Basic Information

Insect: Mythimna pallens
Gene Symbol: ZNF296
Assembly: GCA_961205895.1
Location: OY540854.1:11917979-11929816[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.9 2e+02 3.7 0.2 3 23 123 143 121 143 0.93

2 15 0.0021 0.21 13.1 2.8 1 23 308 330 308 330 0.99

3 15 3.2e-05 0.0032 18.8 0.4 1 23 336 359 336 359 0.97

4 15 0.0068 0.69 11.4 1.8 1 23 364 387 364 387 0.94

5 15 0.00026 0.027 15.9 1.5 2 23 567 588 566 588 0.97

6 15 0.00019 0.02 16.3 3.3 1 23 594 616 594 616 0.98

7 15 1.2 1.2e+02 4.4 5.1 1 23 685 707 678 707 0.97

8 15 0.077 7.9 8.1 0.3 2 23 715 736 714 736 0.97

9 15 0.019 1.9 10.0 1.9 1 23 742 764 742 764 0.96

10 15 0.002 0.21 13.1 1.7 1 23 770 792 770 792 0.98

11 15 0.0018 0.18 13.3 5.0 1 23 801 823 801 823 0.99

12 15 0.0059 0.6 11.6 2.1 2 23 869 890 869 890 0.97

13 15 0.014 1.4 10.5 3.8 1 23 907 929 907 929 0.96

14 15 1.8e-06 0.00018 22.7 0.7 1 23 935 957 935 957 0.98

15 15 1.9e-07 1.9e-05 25.8 3.1 1 23 963 986 963 986 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.9	2e+02	3.7	0.2	3	23	123	143	121	143	0.93
2	15	0.0021	0.21	13.1	2.8	1	23	308	330	308	330	0.99
3	15	3.2e-05	0.0032	18.8	0.4	1	23	336	359	336	359	0.97
4	15	0.0068	0.69	11.4	1.8	1	23	364	387	364	387	0.94
5	15	0.00026	0.027	15.9	1.5	2	23	567	588	566	588	0.97
6	15	0.00019	0.02	16.3	3.3	1	23	594	616	594	616	0.98
7	15	1.2	1.2e+02	4.4	5.1	1	23	685	707	678	707	0.97
8	15	0.077	7.9	8.1	0.3	2	23	715	736	714	736	0.97
9	15	0.019	1.9	10.0	1.9	1	23	742	764	742	764	0.96
10	15	0.002	0.21	13.1	1.7	1	23	770	792	770	792	0.98
11	15	0.0018	0.18	13.3	5.0	1	23	801	823	801	823	0.99
12	15	0.0059	0.6	11.6	2.1	2	23	869	890	869	890	0.97
13	15	0.014	1.4	10.5	3.8	1	23	907	929	907	929	0.96
14	15	1.8e-06	0.00018	22.7	0.7	1	23	935	957	935	957	0.98
15	15	1.9e-07	1.9e-05	25.8	3.1	1	23	963	986	963	986	0.98

