Basic Information

Insect: Mythimna vitellina
Gene Symbol: ZNF296
Assembly: GCA_949316375.1
Location: OX438713.1:405078-418200[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.8 1.7e+02 3.7 0.2 3 23 124 144 122 144 0.93

2 15 0.002 0.18 13.1 2.8 1 23 309 331 309 331 0.99

3 15 3e-05 0.0028 18.8 0.4 1 23 337 360 337 360 0.97

4 15 0.0039 0.35 12.1 1.6 1 23 365 388 365 388 0.94

5 15 0.00025 0.023 15.9 1.5 2 23 565 586 564 586 0.97

6 15 0.00015 0.013 16.6 3.2 1 23 592 614 592 614 0.98

7 15 1.1 1e+02 4.4 5.1 1 23 683 705 676 705 0.97

8 15 0.074 6.7 8.1 0.3 2 23 713 734 712 734 0.97

9 15 0.018 1.6 10.0 1.9 1 23 740 762 740 762 0.96

10 15 0.0019 0.18 13.1 1.7 1 23 768 790 768 790 0.98

11 15 0.0017 0.15 13.3 5.0 1 23 799 821 799 821 0.99

12 15 0.0057 0.52 11.6 2.1 2 23 867 888 867 888 0.97

13 15 0.013 1.2 10.5 3.8 1 23 905 927 905 927 0.96

14 15 1.7e-06 0.00016 22.7 0.7 1 23 933 955 933 955 0.98

15 15 1.8e-07 1.6e-05 25.8 3.1 1 23 961 984 961 984 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.8	1.7e+02	3.7	0.2	3	23	124	144	122	144	0.93
2	15	0.002	0.18	13.1	2.8	1	23	309	331	309	331	0.99
3	15	3e-05	0.0028	18.8	0.4	1	23	337	360	337	360	0.97
4	15	0.0039	0.35	12.1	1.6	1	23	365	388	365	388	0.94
5	15	0.00025	0.023	15.9	1.5	2	23	565	586	564	586	0.97
6	15	0.00015	0.013	16.6	3.2	1	23	592	614	592	614	0.98
7	15	1.1	1e+02	4.4	5.1	1	23	683	705	676	705	0.97
8	15	0.074	6.7	8.1	0.3	2	23	713	734	712	734	0.97
9	15	0.018	1.6	10.0	1.9	1	23	740	762	740	762	0.96
10	15	0.0019	0.18	13.1	1.7	1	23	768	790	768	790	0.98
11	15	0.0017	0.15	13.3	5.0	1	23	799	821	799	821	0.99
12	15	0.0057	0.52	11.6	2.1	2	23	867	888	867	888	0.97
13	15	0.013	1.2	10.5	3.8	1	23	905	927	905	927	0.96
14	15	1.7e-06	0.00016	22.7	0.7	1	23	933	955	933	955	0.98
15	15	1.8e-07	1.6e-05	25.8	3.1	1	23	961	984	961	984	0.98

