Mcer004956.1
Basic Information
- Insect
- Myzus cerasi
- Gene Symbol
- TFIP11_1
- Assembly
- None
- Location
- Mc3940:14149-19616[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.21 2.9e+03 -1.8 0.0 137 157 284 303 279 379 0.75 2 3 1e-77 1.4e-73 248.5 20.6 9 275 389 649 382 649 0.97 3 3 0.34 4.7e+03 -2.5 0.1 237 259 656 678 651 692 0.52
Sequence Information
- Coding Sequence
- ATGTCTGACGATGAAATGGAAAAATTTGAAATTACTGATTTTGATTTGGACAATGAATTTAATATGAACAGACCCCAAAGACGACTAACCAAAAATCAAGCCATTTACGGAATTTGGGCTGATGAAGAAGGTAATGATAGTGACGATGAACCTTCAGGTTTTGGAGGCCGTAGAAACAAAGATAAGAAATATAAACAAAACTACACTGCTCCAGTTTCATTTGTGGCTGGAGGAGTTCAACAGGCTGGCAAAGATAAAAAAGAAATTAAACCTGAAGAAAAAAAAGGCTTTGAGTCACACCATTTAGAAGATAATATTTCTGCATCTAGTGATGAAGAAAAACCAGCATTTAGTTTTGATATTGATCAAGAATTGGCAGGATTACGAAAGAAACGATCTCAAGTAAACTCAAGCCTAATAAACAAAGGATTAGGAGATTGGGAAAAACATACAAAAGGAATTGGTGCAAAACTTTTGCTTGGAATGGGTTACCAACCAGGTCATGGTTTAGGAAAAAAACTTCAAGGTATTCTGGCTCCAATTGAAGCAAATTTAAGAAAAGGAAGAGGAGCAATTGGTGCATATGGTCCTGAGTCTAAAACTAAACCAATGAAAGTAGATAAAATAGCAGAAAAATCAAAAGATAACAAAGTTCTTGTAAGTGGTTGGAGAAAAGCACTTAAAGCTGAAAAACTTCAATATAATTATAAAACTGCTGAGGAAGTAATTGAAGAAAGCAAACAACCAGGGCAGAGAAAACGAGAATTCAATGAACTAAGTAGAGTAAAAGTAATTGATATGACTGGTCCAGAACAAAGAATTTTATCTGGATATCATGCTATATCGGGTGTTAAAAAGCCAATAGATCAGTGGGAAATTCGAAAAGATAAAAAATACTCAAATTTTGATCTACCTGAATTATTACACAATCTGAACCTATTAGTTGAAATAGCCGAACAAAACATTATTACCAACAATCAAGAACTTTGTAATTCGGAGGATAGGCTTATTGTCATTGAACAAGAATCTAAAAAATTAGGAGAAAATATAAATGAAAAAAATAATGCAATTGAATCTCTCGAAAAAATGATAACTATCATGGAATCTATGAATGATGCATTAAAAAAAAATATGTTAGATAGTAGCCAAGCTATAAAACTTTGCACAGAAATGAAAGAAAATTACTACTCAGATTATCGGCTAAATGGTGGATCAGTTTTCGCTCTATCAATTTCTCAAATATTGATTAAAGAAATGCTTTCTACCTGGGACCCGTTACAAGATCCAACTATGCCTTTTAATGAACTCAATAAATGGAAAGAATTATTAACTTTAAATGAGCCATCTGCTGTTAATTTTCAATCAAGTGATGAATTTCAAACATTAATTTGGCAAGAATGGGTACCTCAAGTTCAAAAAGCATGCAGACGATGGAAATGTCGAGATTGTAACAGTATGTTGAAACTTATTGAACAGTCAACTAAATTGATACCATCTAACATAATTAATCAAGTTCTTGAAAATATGATTTTACCACAAATACAGTTGGAAGTGGAACAATGGGATCCGTTAACTGATCTTGTACCAATCCATTTGTGGATTCACCCTTGGTTGCCATATTTAAGTGAACATTTTGAAACAATTGTTTATCCTACATTGAGACAAAAATTAAGTGTAGCATTAAATGCCTGGCATCCATCTGACAACTCTGCTAAGTTGATGCTCCAACCATGGATAAAAGTGTTTCAGCAAGGCTACATGGAAGCTTTTCTAATAAACAATATTGTTCCTAAATTACAAGCTGCTCTACATACTTTTGTTATCAACCCACATCATCAACAATTGGACAATTGGAATTGGGTAAATGCATGGTCAGATGTGTTACCATTACCCACATTAGTGGATTTGTTAGACCAACACTTTTTTCCGAATTGGCTTAAAACACTTACTATGTGGATAAATATGAATCCCAACCATGAACAAATAAGTAACTGGTATACAGGATGGAAGTCTTTAATGCCTGCTGTTATTGTTGAACATCCAACTATTAAAGGGAGGTTTCATTCTGCTTTAGACATAATGAGCCGAGCAGTTGGAGGACCTTCTATGCCACAACCACCTCCACCACCTACAATTCATGGTGGTCTAGCTGAAGCTGTACGTACTGCATCACAGATGCCACACGGTTTTAAAGAATTAGTGCAAAAGCGTTGTGAGGAACGGGGTATTTTATGGATGCCTATTTCGGGTCGGTTTAGAGAAGCTAAACAAGTATATAGATGTGGAGCAAGGCTTCAAGCATTTATTGACCGTGGGGTTTTATTTGTTTCCCAAGATGGAATAAATTTTTCTCCAATGTCTGTACAATCCATGTTAGAACTGTGCGAATAA
- Protein Sequence
- MSDDEMEKFEITDFDLDNEFNMNRPQRRLTKNQAIYGIWADEEGNDSDDEPSGFGGRRNKDKKYKQNYTAPVSFVAGGVQQAGKDKKEIKPEEKKGFESHHLEDNISASSDEEKPAFSFDIDQELAGLRKKRSQVNSSLINKGLGDWEKHTKGIGAKLLLGMGYQPGHGLGKKLQGILAPIEANLRKGRGAIGAYGPESKTKPMKVDKIAEKSKDNKVLVSGWRKALKAEKLQYNYKTAEEVIEESKQPGQRKREFNELSRVKVIDMTGPEQRILSGYHAISGVKKPIDQWEIRKDKKYSNFDLPELLHNLNLLVEIAEQNIITNNQELCNSEDRLIVIEQESKKLGENINEKNNAIESLEKMITIMESMNDALKKNMLDSSQAIKLCTEMKENYYSDYRLNGGSVFALSISQILIKEMLSTWDPLQDPTMPFNELNKWKELLTLNEPSAVNFQSSDEFQTLIWQEWVPQVQKACRRWKCRDCNSMLKLIEQSTKLIPSNIINQVLENMILPQIQLEVEQWDPLTDLVPIHLWIHPWLPYLSEHFETIVYPTLRQKLSVALNAWHPSDNSAKLMLQPWIKVFQQGYMEAFLINNIVPKLQAALHTFVINPHHQQLDNWNWVNAWSDVLPLPTLVDLLDQHFFPNWLKTLTMWINMNPNHEQISNWYTGWKSLMPAVIVEHPTIKGRFHSALDIMSRAVGGPSMPQPPPPPTIHGGLAEAVRTASQMPHGFKELVQKRCEERGILWMPISGRFREAKQVYRCGARLQAFIDRGVLFVSQDGINFSPMSVQSMLELCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01037788;
- 90% Identity
- iTF_00184574;
- 80% Identity
- -