Mper005533.1
Basic Information
- Insect
- Myzus persicae
- Gene Symbol
- JARID2
- Assembly
- GCA_001856785.1
- Location
- NW:387183-405452[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.1 3.9e+03 -2.0 0.1 49 75 500 525 485 528 0.67 2 4 0.39 7.2e+02 0.4 0.0 21 69 979 1027 970 1038 0.80 3 4 7e-21 1.3e-17 63.7 0.0 6 89 1538 1619 1534 1619 0.93 4 4 4.7 8.6e+03 -3.1 0.0 49 63 1633 1645 1629 1660 0.75
Sequence Information
- Coding Sequence
- ATGTCTTCTAATGGGTCGGATGCAAAGAAACGCAAACTGCTGAACAATGAAGAAGCTATTCTTGAATCAAGTACCAAAAAaatCAAGGTACAAGCTCAGCGTAAATTTGCCCAAAATGCTGTGATACCTACCAGTACTGCACAGAAACCTATTCCGACTTCAGTGGTGCCTAATAATGTGACTAAACCTCCAATTAAACGGCCAAATACTGAAGACTTTCTTACCTTCCTTTGTTTTAGAgGTACAAGTTTATTACCACCACGACTAGATTTCTTCAATAAACCTCAACGCTCTCTATCAGCACAAGAGATTGCTGCTGGAAAAaaaaGAAGAAAAAGCACTCCTATACTGCCAGTAACTAATACGAATAATccatatgtaaatattgtaaataaggAATCAATTGATCGAAAGAAAATTAGTCAGTTACCACAGACCAAGTTTCCACTGTCTAAGCTTGGACATAAAGTTATGGGTCGAAAGTTGGTAAGGTCCAGTTCAAGGTATACTGTTCGACAAGAAGCTCTCACATTACGTCAATTAGCCCTTCGTCatgttccaaaaataaaaaaatcaatgtcaAAAGTTATAAAACCTttagtaaaagaaaatataaaaaaaaaaactgagaaaAATGGAAAACAAGTGTCATTAGACGGTAAGCAAATACAAAAGTTGAAAGGCCGTATAACCCGATCAAATTCTTTACCAAGTATATTTTGTCCTGCGATAAATCAACTTAGAgATGACAAAGGGAAATGGTGTAAAGGGAGTTGTAGTAATAAACCTTCTTCAAAAACATCATCTGATGAATCAAAGGATATTGAAGAAGAAAGACCATCGAGAAAAAAGACTGCATCAAACAATTTAGATCATAGAAGTAATAGTCTGGGTAACATGAAACGAAAGACTAGTATTGTTAAATGTAAAGTGGCagataaaaataacagaaaaactAGAAGTTTAGCTAGTAAACATAAGAGCAGCGACCAAGATAATTATGTTGTTCCTGAAAAGAAGTGTGATAAAAATTTGAAGACTGTATCTAAGAGTAACAGAGCAAACAgtttaattgaaacaaaattaacagTTGATGTGAAAAGAAGAACATCTTCAGTTGATAACATGAAAACCACACGTGAGAGTAAAGATTTAATTAGttcaACCCGTTCAAGGCCACCCAGAAGAACTAAAGAAGCTGCTACTTTATTCATGGAAATGTTACGAAAAGATATGCGGTGCCCTGATGAGCAAGAAGAAGACGATACATCATCCGTTGAGAGTTTCCCTGAGCTTCCTAATACACGAATAAACGaacaACGTGAACGTGAATTAAAAGTGTTCTCAAagcaaaacaaaattgaaaaacaacaaGTAGAACAAAAGTTATGTGAAAAAAAGGATGATAAACCATTGTCACTGGGAACTGATGGTAAAAAGACAAAATTAATTGACAAAAAGGttaataagttgaaaaaaaaggttgagGTGAAAACTCTGGAAAAGAAAAAGATGAAAGAAGTTATAGAGACGATTAACTTTAATGAAAGTAGTGGAACAACATCGTTTAAAAGGAATCTGAGGCCTCGACGTTCCTCTACCATGTTGGATGATTATATCATGACTGATTCTGATGAAGACGATTTGAAAAGTGAACCCGTTATAGAGGTGACAAAATGTGAAGCTCCTAAACCGTCGACCAAAACGACAACTGTGGCAGGGGaatcaaaatctcaaaaatctAAGTTAAGTACTGACgaatctgttaaaaaaaatcttaaaatcaataAGACTGACTTGAAACCGAAAAAAGATTTGAATAAAGATTCTGAAGTGAAAAAAAGTCTTTCTGAAACTAAgtcaaaaagtatattattaaaacgtgacAAAGAGCTAGaaatcaagaatttaaaaaatactgctgtagataaaaaaaatgaaagatcGTCAAAAAATAAGACTGAAATCGTAGTAATTACTAAAGAACCAAAAACTGCCGGCATTGGTTCAAAAAACGCCGGAAAAAAAGTGCCACCCCTTAAGCAGCAGTCGACAAAAAAGGAAAATGTCTCAATCAAGAAAAAATCcaatttagatttatataataataataacaacaataaaaaaaaacgatctaCATCATCGTCGTCAGTTACGTCTTCGACGTCTTCCATGTTCAGCGCTATTACTAGTCAATCAAAAGAAGAGCTTTTGGAACGCATGGCTGCGAATTTTGATGCCAAACCTACCGATTGTGAGGGTGCCGAGAAATCTGCTGCCGATGATGCGACGTCGACAACAACAGTGGAAAGCAACAACTGCATAgctgtgaaaaaaaatacacaaagcAACGTGAAGGAAAAACATGTGGAAAGCCGcttgattgaaaaaaatgtacagaacAGTAGTATTGTGGTGGAAAAAAAGGCAGCCGTCGAAGTTCAATCAGTTAATAACGAATTGGTGAAGAGCAAACAAGATTTGGATACAGTTTCAAAAACGGAGAACGTAGTTGCAGTGCCAAAAGAAGAAAACGTCATTGAGACCACTGAAAAAGTAGAAAATGTGGTCATGGTTGTCGAGAAGGTAGAGAAAAGCGAGTCTATGGTAGTGCCATTGAACAAAGTGGAAAAAGTAGAAAACATGGTGTTCCAGACAATAGCGAAAGACCTTTTCTTGGGACAGCAGAAAGAGATCAAGATCACCATACCCGAATACTTCTCCGGTAAAAACTTCCAATTGGACAACAGGTTTAAACAAGATGATGGGCTTTCCGTATTGTCCGAGATTTGTAGCGCCCTGCCTAGGTTTAATGAACCGTATGTGTCCAGTAAACAGCTGTTAAACTGCAAGATGCCGGCGCCTGAGGATAGCAGTTTCGTGAAGTACGTTCCGCCAGCGATCAGTGGTGATGAAAAGCCTCTGGTGCCGACGGTCACGCCGCCGTCGTTTGATAGTAGGTGTGTCAAAATTGTTAACTTGGCTCGTGGCAACGTCTCGTCAGGGACAaaccaaaaaaatgatttggcAGCGTCTTGGCGACGGGCTTTCAAAAACGTCAAATTACCAAAAAATGGAACCGTCTCATCCGCTGTTTCGGTCGGTAACAACTTGATTGGTTGGACTAAAAAGAAGCAAAACGACCATCAAACACCGCTACCAAAGACATACGCCGATGGTATTGATGGCGCCGGTGATAATGGTGGTCCCAAAGAAACAGTTTCCAATAGTAATTCGATGATGAACACTTTTCAATCATCACTGGTGAATGGTATCACTGAAAAGAAATCTGAACCTTCATATACATGCCAAAAAACTTGCTGTGGCGAATCGAAAACCGTCGAAATGGACTGCAAAAAGACTGTGCCTGCATCGGCAACCAACAACGCGTCTTATTTGGCCAAAACGACGATATTGAACAGTACAAAGTAtgatttaaagtttgaaaaacgTTCCTCGTCGGCTGCAGCATCAACGACTACGGCAGCTCCCATCACCCTAGAAAAACAACAAGTACGCAAAGACGTGGTGGGTGACGTGTCATCTTCGGACGATCAGAGTCCGGAGAAGAAGATATTCCACCAGCGGCGACTGTCTACCACTCAGTCTTGTAGCGGAAACAGTTCCGATGCCTTCTCACCTGATAACGAGACGAGTGTTTACGCTTTCCAACCTGATTTGCCGATAGCCAGTACCCCATTCCGTCGGAACAAACCCCAATCGCCCGCTAAGTCCAGGACGGTTTCGCCCAACACTTCAATCGCTGTGAGTATTGAAAACGATTCTATGGAAGAAAAATCTCACCAGTCCACCGTGTCATCGACAACAACAGATGTTGATAGTGAGGAAGGACGACTTTTTTATATCCCGTTACCAGCCGGGGTTCGGGCACAGCCGATGATCCAGGGCGTCACAGTCAAGCTTGGCACGGAAGGCCCGCAGAAGAAATTAGTGATGAGCGCTAAGTTGGTAACCAAACCCCCAGCATCTACAATACCAGTCAGTTCCATATCGCCAAAACCCGAGCGGAAAATCAAACCGCTGTGCACGACAAAAATAACCAACAGCACCACTCCCGTTGGCACTGTGCAACCAACTACTAGAACTATTCAGCCCCCAAAGTGTACCCCCTCGACTTCAAAACAAGTGTTACCATTACCGTCACAGTCACAAATCCTGGAAACAAAATACGATAAGAGACGGTTACATCAAATCACCACAACTACTAATTCTACTTCTACTGCCATTACTTCTGCTAAGGAATCTAAAAAATTGTCATCTGTTGCTAACAAcaagaaacaaaaaaaGACTGAAAAACAAGTTAACAATAAAAGGAAGTCCAGTGAGAAAGTTGCTTCAAAAAAGAAATTAGCAAAAGAACATGCTCACATGTTGGACGCCCCGACGTTTTACCCGTCTGAAGAAGATTTCAAGGATCCTTTAGAATATTTCGAAATTGTTAAACCAATTGCTCAAAAGTATGGTATATGCAGAGTCGTACCGCCTCCCAGTTTCAagCCGGAATGTAAAGTCAGCGACGACATGCGTTTCACTGCATACAACCAGTATGTGCACAAAATGATGAACCGTTGGGGCCCTAATGTCCGCGAAATGATGGCTATGAAGAAGTACCTAGAAACACAGTCGATAGTATTTTCCAATCCACCGCTCATTGGTGGCATGGAACTGGACTTACCCAAGCTGTATCATACAGTACAGGAGCTCGGTGGACTCAAGGAAGTGATAGAGCTGGACAAGTGGTGTCGTGTTGCTGATCTGATGAAGATTCCAAAGAGTGCTCAAGACCGTGTAACTAAACTCGACGACATATACTGCAAATATCTATTGCCATACGACACACTCTCGCACGATGAACGGCAAAAGTTGATCGCTGAAGTGGACAAAGAGTGGAAACAGATCTGTAAAAAAGGTGACACTGATGACGAGCTGTATGAAGACGTCAATGACTGTATAGCTAAGGGTCGAAGTATCGCGTTGAGCGCCTATTACCGGGTAGCACGCAACACCTTTGCCATGTGGTTCAAGGAACAGCAACAACCGTCAGGCGGACACTCATCGTCGACGTCAACTGCAGCAGCAGCGGTGGTCCGGGCTGAAGACGTCGAATCACTCTACTGGAAAAACGTGCAGGACAGGAAGAATCACATATGCGTATTGTCCGGTTCAATCGATTCAGGAGCCGAGGGTTATGGGTTCCCAACAACAAAGACGGCCACATTCACCAAACATCCATGGAACCTGAAGGTACTTACTAACAATCCGGCGTCTGTGCTCAAGTCACTGGGCCCAGTGATGGGCATGACTGTGCCTACTATACATATGGGCATGGTATTTTCGGCGTGCTGTTGGTACAAGGACCCGCATGGGTTGCCTTGGATTGAGTACCTGCATACCGGCGCTGACAAGGTGTGGTATGGAGTGCCATCCTGTCAGAGCGACCGGTTCCGAGCAGCCATGAAGCGCCTGCTGCCCCGGGCCGTGGCTGAAGGTCAAAATCATCACACCTGGTTGGCTGCAGACAGCGGCATGGTGCCTCCCACTCGGTTGCTTGAACACGGTGTCACGCTCACCCGAACCGTGCAGAAACCAGGCCAGTTCCTCATCGTCATGCCGCGCGCTTACACATGCAACGTGTCTACCGGTTACGTGATATCTGAGAGTGTATACTTCACACAGCCCGGCTGGCTCGATGGTGCTGAGAAGATTTtccagGACCTGCAAAAAAACTGTGAACCTGCCGCCTTTTCGTTTGAAAAACTACTAATTAACATGTCCACAGATTTGCGTACACCTCAAAACATACTGAAACAGCTTCTAAACATGTTGAGCAACATGAGAGACTGTGAAGTTGCGCTCCGGAGTCAGCTGGTGGAGGATTTAGGCCTAAAGGCGTCCGAACGTATTCGGCCCTCAACGTCCAAATCAAACGAGAATAATGATGACTATGAGTGTGACGTGTGCCATTCAATTCTTTACATATCAATGGTGAACAATTCGCATGAAGACTGTGACTATTGTCTGAGACATGGCAttgaaattttatcaaaaaaacacAATCAACTCAAGTATTGCAAGTTTTTGTACACTTTTGATGAGaCTGATTTGGATACGATATTAGTAAAACTTCGTGAAAGGattgattcaaaaaaaaaaaagacatctaCCAAAAGTTGA
