Mper007477.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Myzus persicae
Gene Symbol
TFIP11
Assembly
GCA_001856785.1
Location
NW:204910-209804[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.24 1.8e+03 -2.0 0.0 137 156 284 302 279 364 0.79
2 3 8.2e-77 6e-73 245.5 20.1 9 275 389 649 382 649 0.97
3 3 0.34 2.5e+03 -2.5 0.1 237 259 656 678 651 692 0.52

Sequence Information

Coding Sequence
ATGTCTGACGATGAAAtggaaaaatttgaaattactgATTTTGATTTGGACAATGAATTTAATATGAACAGACCCCAAAGACGACTAACCAAAAATCAAGCAATTTACGgaatTTGGGCTGATGAAGAAGGTAATGATAGTGACGATGAACCTTCAGGTTTTGGAGGCCGTAGAAACAAAGataagaaatataaacaaaactacACTGCGCCAGTTTCATTTGTGGCTGGAGGAGTTCAACAGGCTGGCAaagataaaaaagaaattaaaccCGAAGAAAAAAAAGGCATTGAGTCACACCATTTGGAAGATAATATCTCCGCATCTAGtgatgAAGAAAAACCAGcatttagttttgatattgaTCAAGAATTGGCAGGATTACGAAAGAAACGATCTCAAGTAAACTCAAGACTAATAAACAAAGGATTAGGAGATTGGGAAAAACATACAAAAGGAATTGGTGCAAAACTTTTGCTCggaATGGGTTACCAACCTGGTCATGGTTTAGGAAAAAAACTTCAAGGTATTCTGGCTCCAATTGAAGCAAATTTAAGAAAAGGAAGAGGAGcaattggtgcATATGGTCCTGAGTCTAAAACTAAACCAatgaaaatagataaaatagCAGAAAAATCAAAAGATAACAAAGTTCTCGTAAGTGGTTGGAGAAAAGCACTTAAAGCAGAAAaagttcaatataattataaaactgctGAGGAAGTCATTGAAGAAAGCAAACAACCAGGGCAAAGAAAACGAGAATTCAATGAACTAAGTAGAGTAAAAGTAATTGATATGACTGGTCCAGAACAAAGAATTTTATCTGGATATCATGCTATATCGGGTGTTAAAAAGCCAATAGACCAGTGGGAAATtcgaaaagataaaaaatactcaaattttGATCTACCTGAATTATTACACAATCTCAACCTATTAGTTGAAATAGCCGAACAAaaCATTATTACCAACAATCAAGAACTTTGTAATTCGGAGGATAGGCTTATTGTCATTGAAcaagaatctaaaaaattaggagaaaatataaatgaaaaaaataatgcaattgaATCTcttgaaaaaatgataataatcatgGAATCTATGAatgatgcattaaaaaaaaatatgttagataGTAGCCAAGCTATAAAACTTTGCACAGAAATGAAAGAAAATTACTACTCAGATTATCGGCTCAATGGTGGATCAGTTTTCGCTCTATCTATTTCTCAAATATTGATTAAAGAAATGCTTTCTACATGGGACCCATTACAAGATCCAACTATGCCTTTCAATGAACTCAATAAATGGAAagaattattaactttaaatgagCCATGTGCAGTTAATTTTCAAGCCAGTGatgaatttcaaacattaatttGGCAGGAATGGGTACCTCAAGTTCAAAAAGCATgcagacGATGGAAATGTCGAGATTGTCACAGTATGTTGAAACTTATCGAACAGTCAACTGAATTGATACCATCAAACATAATTAATCAAGTtcttgaaaatatgattttaccACAAATACAGCTGGAAGTGGAACAGTGGGATCCGTTGACTGATCTTGTACCAATCCATTTGTGGATTCACCCTTGGTTGCCATATTTAAGTGaacattttgaaacaattgtTTATCCTACATTGAGACAAAAATTAAGTGTAGCATTAAATGCTTGGCATCCATCTGACAACTCTGCTAAGTTGATGCTCCAACCATGGATAAAAGTGTTTCAGCAAGGCTACATGGAGGCTTttctaataaacaatattgttccTAAATTACAAGCTGCTCTACATACTTTTGTTATCAACCCACATCATCAACAATTGGacaattGGAATTGGGTAAATGCATGGTCAGATGTATTACCATTACCCACATTAGTGGAATTGTTAGACCAACACTTTTTTCCAAATTGGCTTAAAACGCTTACTATGTGGATAAATATGAATCCTAACCATGAACAAATAAGTAACTGGTATACAGGATGGAAGTCTTTAATGCCTGCTGTTATTGTAGAACATCCAACTATTAAAGGGAGGTTTCATTCTGCTTTAGACATAATGAGCCGAGCAGTTGGAGGACCATCTATGCCACAACCACCTCCACCACCTACTattcatggTGGTCTAGCTGAAGCTGTACGTACCGCATCACAAATGCCACATGGCTTTAAAGAATTAGTGCAAAAGCGTTGTGAGGAACGGGGTATTTTATGGATGCCTATTTCAGGTCGGTTTAGAGAAGCTAAACAAGTATATAGATGTGGAGCACGGCTTCAAGCATTTATTGACCGTGGGGTTTTATTTGTTTGCCAAGATGGAATAAATTTTTCTCCAATGTCTGTACAATCAATGTTAGAactatgtgaataa
Protein Sequence
MSDDEMEKFEITDFDLDNEFNMNRPQRRLTKNQAIYGIWADEEGNDSDDEPSGFGGRRNKDKKYKQNYTAPVSFVAGGVQQAGKDKKEIKPEEKKGIESHHLEDNISASSDEEKPAFSFDIDQELAGLRKKRSQVNSRLINKGLGDWEKHTKGIGAKLLLGMGYQPGHGLGKKLQGILAPIEANLRKGRGAIGAYGPESKTKPMKIDKIAEKSKDNKVLVSGWRKALKAEKVQYNYKTAEEVIEESKQPGQRKREFNELSRVKVIDMTGPEQRILSGYHAISGVKKPIDQWEIRKDKKYSNFDLPELLHNLNLLVEIAEQNIITNNQELCNSEDRLIVIEQESKKLGENINEKNNAIESLEKMIIIMESMNDALKKNMLDSSQAIKLCTEMKENYYSDYRLNGGSVFALSISQILIKEMLSTWDPLQDPTMPFNELNKWKELLTLNEPCAVNFQASDEFQTLIWQEWVPQVQKACRRWKCRDCHSMLKLIEQSTELIPSNIINQVLENMILPQIQLEVEQWDPLTDLVPIHLWIHPWLPYLSEHFETIVYPTLRQKLSVALNAWHPSDNSAKLMLQPWIKVFQQGYMEAFLINNIVPKLQAALHTFVINPHHQQLDNWNWVNAWSDVLPLPTLVELLDQHFFPNWLKTLTMWINMNPNHEQISNWYTGWKSLMPAVIVEHPTIKGRFHSALDIMSRAVGGPSMPQPPPPPTIHGGLAEAVRTASQMPHGFKELVQKRCEERGILWMPISGRFREAKQVYRCGARLQAFIDRGVLFVCQDGINFSPMSVQSMLELCE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01037788;
90% Identity
iTF_00184574;
80% Identity
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