Nbre004045.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- dmd-4
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000043.1:150589-152490[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-24 8.9e-21 74.4 10.6 1 47 11 57 11 57 0.98 2 2 0.04 3.4e+02 2.1 0.9 29 35 266 272 264 277 0.88
Sequence Information
- Coding Sequence
- ATGCTGGCTGCGAATTCTGGACGTAGTGCCCGAGTGCCAAAATGTGCCAGGTGCAGGAATCATGGGATGATTTCGAATTTACGGGGCCATAAGAAAATGTGCGCTTATAAAACTTGTTTGTGTCCCAAGTGTAATCTTATCAAGGAACGACAGAGAATTATGGCTGCTCAGGTAGCATTAAAGCGTCAACAAGCCGCCGAAGATGCAATCGCCTTGCACCTAGCCTCCGCCGAAAGTGGTACCAATTACGAATACCTTCCCCCAGGTCGTATCTACGGCATGCAAGTCACCTCACCTTGCCCAATACCCCCGGAGAAAACAGACTCGCCATCCCCTGTCGATAGCCACACATCCGACGACACAAAAGAAAAACCATTAATATCAGACTCATCATCCGAATCCGAAACCCAAAAGCTCCCAATCAAACCCGATAACATAATCGTTAGTCCCGCCTCAATAGAGATGCTAAGTAAACTATTCCCGAACAAAAAACGAGCTGTTTTAGAGCTAGTTCTTAAACGGTGCAATCACGACCTTTTAAAAGCGATCGAGCATTTTAATTCGAAAGCTACCCTTTCACCAGAGGTTCCTAATTGCGAACCACATAGTTCTGCATTTAAACCAGTAGGTTCTGGTAATAAGAAAATGACATTACCACCTGTAAGTCATGCGACGAGCGCAACTATACCGATATTAACGAGCAGCAAAGTGTTTATGCATAATTTTTATCCATTTTTACCGTTATTCAACCCGCAACCTATGTTGCAAAACCCTGCGGTCTATGTGCCTGGATTATGTGAGTGCGATCAGTGTAAACATGGATTGTATGCGCGACTTGAACCAAGACCGTAA
- Protein Sequence
- MLAANSGRSARVPKCARCRNHGMISNLRGHKKMCAYKTCLCPKCNLIKERQRIMAAQVALKRQQAAEDAIALHLASAESGTNYEYLPPGRIYGMQVTSPCPIPPEKTDSPSPVDSHTSDDTKEKPLISDSSSESETQKLPIKPDNIIVSPASIEMLSKLFPNKKRAVLELVLKRCNHDLLKAIEHFNSKATLSPEVPNCEPHSSAFKPVGSGNKKMTLPPVSHATSATIPILTSSKVFMHNFYPFLPLFNPQPMLQNPAVYVPGLCECDQCKHGLYARLEPRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01040147;
- 90% Identity
- iTF_01040147;
- 80% Identity
- -