Nsal005369.1
Basic Information
- Insect
- Nebria salina
- Gene Symbol
- ARID5B
- Assembly
- GCA_944039265.1
- Location
- CALUEJ010000033.1:492915-496776[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-23 9.5e-20 71.7 0.0 2 89 158 243 157 243 0.94 2 2 1.6 5e+03 -1.2 0.0 2 25 863 886 862 894 0.75
Sequence Information
- Coding Sequence
- ATGGATTTTATAATTGACATAGAGCAAGAATCAAAAGGTCCGTCTGTGATAGTACTAAGTTACTCCCGTTATTGCCGATACCGTTCGTTGATGAAGAGACTGGAAGGTGTCGAAGATAAATGGCTAAAAAATTCACTGGTAGCCGCACTCGGTGGTTTCActgttcaaaataaaaatacccgCGTCCTCTTCTGTCGAGACACATTTGACTATCCCGATTTAGAAGGACATGAACTATTGTGCAATCATCTGGCGCCTAAATTGAAAGGCCGGCCTAGAGGGAAAAGAAAAAAGCGAAGCATATCGCCGGGTGGGTCCGAAAGTAATGAATCTGAATCATCCGTATCAGCATTTGCATCGACATCGGCATTAATAAAGACAAGACTGACAACAGCTGGAGGCAGAAATGGTTTGCGTTGCAACAGCACAACATCTCCTCGCCGCAGTACAAGAAGTGCAGAAAATATTGAAGAACGAGATTTCTTAAATAACTTACATGCGTATATGAAATCACATCATACACCTATTGGACGTATACCATCAATAGGATACAAAGAAAttgaTCTGCACGCATTTTTCACAAAAGTACAAAAAGTTGGTGGCTATGAAAGTTGTACAGCTAATCGGATGTGGAAACCCATTTTTGATGAACTTGGAGGCAATCATAATAGTACTAGCGCTGCTACAATAACGCGAAGACACTACGAAAGATTACTATTATCTTTTGAAAGACATATCAAAGGAGAAGAATATAAACCTTTACCAATCTCCGAAAGGCGCCGACTGAAGAGTAAAACATCAAGCTTTAGCGACGCTGAAAGTACTGAAGGAGATCGGTCAAGTAGTGGCAAGAGTACTCCAGTACCATCATCTTCAATTCTATTGCCAGTCACACCTACAACGCCTGTAACTCCCACTGAAATCAAAGAATTCAGTGTACCTGAAAAGACTAAAACAGAAGGAAAAGTCTCCTCGTTGCGAAGTGTTCGTGTTAAACCGGAAAGGCTTCGAGAGAACTTACAAAGAGATAAACCAATACTAATTTTACCACCAGAGACAAACACAAGTAGCTTActggaaaaaaatattttgaacgtTCCCGTGATGGCAGCAGTTACACCAGCAGTAGAAAAAATTTTACCCGAGACAGCTGTTTCACCATGGGAAGGTAAGGATAACATTCCTGCTTCGAGTATAACAGAAACAAATAGTATAGCCCAGTCGCTACCAGACGATGATGATGACGAAATAATTGAAGTACCGTACAAACCTAAAACACCTGAAATAATAGATTTGGACCTTGTACCAGATCTGGAACCGGAACCGCAACTGGAACCTAATAGTGTTATTACGAATAATGCAATGCTTTATGATGTTAAGAAACGGAAGTTGGATATATTGAAAGAAGGTGGCCTTGAGGTTACAGCCATTGGTGTAGATGCAATGAAAGATGGACGTTTGACTGTTATACATCCTGGGGTAATTCCTATTACGCCTAAAACAGAATTGGGCAATTTATCAATTACAGTTACATCAGATTCTCGTCGAATGCCACCGCCCGTACCCCGATCTCAATCACCTAAAAAAGCTATGGTACCAAACCCATATCTAGGATATCCTATCCAGATTTCTGAAGCTCTAATTCCACGGCGAGAAATACTGAATCCCAAATTTGTTTCTGCAGCACCCATTAAACCAATACCAAATGGAAACTCGCCACCGAAAGTCATACAATCTCGATCTATTTACAGTTATTCTGAACGAACAGTATATGGAAACCCGAAAGATCCTTTCATGCCCCCACCACACACGATACCAGTAATCCGCAATATTATACGAAGTCCTACTAAACCTAGTGGGGGAGAAATATTagatttaacaataaaaagtcCTCAAAAGCCAATCGTGGAAATAGTTCGTGTACCAACTGTAACTCGACCTGCTCGCGCTCCCAAAGAGCATTCTGTAAAAAACTTTTTGAAAAACAGTGCTGTAGGTCTACCGCTAATAGACGGGCGCGTAGGATCGAACTTGGAAATAACTTTAGTCAATGCAGCAGCTAAAAACGTTCAAAACGTACCATCTCAAAACCATGCAAGGCAACCATCATATATAAACAGTCGACCGTCTCTGAAACGGTCCTCAGCTGGTGGTAAGCCTTCAAAAAACAAACCTGATCCACATTACGCTAATAGTCGACACGCAATGAACGATTATCAAATACACAGTATACCGCACACGAAACAAAATGGGGGGCCAGGTTTAGTGGTACCAGCACCTCACAGTATTGGTAGCGCAAGATCGAATTATCCTAAATCCGATCTTATTCCTCATTCTAAATCTCAACAGCAACATCAACATCAACAATCCGTACCCGCCCAAACAGCTTCAAGTCTCAATCCATTCTTATATCCTGGTTACTTAAATCAATTGAGTGCAGCTGCTACAGCGAATAAAAGTATGCAACCGCCGTATCTTCCTATGTTAGATCCCTTGTACTACTCAGCGTTATGTTCGCAAGGATTATACCAACCTGGACCTATGGCAGCACCCCCACCTATGTTCCCACCAGTCCCTTCCGTTGACCAGTTACAATTTTACAAAGATTTAATGGCGCACAGCGCACGTGGACGTTACCCTTTCCCGCCAATGCCCCAAGATGTTAACCAGTCTATAACGTGCGTAGGACAATCGAATAATCCAAATGTGAAAAAATAG
- Protein Sequence
- MDFIIDIEQESKGPSVIVLSYSRYCRYRSLMKRLEGVEDKWLKNSLVAALGGFTVQNKNTRVLFCRDTFDYPDLEGHELLCNHLAPKLKGRPRGKRKKRSISPGGSESNESESSVSAFASTSALIKTRLTTAGGRNGLRCNSTTSPRRSTRSAENIEERDFLNNLHAYMKSHHTPIGRIPSIGYKEIDLHAFFTKVQKVGGYESCTANRMWKPIFDELGGNHNSTSAATITRRHYERLLLSFERHIKGEEYKPLPISERRRLKSKTSSFSDAESTEGDRSSSGKSTPVPSSSILLPVTPTTPVTPTEIKEFSVPEKTKTEGKVSSLRSVRVKPERLRENLQRDKPILILPPETNTSSLLEKNILNVPVMAAVTPAVEKILPETAVSPWEGKDNIPASSITETNSIAQSLPDDDDDEIIEVPYKPKTPEIIDLDLVPDLEPEPQLEPNSVITNNAMLYDVKKRKLDILKEGGLEVTAIGVDAMKDGRLTVIHPGVIPITPKTELGNLSITVTSDSRRMPPPVPRSQSPKKAMVPNPYLGYPIQISEALIPRREILNPKFVSAAPIKPIPNGNSPPKVIQSRSIYSYSERTVYGNPKDPFMPPPHTIPVIRNIIRSPTKPSGGEILDLTIKSPQKPIVEIVRVPTVTRPARAPKEHSVKNFLKNSAVGLPLIDGRVGSNLEITLVNAAAKNVQNVPSQNHARQPSYINSRPSLKRSSAGGKPSKNKPDPHYANSRHAMNDYQIHSIPHTKQNGGPGLVVPAPHSIGSARSNYPKSDLIPHSKSQQQHQHQQSVPAQTASSLNPFLYPGYLNQLSAAATANKSMQPPYLPMLDPLYYSALCSQGLYQPGPMAAPPPMFPPVPSVDQLQFYKDLMAHSARGRYPFPPMPQDVNQSITCVGQSNNPNVKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01039012;
- 90% Identity
- iTF_01039012;
- 80% Identity
- -