Basic Information

Insect: Nasonovia ribisnigri
Gene Symbol: jarid2b
Assembly: GCA_027563275.1
Location: JANEHQ010001476.1:16644-30310[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.6 3.7e+03 -0.8 0.0 22 68 995 1041 986 1054 0.79

2 3 1.4e-20 3.4e-17 63.5 0.0 6 89 1546 1627 1542 1627 0.93

3 3 8.2 1.9e+04 -3.1 0.0 49 63 1641 1653 1637 1668 0.75

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.6	3.7e+03	-0.8	22	68	995	1041	986	1054	0.79
2	3	1.4e-20	3.4e-17	63.5	6	89	1546	1627	1542	1627	0.93
3	3	8.2	1.9e+04	-3.1	49	63	1641	1653	1637	1668	0.75

Sequence Information

Coding Sequence: ATGTCTTCTAATGGGTCAGATGCAAAGAAACGCAAACTGCTGAACAATGAAGAAGCTATTCTCGAGTCGAGTACTAAAAAAATCAAGGTACAAGCTCAGCGTAAATTTGCCCAAAATGCTGTGTTACCCACCAGCACTGCACAGAAACCTATTCAGACTTCAGTGGTGCCTAACAATGTGACTAAACCTCCAATTAAACGGCCAAATACTGAAGACTTTCTTACCTTCCTTTGTTTTAGAGGTACAAGTTTATTACCACCACGACTAGATTTCTTCAATAAACCTCAACGCTCTCTATCGGCACAAGAGATTGCTGCTGGAAAAAAAAGAAGAAAAAGCACTCCTATACTGCCAGTAACTAATGCAAATAATCCATATAATGTAAATAGTGTAAATAATGAATCAATTGAACGAAAAAAGATTAGTCAGTTACCACAGACCAAGTTTCCATTATCTAAACTAGGACATAAAGTTATGGGTCGAAAGTTGGTAAGGTCCACTTCAAGGTATACTGTTCGCCAAGAAGCTCTCACATTACGTCAATTAGCCCTTCGTCACGTTCCAAAAATAAAAAAACCAATGTCAAAAGTTATTAAACCTTTAGTAAAAGAAAATAATAAAACTAAAATTGAGAAAAATGGAAAACAAGTGTCATTAGACGGTAAGCAAATACAAAAGTTGAAAGGCCGTATAACCCGATCAAATTCTTTACCGAGTATATTTTGTCCTGCGATAAATCAACTTAGAGATGACAAAGGAAAATGGTGTAAAGGGAGTTGTAGTAATAAACCTTCTTCAAAAACATCATCTGATGATTCAAAGGATGTCGAAGAAGAAAGACCATCGAGAAAAAAGACTGCATCAAACAATTTAGATCATAGAAGTAATAGTCTGGGTAACATGAAACGAAAGACTAGTATTGTTAAATGTAAAGTGGAAAATAAAAATAACAGAAAAACTAGAAGTTTAGCGAGTAAACATAAGAACAGCGACCAAGATAATTATGTTGTTCCTGATAAGAAGTGTGATAAGAATTTGAAGACTGTATCTAAGAGTAACAGAGCAAACAGTTTAATTGAAACAAAATTAACTGTGGATGTGAAAAGAAGGACATCTTCTGTGGATAACATGAAAACCACTCACGAGAGTAAAGATATAATTAGTTCAACTCGTTCAAGGCCCCCTAGAAGAACTAAAGAAGCTGCCACTTTATTTATGGAAATGTTACGAAAAGATATGCGGTGCCCTGATGAGCAAGAAGAAGATGATTCGTCATCCGTTGAGAGTTTTCCTGACCTTCCCAATACACGAATAAACGGTAATATTTCAGTTGACACTTCTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCAGAACAACGTGAACGTGAATTGAAGGTGTTTTCCAAGCAAAACAAAATTGATAAACAACTATTAGAACAACAGTTATGTGAAAAAAAGGATGATAAAATATTACCACTAGTGACTGATAGTAAAAAGACAAAATTCATTGACAAAAAAAAGGTTAATAAGTTGAAAAAAAAGGTTGATGTGAAAACTCTGGAAAAGAAAAAGATGAAAGACGTTATTGAGACAATTAAATTTACTGAAAACAGTGGAACAGCATCATTTAAAAGAAATCTGAGGCCTCGCCGTTCCTCTACAATGTTAGATGATTATATTATCATGACTGATTCGGATGAGGACGACATGAAATGTGAACCTGTTATAGAGGTGACAAAATGTGAAGCTCCTAAACTTTCAACCAAAACGACAACTATGGCAGGGGAATCAAAATCTCAAAAATGTAAGTTAAGTACTGACGAATCTGTTAAAAAAAATCTTAAAATCAATAAGACTGACTTGAAACCGAAAAAAGATTTGAATAAAGATTCTGAAGTGAAAAAAAGTCTTTCTGAAACTAAGTCAAAAAGTATTTTATTAAAATGTGACAAAGAGCTAGAAATCAAGAATATTAAAAATACTGCTGTCGATAAAAAAAATGAAAGATCGTCCAAAAATAAGACTGAAATCGTAGTAATTACTAAAGAACCAAAAACTACCGGTATTGGTTCTAAAAACGCCGGTAAAAAAGTGCCACCCTCTAAGCAACAGTCGACAAAAAAGGAAAACTCCTCAAACAAGAAAACATCCAATTTAGATGTTTATAATAACAATAACAACAATAAAAAAAAACGGTCTACATCATCGTCGTCGGTGACGTCTTCGTCATCTTCCATGTTTAGCGGAATTACTAGTCAAACAAAAGAAGAGCTTTTAGAACGCATGGCCGCAAATTTTGATGCCAAACATACCGCTAGTGAAGGAGCCAATAAAGTGAAGTTGACAGCAACGGCAGAAAGCAACAATGGTTCAGCTGCGAAAAAACTTGTGGAAAGCGGCGTGATTGAAAAAAATTTACAGAGTGGTAATATTGTGGAAAAAAAAGCAGCTAGTGAAGTTAATTCAGTAAATAATGAATTGGCAAAGAAGAAACAAGTGTTGGAAAAAATTTCAAAAACGGAGAACTTAGTTACAGTGCCAAAAGAAGAAAACTCCAATGTGACAGCCGAAAAAGTAGAAAACGTGGTTATGGTTGTCGACAAGGTTGAGAAAACCGAATCTATGCTAGTGCCATTAAACAAAGTAGAAAAAGTGGAAAACATGGTGTTCCAAACCATAGCAAAAGATCTTTTCTTGGGGCAGCAGAAAGAGATCAAGATCACCATACCTGAATACTTATCCGGTAAAAACTTCCAGTTAGACAACAGGTTTAAACAAGACGATGGGCTTTCTGTATTATCCGAGATCTGTAGTGCCCTGCCTAGGTTTAACGAACCGTATGTGTCCAGTAGACAGCTGTTAAACAAGGTGCCGGCACCTGGGGATAGTAGCTTTGTGAAGTATGGTCCGCCAACAATAAGCGGAGACGAGAAGTCTTCAGTATTGACACTGGCGCCACCAGCATTTGAAAGTCGCACCGTCAAAATTGTCAACTTGGCGCGTAGCAGCAGCTCGTCTGAGGCAAACGACAAAAATGATTTGGCCGCGTCTTGGAGACGAGCTTTCAAAAACGTAAAATTACCAAAAAATGGAATCGTCTCATCGGCCGTGTCGGTTGGCAATAATTTGATTGCTTGGACAAAAAAGAAACAAAATGACAATCAAATACCGCTACCGAAGACATACACTGATGGTATTGATGGCGGCGATAATTGTGATACAAAAGAAATAGTTTCCAATAGTAATTCAATGAAAAACACTCTTCAGTCATCACCTGTGAATGGTATCACTGAAAAGAAATCTGAACCTTCTAATAAATGCCAAACGACTTGCTTCGGAGAATTGAAAACCATAGAAATGATGGATTGCAAAAAAACTGTGCCGGCATCAGCTCCTAACAATGCGTCTTATTTAGCTAAAACAACAATATTGAGCAGTACAAAGTATGATTTGAAATTTGAAAAACGTTCCTCTTCTGCTGCAACAGCGACTATGGCAGTGCCCATCAGCCTAGAAAAACAACAACAAATACGCAAAGACGTCGTGGGAGACGTGTCATCTTCGGATGATCAGAGTCCGGAGAAGAAAATATTCCATCAGCGGCGGCTGTCGACTACCCAGTCATGTAGCGGAAACAGTTCCGATGCCTTCTCACCTGATAACGAGACGAGTGTTTATGCTTTTCAACCTGACCTTCCGATAGCCAGCACCCCTTTCCGTCGGAACAAACCCCAATCGCCAGCAAAGTCCAGGACGGTTTCGCCCAACACGTCAATCGCTGTGAGTATTGAAAACGATTCTATGGAAGAAAAATCTCATCAGTCCACCGTGTCATCAACGACAACAGACGTTGATAGTGAAGAAGGACGTCTTTTTTACATACCGTTACCAGCTGGTGTTCGGGCTCAACCAATGATTCAAGGTGTCACGGTCAAGCTTGGCACAGAAGGACCCCAGAAAAAATTAGTGATGAGTGCTAAGCTAGTAACCAAACCCCCGGCATCTACGATACCAGTCAGTTCCATATCGCCAAAACCCGAGCGGAAAATCAAACCGCTGTGCACAACGAAAATAACCAACAGCACAACCCCCGTCGGCACTGTGCAACCTACTACTAGAACTATTCAGCCCCCAAAGTGTACTCCCTCAACTTCGAAACAAGTGTCACCGTTGTTGCCACAGCCACAAATCCCGGAAACGAAAGATGATAAGAAACGGTTACAACAAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAATCTAAAAAATCATCATCTGCCACTAATAACAAGAAACAAAAAAAGACTGAAAAACAAGTTAACAATAAGAGGAAGTCTAGCGAAAAAGTTGCTTCTAAAAAAAAATTAGCAAAAGAACATGCTCACATGTTGGATGCGCCGACATTTTATCCATCTGAAGAAGACTTCAAGGATCCTTTAGAATATTTTGAAATCATAAAACCCATTGCTCAAAAGTATGGTATATGCAGAGTCCCGGAATGCAAAGTCAGCGACGACATGCGTTTCACGGCGTACAACCAGTATGTGCACAAGATGATGAACCGTTGGGGCCCAAACGTCCGCGAAATGATGGCCATGAAAAAGTACCTAGAAACGCAGTCTATAGTCTTATCCAACCCGCCGCTCATTGGTGGCATGGAATTAGATTTACCCAAGCTGTACCATACGGTACAGGAGCTTGGCGGACTCAAGGAAGTGATAGAACTGGACAAGTGGTGTCGTGTCGCCGACTTGATGAAGATCCCGAAGAGTGCTCAAGACCGCGTCACTAAACTTGATGACATTTACTGCAAATATCTTTTGCCGTATGACACACTCTCGCACGATGAACGCCAAAAGTTAATCGCAGAAGTGGACAAAGAGTGGAAACAGATCTGCAAGAAAGGTGACACTGATGACGAGCTGTATGAAGACGTCAACGATTGTATAGCAAAGggtcgaagtatcgctttgagcgcttactaccgcgtagCGCGCAACACCGTTGCCATGTGGTTCAAGGAACAGCAACAGCAACAACAACCGTCGGGTGGCCACTCGTCATCGACGTCAACTGCAGCAGCGACAGTGATACGGGCTGAAGACGTTGAGTCACTCTATTGGAAAAACGTGCAGGATAGGAAGAACCACATATGCGTACTGTCCGGTTCGATTGATTCGGGTGCCGAGGGCTATGGATTCCCGACAACCAAAACGGCTACGTTCACCAAACACCCGTGGAACTTGAAAGTGCTCACTAACAACCCGGAGTCTGTGCTTAAATCGCTGGGCCCGGTGATGGGCATGACTGTGCCCACTATACACATGGGCATGGTGTTCTCGGCATGCTGCTGGTACAAGGACCCGCATGGGTTGCCATGGATTGAGTACCTGCATACAGGCGCTGATAAGGTGTGGTACGGCGTGCCATCTAGTCAGAGCGACCTGTTCCGGGCGGCCATGAAGCGCCTTCTGCCTCGGGCCGTGGCTGAAGGTCAGAACCATCATACATGGCTGGCTGCAGACAGCGGCATGGTACCGCCCAGCCGGTTGCTTGAACACGGTGTCACGCTCACTCGGACTGTGCAAAAACCAGGCCAGTTCCTCATTGTAATGCCGCGAGCTTACACGTGCAATGTGTCCACTGGTTACGTTATATCCGAAAGTGTGTACTTTACACAGCCCGGTTGGCTCAACGGCGCCGAGAAGATTTTCCAGGACTTGCAAAAAAACTGTGAACCCGCTGCCTTTTCATTCGAAAAGCTACTTATAAACATGTCCACGGATTCACGTACACCTCAAAACATACTGAAACAGCTTCTAAACATGTTGAGCAACATGAGAGACTGTGAAGTGGCACTTCGGAGTCAGCTGGTTGAGGATTTAGGCTTAAAGACATCTGAACGTATTCGGCCCACAACGTCCAAATCAAACGAGCATAATGATGACTATGAGTGTGACGTGTGCCATTCAATTCTTTACATATCAATGGTGAACAACTCGCATGAAGACTGTGACTATTGTCTGAGACATGGCATTGAGATTTTATCAAAAAAACACAATCAACTCAAGTACTGCAAGTTTTTGTACACTTTTGACGAGAAGACGTCCACCAAAAGTTGA
