Nbre025103.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- ARID5B
- Assembly
- GCA_944739395.1
- Location
- CALYJC010001427.1:10549-13965[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-23 9.2e-20 71.7 0.0 2 89 126 211 125 211 0.94 2 2 1.8 4.9e+03 -1.1 0.0 2 25 829 852 828 860 0.75
Sequence Information
- Coding Sequence
- ATGAAGAGACTGGAAGGTGTCGAAGATAAATGGCTAAAAAATTCACTGGTAGCCGCACTCGGTGGTTTCACTGTTCCAAATAAAAATACCCGCGTCCTCTTTTGTCGAGACACATTTGACTATCCCGATTTAGAAGGACATGAACTATTGTGCAATCATCTAGCGCCTAAATTGAAAGGCCGACCTAGAGGGAAAAGAAAAAAGCGAAGCTTATCGCCGGGTGGGTCCGAAAGTAATGAATCTGAATCATCCGTATCAGCATTTGCATCGGCATCAATAAAGACAAGACTGACAACAGCTGGAGGCAGAAATGGTTTGCGCTGCAACAGCACAACTTCACCTCGCCGCAGTACAAGAAGTGCAGAAAATATTGAAGAACGTGATTTCTTAAATAACTTACATGCGTATATGAAATCACATCATACGCCTATTGGACGAATACCATCAATAGGATACAAAGAAAttgATTTGCACGCATTTTTCACAAAAGTACAAAAAGTTGGTGGCTATGAAAGTTGTACAGCAAATCGAATGTGGAAACCCATTTTTGATGAACTTGGAGGCAATCATAATAGTACTAGCGCAGCTACGATAACGCGAAGACACTACGAAAGATTACTATTATCTTTTGAAAGACATATCAAAGGAGAAGAATATAAACCTTTACCAATCTCCGAACGGCGCCGACTGAAGAGTAAAACATCAAGCTTTAGCGACGCTGAAAGTACTGAAGGAGATCGGTCAAGTAGTGGTAAGAGTACTCCAGTACCATCATCTTCAATTCTATTGCCAGTCACACCTACAACGCCTGTAACTCCCACTGAAGTCAAAGAATTCAGTGTACCTGAAAAAACTAAAACCGAAGGCAAAGTCTCCTCGTTGCGAAGTGTTCGTGTTAAACCGGAAAGGCTTCGAGAGAACTCACAAAAAGATAAACCAATACAAATTTTACCACCAGAGACAAACACAAGTAGCTTActggaaaaaaatattttgaacgtTCCCGTGATGGCAGCAGTTACACCAGTAGTAGAAAACATTTTACCTGAGACAGCTGTTTCACCATTGGAAGGTAAAGATAACATTCCTGCTACGAGTATCACAGAAACAAGTAGTATAGCCCAGACGCGAATAGACGATGATGATGACGAAATAATTGAAGTACCGTACAAACCTAAAACTCCTGAAATCATAGATTTGGACCTTGTACCAGATCTGGAACCGGAACCGGAACCTAATAGTGTTATTACGAATAATGCAATGCTTTATGATGTTAAGAAACGGAAGTTGGAGATATTGAAAGAAGGTGGCCTTGAGGTTACAGCCATTGGTGTAGATGCAATGAAAGATGGACGTTTGACTGTTATACATCCTGGGGTAATTCCCATTACGCCTAAAACAGAATTGGGTAATTTATCAATTACAGTTACATCAGATTCACGTCGAATGCCACCGCCCGTACCCCGATCTCAATCACCTAAAAAAGCAATGGTACCAAACCCATATCTAGGATATCCTATCCAGATTTCAGAAGCTCTAATTCCACGGCGAGACATACTGAATCCCAAATTTGTTGCTGCAGCACCCATTAAACCAATACCAAATGGAAACTCGCCACCGAAAGTCATACAATCTCGATCTATTTACAGTTATTCTGAACGAACAGTATATGGCAACCCGAAAGATCCTTTCATGCCCCCACCACACACGATACCAGTAATCCGCAATATTATACGAAGTCCAACTAAACCTAGTGGGGGTGAAATATTagatttaacaataaaaaatcctCAAAAACCAGTCGTGGAAATAGTTCGTGTACCAACTGTAACTCGACCTGCTCGCGCTCCCAAGGAGCATTCTGTAAAAAACTTTTTGAAAAACAGTGCTGCAGGTCTACCTCTAATAGACGGGCGCGTAGGTTCGAACTTGGAAATAACTTTAGTCAGTGCAGCAGCTAAAAACGTTCAAAACGTACCATCGCAAAACCATGCAAGGCAACCATCATATATAAACAGTCGACCGTCTCTGAAACGGTCCTCAGCTGGTGGTAAGCCTTCAAAAAACAAACCTGATCCACATTATGCTAATAGTCGACACGCAATGAACGATTATCAAATACACAGTATACCGCATACGAAACAAAATGGGGGACCAGGTTTAGTGGTGCCAGCACCTCACAGTATTGGTAGCGCAAGATCAAATTATCCCAAATCTGATCTTATTCCTCATTCGAAATctcaacagcaacagcaacatcaACAATCCGTACCCGCCCAAACAGCGTCAAGTCTCAATCCATTCTTATATCCTGGTTACTTAAATCAATTGAGTGCAGCTGCAACAGCGAATAAAAGTATGCAACCACCGTATCTTCCTATGTTAGATCCCTTGTACTACTCAGCGCTATGTTCGCAAGGATTATACCAACCTGGACCAATGGCAGCACCCCCACCTATGTTCCCACCAGTTCCCTCCGTTGATCAGTTACAATTTTACAAAGATTTAATGGCGCACAGCGCACGTGGACGTTACCCTTTCCCGCCAATGCCGCAAGATGTTAACCAGTCTATAACGTGCGTAGGACAATCGAATAATCCAAAtgtgaaaaaataa
- Protein Sequence
- MKRLEGVEDKWLKNSLVAALGGFTVPNKNTRVLFCRDTFDYPDLEGHELLCNHLAPKLKGRPRGKRKKRSLSPGGSESNESESSVSAFASASIKTRLTTAGGRNGLRCNSTTSPRRSTRSAENIEERDFLNNLHAYMKSHHTPIGRIPSIGYKEIDLHAFFTKVQKVGGYESCTANRMWKPIFDELGGNHNSTSAATITRRHYERLLLSFERHIKGEEYKPLPISERRRLKSKTSSFSDAESTEGDRSSSGKSTPVPSSSILLPVTPTTPVTPTEVKEFSVPEKTKTEGKVSSLRSVRVKPERLRENSQKDKPIQILPPETNTSSLLEKNILNVPVMAAVTPVVENILPETAVSPLEGKDNIPATSITETSSIAQTRIDDDDDEIIEVPYKPKTPEIIDLDLVPDLEPEPEPNSVITNNAMLYDVKKRKLEILKEGGLEVTAIGVDAMKDGRLTVIHPGVIPITPKTELGNLSITVTSDSRRMPPPVPRSQSPKKAMVPNPYLGYPIQISEALIPRRDILNPKFVAAAPIKPIPNGNSPPKVIQSRSIYSYSERTVYGNPKDPFMPPPHTIPVIRNIIRSPTKPSGGEILDLTIKNPQKPVVEIVRVPTVTRPARAPKEHSVKNFLKNSAAGLPLIDGRVGSNLEITLVSAAAKNVQNVPSQNHARQPSYINSRPSLKRSSAGGKPSKNKPDPHYANSRHAMNDYQIHSIPHTKQNGGPGLVVPAPHSIGSARSNYPKSDLIPHSKSQQQQQHQQSVPAQTASSLNPFLYPGYLNQLSAAATANKSMQPPYLPMLDPLYYSALCSQGLYQPGPMAAPPPMFPPVPSVDQLQFYKDLMAHSARGRYPFPPMPQDVNQSITCVGQSNNPNVKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01039011; iTF_01040637; iTF_01039906; iTF_00872842;
- 90% Identity
- iTF_01039011; iTF_01040637;
- 80% Identity
- iTF_01039011;