Nbre011821.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- ARID5B
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000211.1:1-3575[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-23 9.5e-20 71.7 0.0 2 89 148 233 147 233 0.94 2 2 1.9 5e+03 -1.1 0.0 2 25 851 874 850 882 0.75
Sequence Information
- Coding Sequence
- CAAGAATCAAAAGGACCGTCTGTGATAGTACTAAGTTACTCCCGTTATTGCCGATACCGTTCGTTGATGAAGAGACTGGAAGGTGTCGAAGATAAATGGCTAAAAAATTCACTGGTAGCCGCACTCGGTGGTTTCACTGTTCCAAATAAAAATACCCGCGTCCTCTTTTGTCGAGACACATTTGACTATCCCGATTTAGAAGGACATGAACTATTGTGCAATCATCTAGCGCCTAAATTGAAAGGCCGACCTAGAGGGAAAAGAAAAAAGCGAAGCTTATCGCCGGGTGGGTCCGAAAGTAATGAATCTGAATCATCCGTATCAGCATTTGCATCGGCATCAATAAAGACAAGACTGACAACAGCTGGAGGCAGAAATGGTTTGCGCTGCAACAGCACAACTTCACCTCGCCGCAGTACAAGAAGTGCAGAAAATATTGAAGAACGTGATTTCTTAAATAACTTACATGCGTATATGAAATCACATCATACGCCTATTGGACGAATACCATCAATAGGATACAAAGAAAttgATTTGCACGCATTTTTCACAAAAGTACAAAAAGTTGGTGGCTATGAAAGTTGTACAGCAAATCGAATGTGGAAACCCATTTTTGATGAACTTGGAGGCAATCATAATAGTACTAGCGCAGCTACGATAACGCGAAGACACTACGAAAGATTACTATTATCTTTTGAAAGACATATCAAAGGAGAAGAATATAAACCTTTACCAATCTCCGAACGGCGCCGACTGAAGAGTAAAACATCAAGCTTTAGCGACGCTGAAAGTACTGAAGGAGATCGGTCAAGTAGTGGTAAGAGTACTCCAGTACCATCATCTTCAATTCTATTGCCAGTCACACCTACAACGCCTGTAACTCCCACTGAAGTCAAAGAATTCAGTGTACCTGAAAAAACTAAAACCGAAGGCAAAGTCTCCTCGTTGCGAAGTGTTCGTGTTAAACCGGAAAGGCTTCGAGAGAACTCACAAAAAGATAAACCAATACAAATTTTACCACCAGAGACAAACACAAGTAGCTTActggaaaaaaatattttgaacgtTCCCGTGATGGCAGCAGTTACACCAGTAGTAGAAAACATTTTACCTGAGACAGCTGTTTCACCATTGGAAGGTAAAGATAACATTCCTGCTACGAGTATCACAGAAACAAGTAGTATAGCCCAGACGCGAATAGACGATGATGATGACGAAATAATTGAAGTACCGTACAAACCTAAAACTCCTGAAATCATAGATTTGGACCTTGTACCAGATCTGGAACCGGAACCGGAACCTAATAGTGTTATTACGAATAATGCAATGCTTTATGATGTTAAGAAACGGAAGTTGGAGATATTGAAAGAAGGTGGCCTTGAGGTTACAGCCATTGGTGTAGATGCAATGAAAGATGGACGTTTGACTGTTATACATCCTGGGGTAATTCCCATTACGCCTAAAACAGAATTGGGTAATTTATCAATTACAGTTACATCAGATTCACGTCGAATGCCACCGCCCGTACCCCGATCTCAATCACCTAAAAAAGCAATGGTACCAAACCCATATCTAGGATATCCTATCCAGATTTCAGAAGCTCTAATTCCACGGCGAGACATACTGAATCCCAAATTTGTTGCTGCAGCACCCATTAAACCAATACCAAATGGAAACTCGCCACCGAAAGTCATACAATCTCGATCTATTTACAGTTATTCTGAACGAACAGTATATGGCAACCCGAAAGATCCTTTCATGCCCCCACCACACACGATACCAGTAATCCGCAATATTATACGAAGTCCAACTAAACCTAGTGGGGGTGAAATATTagatttaacaataaaaaatcctCAAAAACCAGTCGTGGAAATAGTTCGTGTACCAACTGTAACTCGACCTGCTCGCGCTCCCAAGGAGCATTCTGTAAAAAACTTTTTGAAAAACAGTGCTGCAGGTCTACCTCTAATAGACGGGCGCGTAGGTTCGAACTTGGAAATAACTTTAGTCAGTGCAGCAGCTAAAAACGTTCAAAACGTACCATCGCAAAACCATGCAAGGCAACCATCATATATAAACAGTCGACCGTCTCTGAAACGGTCCTCAGCTGGTGGTAAGCCTTCAAAAAACAAACCTGATCCACATTATGCTAATAGTCGACACGCAATGAACGATTATCAAATACACAGTATACCGCATACGAAACAAAATGGGGGACCAGGTTTAGTGGTGCCAGCACCTCACAGTATTGGTAGCGCAAGATCAAATTATCCCAAATCTGATCTTATTCCTCATTCGAAATctcaacagcaacagcaacatcaACAATCCGTACCCGCCCAAACAGCGTCAAGTCTCAATCCATTCTTATATCCTGGTTACTTAAATCAATTGAGTGCAGCTGCAACAGCGAATAAAAGTATGCAACCACCGTATCTTCCTATGTTAGATCCCTTGTACTACTCAGCGCTATGTTCGCAAGGATTATACCAACCTGGACCAATGGCAGCACCCCCACCTATGTTCCCACCAGTTCCCTCCGTTGATCAGTTACAATTTTACAAAGATTTAATGGCGCACAGCGCACGTGGACGTTACCCTTTCCCGCCAATGCCGCAAGATGTTAACCAGTCTATAACGTGCGTAGGACAATCGAATAATCCAAAtgtgaaaaaataa
- Protein Sequence
- QESKGPSVIVLSYSRYCRYRSLMKRLEGVEDKWLKNSLVAALGGFTVPNKNTRVLFCRDTFDYPDLEGHELLCNHLAPKLKGRPRGKRKKRSLSPGGSESNESESSVSAFASASIKTRLTTAGGRNGLRCNSTTSPRRSTRSAENIEERDFLNNLHAYMKSHHTPIGRIPSIGYKEIDLHAFFTKVQKVGGYESCTANRMWKPIFDELGGNHNSTSAATITRRHYERLLLSFERHIKGEEYKPLPISERRRLKSKTSSFSDAESTEGDRSSSGKSTPVPSSSILLPVTPTTPVTPTEVKEFSVPEKTKTEGKVSSLRSVRVKPERLRENSQKDKPIQILPPETNTSSLLEKNILNVPVMAAVTPVVENILPETAVSPLEGKDNIPATSITETSSIAQTRIDDDDDEIIEVPYKPKTPEIIDLDLVPDLEPEPEPNSVITNNAMLYDVKKRKLEILKEGGLEVTAIGVDAMKDGRLTVIHPGVIPITPKTELGNLSITVTSDSRRMPPPVPRSQSPKKAMVPNPYLGYPIQISEALIPRRDILNPKFVAAAPIKPIPNGNSPPKVIQSRSIYSYSERTVYGNPKDPFMPPPHTIPVIRNIIRSPTKPSGGEILDLTIKNPQKPVVEIVRVPTVTRPARAPKEHSVKNFLKNSAAGLPLIDGRVGSNLEITLVSAAAKNVQNVPSQNHARQPSYINSRPSLKRSSAGGKPSKNKPDPHYANSRHAMNDYQIHSIPHTKQNGGPGLVVPAPHSIGSARSNYPKSDLIPHSKSQQQQQHQQSVPAQTASSLNPFLYPGYLNQLSAAATANKSMQPPYLPMLDPLYYSALCSQGLYQPGPMAAPPPMFPPVPSVDQLQFYKDLMAHSARGRYPFPPMPQDVNQSITCVGQSNNPNVKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01039012;
- 90% Identity
- iTF_01039012;
- 80% Identity
- iTF_01039012;