- Protein Sequence
- MSSNGSDAKKRKLLNNEEAILESSTKKIKVQAQRKFAQNAVIPTSTAQKPIPTSVVPNNVTKPPIKRPNTEDFLTFLCFRGTSLLPPRLDFFNKPQRSLSAQEIAAGKKRRKSTPILPVTNTNNPYVNIVNKESIDRKKISQLPQTKFPLSKLGHKVMGRKLVRSSSRYTVRQEALTLRQLALRHVPKIKKSMSKVIKPLVKENIKKKTEKNGKQVSLDGKQIQKLKGRITRSNSLPSIFCPAINQLRDDKGKWCKGSCSNKPSSKTSSDESKDIEEERPSRKKTASNNLDHRSNSLGNMKRKTSIVKCKVADKNNRKTRSLASKHKSSDQDNYVVPEKKCDKNLKTVSKSNRANSLIETKLTVDVKRRTSSVDNMKTTRESKDLISSTRSRPPRRTKEAATLFMEMLRKDMRCPDEQEEDDTSSVESFPELPNTRINEQRERELKVFSKQNKIEKQQVEQKLCEKKDDKPLSLGTDGKKTKLIDKKVNKLKKKVEVKTLEKKKMKEVIETINFNESSGTTSFKRNLRPRRSSTMLDDYIMTDSDEDDLKSEPVIEVTKCEAPKPSTKTTTVAGESKSQKSKLSTDESVKKNLKINKTDLKPKKDLNKDSEVKKSLSETKSKSILLKRDKELEIKNLKNTAVDKKNERSSKNKTEIVVITKEPKTAGIGSKNAGKKVPPLKQQSTKKENVSIKKKSNLDLYNNNNNNKKKRSTSSSSVTSSTSSMFSAITSQSKEELLERMAANFDAKPTDCEGAEKSAADDATSTTTVESNNCIAVKKNTQSNVKEKHVESRLIEKNVQNSSIVVEKKAAVEVQSVNNELVKSKQDLDTVSKTENVVAVPKEENVIETTEKVENVVMVVEKVEKSESMVVPLNKVEKVENMVFQTIAKDLFLGQQKEIKITIPEYFSGKNFQLDNRFKQDDGLSVLSEICSALPRFNEPYVSSKQLLNCKMPAPEDSSFVKYVPPAISGDEKPLVPTVTPPSFDSRCVKIVNLARGNVSSGTNQKNDLAASWRRAFKNVKLPKNGTVSSAVSVGNNLIGWTKKKQNDHQTPLPKTYADGIDGAGDNGGPKETVSNSNSMMNTFQSSLVNGITEKKSEPSYTCQKTCCGESKTVEMDCKKTVPASATNNASYLAKTTILNSTKYDLKFEKRSSSAAASTTTAAPITLEKQQVRKDVVGDVSSSDDQSPEKKIFHQRRLSTTQSCSGNSSDAFSPDNETSVYAFQPDLPIASTPFRRNKPQSPAKSRTVSPNTSIAVSIENDSMEEKSHQSTVSSTTTDVDSEEGRLFYIPLPAGVRAQPMIQGVTVKLGTEGPQKKLVMSAKLVTKPPASTIPVSSISPKPERKIKPLCTTKITNSTTPVGTVQPTTRTIQPPKCTPSTSKQVLPLPSQSQILETKYDKRRLHQITTTTNSTSTAITSAKESKKLSSVANNKKQKKTEKQVNNKRKSSEKVASKKKLAKEHAHMLDAPTFYPSEEDFKDPLEYFEIVKPIAQKYGICRVVPPPSFKPECKVSDDMRFTAYNQYVHKMMNRWGPNVREMMAMKKYLETQSIVFSNPPLIGGMELDLPKLYHTVQELGGLKEVIELDKWCRVADLMKIPKSAQDRVTKLDDIYCKYLLPYDTLSHDERQKLIAEVDKEWKQICKKGDTDDELYEDVNDCIAKGRSIALSAYYRVARNTFAMWFKEQQQPSGGHSSSTSTAAAAVVRAEDVESLYWKNVQDRKNHICVLSGSIDSGAEGYGFPTTKTATFTKHPWNLKVLTNNPASVLKSLGPVMGMTVPTIHMGMVFSACCWYKDPHGLPWIEYLHTGADKVWYGVPSCQSDRFRAAMKRLLPRAVAEGQNHHTWLAADSGMVPPTRLLEHGVTLTRTVQKPGQFLIVMPRAYTCNVSTGYVISESVYFTQPGWLDGAEKIFQDLQKNCEPAAFSFEKLLINMSTDLRTPQNILKQLLNMLSNMRDCEVALRSQLVEDLGLKASERIRPSTSKSNENNDDYECDVCHSILYISMVNNSHEDCDYCLRHGIEILSKKHNQLKYCKFLYTFDETDLDTILVKLRERIDSKKKKTSTKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00134026;
- 90% Identity
- iTF_00018798;
- 80% Identity
- -