Sequence Information

Coding Sequence: ATGAACCACGCAGCCGCAATACCAGGGAACATGGACGTAGATCCGCTGAGCTCGTACGAGTACCCTGCGTACGACAGCTACGCGGCTCAGAGCTACCCGTACGCCAGCAAGTTGCAGCAATCCATCTACCAGGCGTACCAGCAGACTCAACCCAACTACGTCAACACTCAACAACCACAGGAACCATACAACAATTTACAACCACCGGTACAAACACAACAACCCGTAGAACCTGAAATTGCTCCTAAAACTGAGGCACAGGAAGCAGAATCAAAACCAGTTTTAAAAAGGCGAAGAAAGGAGAAAAGTGGGCAGAAAAGTACTTATTGTTCTGAAAAAATCAGAGATGCTACATTCAAATTCTACGGCTGTTCTGTCTGTAACGTCAGTTACAATGCTTTACACGAACTAGACCAACATGTGACCGCACACAAGAACAGAATGACGAGCTACAGGCTGCGGTTaagaaatcaaatcaaaaagaaacagataaaaaaagaaaagaaaaagttaaaaaagatgGTGAAGATTAAGAAAGAAATTGACATAGAAATAAAACCTGAAGACGGTTATATAGGAGAAGAGAAAGCCGCAGATTTTATGAGTAATGGAATTAATCCTAATATGGAACTTAACGAGAGTGTCAATAATGGAATGATTCCTAATGCTGAGTGTAATGGAATAAATCCTATATTAGATTGTAATAATGGACTTGTAATTAATAGTGAAAATAGTGCGGTAGAGGCCCAGAATAGTCAAAATCAAACTGATAATGACTTAAATTCTATAACCAATGATCCTCAGGGTAATGAAACTAGTTCCTTGACCAATGGTAGCAGTGAAGTGGAGAACGCAAGTACTGTGAACAGTAAAGACAAAGAGAATAGCTTGGATGAGGCAGAGTTGACTAATTTAGagaaaatttacaaatgttttgcgTGCCAGAAACAGTTCACGTTGAGCTATTATTTGAAACTGCACGTGAGATCGCATACAGACGAGAAGCCGTACACGTGCAGCGTGTGCGGGCAGTCGTTCATCACGGCCAGCAAGCTCGGGCGCCACAACAAGCGCATCCACCTCGCCGAGCGCTACCAGTGCCGCATCTGCTTCAAGATATACTCCAGGTTCGAGTTGCTGACAGCTCACTTTGACAAGACACACCCTGAAGACAAGTTGGAGGGAGAACCTTATGACTACAACGCAATCCTACCATACCTCAAAGAGCTAGAAGAACAGTTGCGCGCACCAGAGCAGGCGAGCACTATCGAGCCGGAGTGCAAGCTGGAGCAGGACAGCAAGCCCAAGGCTGAGGAGCTGTTCTGGGAGGCGGAGGTGGGGCCGCAACAGCTCGCCGCGCCTCTAGTGGAGGTGCCGACGGATGTGAAGGAAGAGACGTTTGATGAGGACCAGAAAGAACTAGTGCCGAAGCTGGACATCCTCATTGAAGAAGTGAAGGTGGACTTTGACGtgacggtcaagcgcgagttGACCGACGACGAGGCCGCTGCGGATGTACCGGACGACGGTGATGACGGGGTTGCCGATGGGGATGACGGGGGCCAAGTCAAGGATGAGGACAGCCAATCCGACGAGGACTACTTCCCCACCAACACGTGGACGGCCCCTCGCGCCCCGTCGCCCTCGCTGCCCTCCCCGACGGCGTCCCCGCGGCGTCGCGGCGGCGCCCTCACGTGCGAGGTGTGCCACAAGCGCATCAGCAGCGCGTCGTACATGCGCGTGCACCTGCGCACGCACTCGGGCGAGAAGCCCTTCAAGTGCCGCCAGTGCGGCCGCGGCTTCATCACCAGCAGCAAGATGCACCGCCACGTGCTCACGCATGCGCAGGTCGCAGACAAAGATGAAGTGAAGACGGAGGGAGAGGACACGAAGCCGGACGTGGACACTGACGCTGCGGAGCTGCCGATAGAAGATGGCGCTAAGAAACCAGCGAAGAAGAAATCGAAGATGAAGTCTAAGTCGTCGAAGTCGGGTCAGCTAAAGTCGCGTGAAGAGAAGCCTCGCCGCAAGCACCAGAAGAGGCCGCACGCCTGCGAGTACTGCAACCAGAAGTTCCTGCACTTGAATATGCTGGAGGTGCACAAGCAGTCGCACTCGGGCGAGGCGCTGGTGTTGCGCTGCCACTACTGCCTGCAGGACGCGCCCGACCAGCAGGCGCTGCAGGAGCACCAGGCCACGCACCAGGGGCCCAAGCCCTACCTCTGCACTGTCTGCGGGAACACCTACAAGAAGAGGGAGACCATGATCTACCACCGCAAGCGGCACTTGCCGGACAAGGAGTTCGTGTGCGACATCTGCTCGAAGCGCTTCAACGCGGCCTGCAAGCTCAGCAAGCACCTGGTGACGCACCGCGCCGACAAGTTCGTGCTGCGCTACGAGTGCCCCGTGTGCGCGCACATGTTCAACACGCAGTACCACGTGCACATGCATCTGCGCACGCACCAGAAGGAAGGCCTAATCCTAGAAGAAAACCGCAGCGAGATTCTAGCGATGGTCCTCCAAAACGCACGCAAGATCCCCAAACAGGCGTCGACCCCTCTGTCCCTCACGACGGTGCCGGCAGACGAGCGCTCCCGCGTGTGCAACATATGCGGGGAACTGTTCCACCACTTTTATTACTTAGAGGAACATCTCAAGAGCCACGCATCGACGATAGCAATCACAGATGTAGATAAAGAAGACGAGAAGAAATACATTTGTCAAGTTTGTAACAAAGGTTTCAAACTGCATTATTATCTTAAACTCCACAGCTTCACCCACTCGAAGGAGAAACCCTTCATCTGCCAGCAATGCGGGAAGGGCTTCATTACTAAAGGCAAGCTAAAACGTCATTTGGAAACTCACACAGGCTTGAAGAAATACCAATGTCATATCTGCTACAAATTCTTCACGAGGCCGAGTTACCTGCGGATACATATCCGCACGATACATGGCACTCAGGATTATAATTTTAGGTTTGACAAAGGCTATGGCGTCAGTTCTATAGCGATGTCTGCCATGACAATGTCAGATGTCAGTCAGAATAGTATATGA
Protein Sequence: MNHAAAIPGNMDVDPLSSYEYPAYDSYAAQSYPYASKLQQSIYQAYQQTQPNYVNTQQPQEPYNNLQPPVQTQQPVEPEIAPKTEAQEAESKPVLKRRRKEKSGQKSTYCSEKIRDATFKFYGCSVCNVSYNALHELDQHVTAHKNRMTSYRLRLRNQIKKKQIKKEKKKLKKMVKIKKEIDIEIKPEDGYIGEEKAADFMSNGINPNMELNESVNNGMIPNAECNGINPILDCNNGLVINSENSAVEAQNSQNQTDNDLNSITNDPQGNETSSLTNGSSEVENASTVNSKDKENSLDEAELTNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCSVCGQSFITASKLGRHNKRIHLAERYQCRICFKIYSRFELLTAHFDKTHPEDKLEGEPYDYNAILPYLKELEEQLRAPEQASTIEPECKLEQDSKPKAEELFWEAEVGPQQLAAPLVEVPTDVKEETFDEDQKELVPKLDILIEEVKVDFDVTVKRELTDDEAAADVPDDGDDGVADGDDGGQVKDEDSQSDEDYFPTNTWTAPRAPSPSLPSPTASPRRRGGALTCEVCHKRISSASYMRVHLRTHSGEKPFKCRQCGRGFITSSKMHRHVLTHAQVADKDEVKTEGEDTKPDVDTDAAELPIEDGAKKPAKKKSKMKSKSSKSGQLKSREEKPRRKHQKRPHACEYCNQKFLHLNMLEVHKQSHSGEALVLRCHYCLQDAPDQQALQEHQATHQGPKPYLCTVCGNTYKKRETMIYHRKRHLPDKEFVCDICSKRFNAACKLSKHLVTHRADKFVLRYECPVCAHMFNTQYHVHMHLRTHQKEGLILEENRSEILAMVLQNARKIPKQASTPLSLTTVPADERSRVCNICGELFHHFYYLEEHLKSHASTIAITDVDKEDEKKYICQVCNKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHIRTIHGTQDYNFRFDKGYGVSSIAMSAMTMSDVSQNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00952075;
90% Identity: iTF_01029504;
80% Identity: -