Sequence Information

Coding Sequence: ATGAACCACTCAGCCGCAATGCCAGGGAACGTGGACGTAGATCCGCTGAGCTCGTACGAGTACCCTGCTTACGACAGCTACGCGGCTCAGACCTACCCGTACGCCAGCAAGTTGCAGCAATCCATCTACCAGGCGTACCAGCAGACTCAACCCAACTACATCAACGCTCAACCACAGGAACCATACAACAATTTACAACCACCGTTACAAACTCAACAACCTGTAGAACCTGAAATTGCTCCTAAAACTGAGACACAGGAAGCAGAATcaaaaccagttttaaaaaggcgaagaaaggaaaaaaaagggcAGAAAAGTACTTATTGTTCTGAAAAAATCAGAGACGCATCATTCAAATTCTATGGCTGTTCTGTCTGTAACGTCAGTTACAATGCTTTACATGAACTAGACCAACATGTGACCGCACACAAGAACAGAATGACGAGCTACAGGCTGCGGTTaagaaatcaaatcaaaaagaaacagataaaaaaagaaaagaaaaagttaaaaaagatgGTGAAGATTAAGAAAGAAATTGACATAGAAATTAAACCGGAAGACGGTTATATAGGAGAAGAGAAAGCCACAGATTTTATGAGCAATGGAATTAATCCTAATATGGAACTTAATGGGAGTGTCAATAATGGAATGATTCCTAATACTGAATGTAATGGAATAAATCCTATATTAGATTGTAATAGTGGACTTGTAATAAATAGTGAAAATAGTGCGGTAGAGGCGCAGAATAGTCAAAATCAAACTGATAATGACTTAAATTCTATAAGCAATGATCCTCAGGGTAATGAAACTAGTTCCTTGACCAATGATAGCAGTGAAGTAGAGAATGCAAGTACTATGAACAGTAAAGATAAAGAGAATAGCTTGGATGAGGCAGAGCTGACTAATTTAGAGAAAATTTACAAATGTTTTGCGTGCCAGAAACAGTTCACGTTGAGCTATTATTTGAAACTGCACGTGAGATCACATACAGACGAGAAGCCGTACACGTGCAGCGTGTGCGGGCAGTCGTTCATCACGGCCAGCAAGCTCGGGCGCCACAACAAGCGCATCCACCTCGCCGAGCGCTACCAGTGCCGCATCTGCTTCAAGATATACTCCAGGTTCGAGTTGCTGACGGTTCACTTTGACAAGACACACCCTGAAGACAAGTTGGACGGAGAACCTTATGACTACAACGCAATCCTACCATACCTCAAAGAGCTAGAAGAGCAGCTGCGCGCGCCAGAGCAGGGCAGCACTACCGAGCCGGAGTGCAAGCTCGAGCAGGACAGCAAGCCCAAGGCTGAGGAGCTGTTCTGGGAGGCGGAGGTGGGGCCGCAACAGCTCACCAGAGGTGCGCCGCCTCTGGTGGAGGTGCCGACGGATGTAAAGGAAGAGACATTTGATGAGGACCAGAAAGACTTAGTGCCGAAGCTGGACATCCTCATTGAAGAAGTGAAGGTGGACTTCGACGTGTCGATCAAGCGCGAATTGACCGACGACGAGGCCGTTGCGGATATAGCGGATGACGGTGATGACGGGGTGGCCGATGGGGATGACGGAGGCCAAGTCAAGGATGAGGACAGCCAATCCGACGAGGACTACTTCCCTTCGAACACGTGGACGGCCCCCCGCGCGCCGTCGCCGTCGCTGCCGTCCCCCGTGGGGCCCccgcggcggcgcggcggcgccctCACGTGCGAGGTGTGCCACAAGCGCATCAGCAGCGCGTCGTACATGCGCGTGCACCTGCGCACGCACTCGGGCGAGAAGCCCTTCAAGTGCCGCACGTGCGGCCGCGGCTTCATCACCAGCAGCAAGATGCACCGCCACGTGCTCACGCATGCGCAGGTTGCAGACAAAGATGAAGTGAAGACGGAGGGAGAGGACACGAAGCCGGACGTGGACACTGACGCTGCGGAGCTACCGATAGAAGATGGCCCTAAGAAACCAGCGAAGAAGAAATCGAAAATGAAGTCTAAGTCGTCGAAATCGGGTCAGCTAAAGTCGCGTGAAGAGAAGCCTCGTCGCAAGCACCAGAAGAGGCCGCACGCCTGCGAGTACTGCAACCAGAAATTCCTGCACTTGAATATGCTGGAGGTGCACAAGCAGTCGCACTCGGGCGAGGCGCTGGTGCTGCGTTGCCACTACTGCCTGCAGGACGCGCCCGACCAGCAGGCGCTGCAGGAGCACCAGGCCACGCACCAGGGTCCTAAGCCCTACCTCTGCACCGTCTGCGGGAACACCTACAAGAAGAGGGAGACCATGATCTACCACCGCAAGCGGCACTTGCCTGACAAGGAGTTCGTGTGTGACATCTGCTCGAAGCGCTTCAACGCGGCCTGCAAGCTCAGCAAGCACCTGGTGACGCACCGCGCCGACAAGTTCGTGCTGCGCTACGAGTGCCCCGTGTGCGCGCACATGTTCAACACGCAGTACCACGTGCACATGCATCTGCGCACGCACCAGAAGGAAGGCCTGATCCTAGAAGAAAACCGCAGCGAGATTTTAGCGATGGTCCTCCAAAACGCGCGCAAGATCCCCAAACAAGCGTCGTCCCCTCTGTCCCTCACCACGGTGCCGGCAGACGAGCGCTCCCGCGTGTGCAACATATGCGGGGAACTGTTCCACCACTTCTATTACTTAGAGGAGCACCTCAAGAGCCACGCGTCCACCATAGCCATCACAGACGTAGATAAAGAAGACGAGAAGAAATACATATGTCAAGTTTGTAACAAAGGTTTCAAACTACATTATTATCTTAAACTCCACAGTTTCACCCACTCGAAGGAGAAACCCTTCATCTGCCAGCAATGCGGGAAAGGCTTCATCACTAAAGGCAAGCTAAAACGCCATTTGGAAACTCACACAGGCTTGAAGAAATACCAATGTCATATCTGCTACAAATTCTTCACGAGGCCGAGTTACCTGCGGATACACATCCGCACGATACATGGCACTCAGGATTATAATTTTAGGTTTGACAAGGGCTATGGCGTCGGTTCTATAGCTATGTCTGCTATGACAATGTCAGATGTCAGTCAGAACAGTATATGA
Protein Sequence: MNHSAAMPGNVDVDPLSSYEYPAYDSYAAQTYPYASKLQQSIYQAYQQTQPNYINAQPQEPYNNLQPPLQTQQPVEPEIAPKTETQEAESKPVLKRRRKEKKGQKSTYCSEKIRDASFKFYGCSVCNVSYNALHELDQHVTAHKNRMTSYRLRLRNQIKKKQIKKEKKKLKKMVKIKKEIDIEIKPEDGYIGEEKATDFMSNGINPNMELNGSVNNGMIPNTECNGINPILDCNSGLVINSENSAVEAQNSQNQTDNDLNSISNDPQGNETSSLTNDSSEVENASTMNSKDKENSLDEAELTNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCSVCGQSFITASKLGRHNKRIHLAERYQCRICFKIYSRFELLTVHFDKTHPEDKLDGEPYDYNAILPYLKELEEQLRAPEQGSTTEPECKLEQDSKPKAEELFWEAEVGPQQLTRGAPPLVEVPTDVKEETFDEDQKDLVPKLDILIEEVKVDFDVSIKRELTDDEAVADIADDGDDGVADGDDGGQVKDEDSQSDEDYFPSNTWTAPRAPSPSLPSPVGPPRRRGGALTCEVCHKRISSASYMRVHLRTHSGEKPFKCRTCGRGFITSSKMHRHVLTHAQVADKDEVKTEGEDTKPDVDTDAAELPIEDGPKKPAKKKSKMKSKSSKSGQLKSREEKPRRKHQKRPHACEYCNQKFLHLNMLEVHKQSHSGEALVLRCHYCLQDAPDQQALQEHQATHQGPKPYLCTVCGNTYKKRETMIYHRKRHLPDKEFVCDICSKRFNAACKLSKHLVTHRADKFVLRYECPVCAHMFNTQYHVHMHLRTHQKEGLILEENRSEILAMVLQNARKIPKQASSPLSLTTVPADERSRVCNICGELFHHFYYLEEHLKSHASTIAITDVDKEDEKKYICQVCNKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHIRTIHGTQDYNFRFDKGYGVGSIAMSAMTMSDVSQNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00952075;
90% Identity: iTF_01027585; iTF_01031349;
80% Identity: -