Protein Sequence: MSSNGSDAKKRKLLNNEEAILESSTKKIKVQAQRKFAQNAVLPTSTAQKPIQTSVVPNNVTKPPIKRPNTEDFLTFLCFRGTSLLPPRLDFFNKPQRSLSAQEIAAGKKRRKSTPILPVTNANNPYNVNSVNNESIERKKISQLPQTKFPLSKLGHKVMGRKLVRSTSRYTVRQEALTLRQLALRHVPKIKKPMSKVIKPLVKENNKTKIEKNGKQVSLDGKQIQKLKGRITRSNSLPSIFCPAINQLRDDKGKWCKGSCSNKPSSKTSSDDSKDVEEERPSRKKTASNNLDHRSNSLGNMKRKTSIVKCKVENKNNRKTRSLASKHKNSDQDNYVVPDKKCDKNLKTVSKSNRANSLIETKLTVDVKRRTSSVDNMKTTHESKDIISSTRSRPPRRTKEAATLFMEMLRKDMRCPDEQEEDDSSSVESFPDLPNTRINGNISVDTSCXXXXXXXXXXXXXXXXXXPEQRERELKVFSKQNKIDKQLLEQQLCEKKDDKILPLVTDSKKTKFIDKKKVNKLKKKVDVKTLEKKKMKDVIETIKFTENSGTASFKRNLRPRRSSTMLDDYIIMTDSDEDDMKCEPVIEVTKCEAPKLSTKTTTMAGESKSQKCKLSTDESVKKNLKINKTDLKPKKDLNKDSEVKKSLSETKSKSILLKCDKELEIKNIKNTAVDKKNERSSKNKTEIVVITKEPKTTGIGSKNAGKKVPPSKQQSTKKENSSNKKTSNLDVYNNNNNNKKKRSTSSSSVTSSSSSMFSGITSQTKEELLERMAANFDAKHTASEGANKVKLTATAESNNGSAAKKLVESGVIEKNLQSGNIVEKKAASEVNSVNNELAKKKQVLEKISKTENLVTVPKEENSNVTAEKVENVVMVVDKVEKTESMLVPLNKVEKVENMVFQTIAKDLFLGQQKEIKITIPEYLSGKNFQLDNRFKQDDGLSVLSEICSALPRFNEPYVSSRQLLNKVPAPGDSSFVKYGPPTISGDEKSSVLTLAPPAFESRTVKIVNLARSSSSSEANDKNDLAASWRRAFKNVKLPKNGIVSSAVSVGNNLIAWTKKKQNDNQIPLPKTYTDGIDGGDNCDTKEIVSNSNSMKNTLQSSPVNGITEKKSEPSNKCQTTCFGELKTIEMMDCKKTVPASAPNNASYLAKTTILSSTKYDLKFEKRSSSAATATMAVPISLEKQQQIRKDVVGDVSSSDDQSPEKKIFHQRRLSTTQSCSGNSSDAFSPDNETSVYAFQPDLPIASTPFRRNKPQSPAKSRTVSPNTSIAVSIENDSMEEKSHQSTVSSTTTDVDSEEGRLFYIPLPAGVRAQPMIQGVTVKLGTEGPQKKLVMSAKLVTKPPASTIPVSSISPKPERKIKPLCTTKITNSTTPVGTVQPTTRTIQPPKCTPSTSKQVSPLLPQPQIPETKDDKKRLQQIXXXXXXXXXXXXXXXESKKSSSATNNKKQKKTEKQVNNKRKSSEKVASKKKLAKEHAHMLDAPTFYPSEEDFKDPLEYFEIIKPIAQKYGICRVPECKVSDDMRFTAYNQYVHKMMNRWGPNVREMMAMKKYLETQSIVLSNPPLIGGMELDLPKLYHTVQELGGLKEVIELDKWCRVADLMKIPKSAQDRVTKLDDIYCKYLLPYDTLSHDERQKLIAEVDKEWKQICKKGDTDDELYEDVNDCIAKGRSIALSAYYRVARNTVAMWFKEQQQQQQPSGGHSSSTSTAAATVIRAEDVESLYWKNVQDRKNHICVLSGSIDSGAEGYGFPTTKTATFTKHPWNLKVLTNNPESVLKSLGPVMGMTVPTIHMGMVFSACCWYKDPHGLPWIEYLHTGADKVWYGVPSSQSDLFRAAMKRLLPRAVAEGQNHHTWLAADSGMVPPSRLLEHGVTLTRTVQKPGQFLIVMPRAYTCNVSTGYVISESVYFTQPGWLNGAEKIFQDLQKNCEPAAFSFEKLLINMSTDSRTPQNILKQLLNMLSNMRDCEVALRSQLVEDLGLKTSERIRPTTSKSNEHNDDYECDVCHSILYISMVNNSHEDCDYCLRHGIEILSKKHNQLKYCKFLYTFDEKTSTKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00134026;
90% Identity: iTF_00018798;
80% Identity: -