Nlon005037.1
Basic Information
- Insect
- Nasonia longicornis
- Gene Symbol
- -
- Assembly
- GCA_000004795.1
- Location
- GL281021.1:19304-20933[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-11 1.4e-08 34.1 0.0 1 35 39 74 39 81 0.91
Sequence Information
- Coding Sequence
- ATGCAAGCGTCCATGGCCAAGCTGTTGGAGTCGTCCCACGCTTGGCTCGGAGCCTCCACCTCCAGTATAGCAGCTGACTACTCCAGCCTGCTGAAGCTGAAGGCGCCAACGTGGACGCGGCAAGAGCTGCAGGAGGCCATCGAGGCCGTGGTCATGCAGAAGATGCGCTTCACCCAAGCCTCGAGCAAATACGGCATACCCAAGGGCACGCTCTACGACAACATCCTCGGCAAGTCCAAGCGGATGATGGTACTCGAGGAGGCGGGCCTCAAGCCGTCCGAGGAGACGGCCGTTCTCGAGTTCTGCTGCGACATCAGCGTCAGTCCTTACAATCGCAGGACGAAAAAGTCCCTGCAAGCCATCCTCGGCTTCGTCGAGAAGCTCAGGCGGCAGCGAGAGCCCAACTTCGCGTTCACCGGACTCTCGGGCTTCCGCTGGTGGTGGGCCTTCTGCAAGAAGCACGGCATCGTCTCGCTCTACTTCAACGACGAGAACGACAACGACCACTCGTCGGCCTCCAACTGA
- Protein Sequence
- MQASMAKLLESSHAWLGASTSSIAADYSSLLKLKAPTWTRQELQEAIEAVVMQKMRFTQASSKYGIPKGTLYDNILGKSKRMMVLEEAGLKPSEETAVLEFCCDISVSPYNRRTKKSLQAILGFVEKLRRQREPNFAFTGLSGFRWWWAFCKKHGIVSLYFNDENDNDHSSASN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01219003;
- 90% Identity
- iTF_01190244;
- 80% Identity
- -