATCTTATCAAGGAACGCCAAAGAATTATGGCTGCTCAGGTAGCATTAAAACGCCAACAAGCCGCTGAAGATGCAATCGCCTTGCACCTAGCCTCCGCCGAAAGTGGTACCAATTACGAATACCTTCCCCCAGGTCGTATCTACGGCATGCAAGTCACCTCACCTTGTCCAATACCCCCGGAGAAAATAGACTCACCATCCCCTGTCGATAGCAACACATCAGACGACACAAAAGAAAAACCAATATCAGACTCATCATCCGAACCCGAAACCCAAAAACTCCCAATCAAACCCGATAGCATAATTGTCAGTCCCGCCTCAATAGAAATGCTAAGTAAACTATTCCCAAACAAGAAACGAGCTGTTTTAGAGCTCGTCCTCAAACGGTGCAATCACGACCTTTTAAAAGCGATCGAGCATTTTAATTCAAAAGCTACTCTACCACCAGAACTTCCTAATAGTGAACCACATAGTTCTGCATTTAAACCAGTAGGTTCTGGTAATAAGAAGATGGCGTTACCACCTGTAACTCACCCGTCGAGCGCTACTATACCGATATTAACGAGCAGCAAAGTGTTTATGCATAATTTTTATCCGTTTTTACCGTTATTCAACCCGCAACCCATGTTGCAAAACCCTGCGGTCTATGTGCCTGGATTATGTGAGTGTGATCAGTGTAAACATGGATTGTATGCACGGCTTGAGCCGAGACCATAA
- Protein Sequence
- MLAANTGRSARVPKCARCRNHGMISNLRGHKKMCAYKTCLCPKCNLIKERQRIMAAQVALKRQQAAEDAIALHLASAESGTNYEYLPPGRIYGMQVTSPCPIPPEKIDSPSPVDSNTSDDTKEKPISDSSSEPETQKLPIKPDSIIVSPASIEMLSKLFPNKKRAVLELVLKRCNHDLLKAIEHFNSKATLPPELPNSEPHSSAFKPVGSGNKKMALPPVTHPSSATIPILTSSKVFMHNFYPFLPLFNPQPMLQNPAVYVPGLCECDQCKHGLYARLEPRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01039260; iTF_01040899;
- 90% Identity
- iTF_01039260; iTF_01040899;
- 80% Identity
- -