Basic Information

Insect: Mythimna lalbum
Gene Symbol: ZNF296
Assembly: GCA_949319445.1
Location: OX439375.1:11057178-11065886[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 2e+02 3.7 0.2 3 23 121 141 119 141 0.93

2 15 0.0022 0.21 13.1 2.8 1 23 301 323 301 323 0.99

3 15 3.4e-05 0.0033 18.8 0.4 1 23 329 352 329 352 0.97

4 15 0.0043 0.42 12.1 1.6 1 23 357 380 357 380 0.94

5 15 0.00029 0.028 15.8 1.5 2 23 557 578 556 578 0.97

6 15 0.00016 0.016 16.6 3.2 1 23 584 606 584 606 0.98

7 15 1.2 1.2e+02 4.4 5.1 1 23 675 697 668 697 0.97

8 15 0.023 2.2 9.9 0.1 2 23 705 726 704 726 0.97

9 15 0.02 2 10.1 1.9 1 23 732 754 732 754 0.96

10 15 0.0021 0.21 13.1 1.7 1 23 760 782 760 782 0.98

11 15 0.0019 0.18 13.3 5.0 1 23 791 813 791 813 0.99

12 15 0.0063 0.62 11.6 2.1 2 23 859 880 859 880 0.97

13 15 0.008 0.78 11.3 3.8 1 23 897 919 897 919 0.96

14 15 1.9e-06 0.00019 22.7 0.7 1 23 925 947 925 947 0.98

15 15 2e-07 2e-05 25.8 3.1 1 23 953 976 953 976 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	2e+02	3.7	0.2	3	23	121	141	119	141	0.93
2	15	0.0022	0.21	13.1	2.8	1	23	301	323	301	323	0.99
3	15	3.4e-05	0.0033	18.8	0.4	1	23	329	352	329	352	0.97
4	15	0.0043	0.42	12.1	1.6	1	23	357	380	357	380	0.94
5	15	0.00029	0.028	15.8	1.5	2	23	557	578	556	578	0.97
6	15	0.00016	0.016	16.6	3.2	1	23	584	606	584	606	0.98
7	15	1.2	1.2e+02	4.4	5.1	1	23	675	697	668	697	0.97
8	15	0.023	2.2	9.9	0.1	2	23	705	726	704	726	0.97
9	15	0.02	2	10.1	1.9	1	23	732	754	732	754	0.96
10	15	0.0021	0.21	13.1	1.7	1	23	760	782	760	782	0.98
11	15	0.0019	0.18	13.3	5.0	1	23	791	813	791	813	0.99
12	15	0.0063	0.62	11.6	2.1	2	23	859	880	859	880	0.97
13	15	0.008	0.78	11.3	3.8	1	23	897	919	897	919	0.96
14	15	1.9e-06	0.00019	22.7	0.7	1	23	925	947	925	947	0.98
15	15	2e-07	2e-05	25.8	3.1	1	23	953	976	953	976	0.98

Sequence Information

Coding Sequence: ATGAACCACGCACCCACAATACCAGGGAACATGGACATCGATCCGCTGAGCTCGTACGAGTACCCGGCGTACGACAGCTACGCGGCCCAGGCATATCCATACCCCAGCAAGTTGCAGCAGTCCATCTACCAGGCGTACCAACAGACACAATCTAACTACGTGAACCCACAACCACAGGAACCGTATCCACAGCCACCGTTACCAACACAACAGCCTGTAGAACCTGAAATTGCTCCTAAAACTGAGACGAAGGAAGCGGAATCAAAAACAGTCTTAAAAAGACGAAGAAAGGAGAAAAATGGacaaaaaagtacttattgttCTGAAAAAATCAGAGATGCTACGTTCAAATTCTACGGCTGTTCCGTCTGTAATGTCAGTTACAATGCCTTACACGAGCTAGACCAACATGTGACCGCACACAAAAACAGAATGACTAGCTACAGACTGAGGTTaagaaatcaaatcaaaaagaaacagataaagaaagaaaagaagaagttaAAAAAGATggtgaaaataaagaaagaaattgATATAGACATTAAACCTGAAGATGGTTATATAGGGGAAGAGAAAGCCGCTGATTTTATGAGTAATGGAATCAATTCTAATATCGAACTTAATGGGATGATTCCTAATGCTACGTGTAATGGGACAAATCCTACTTTAGACTGTAATAATGGACTAGTAATAAATAGTGAAAATAGTGCAGTAGACGCCCAAAGTAGTCAAAATCAAACTGATAGTGACTTAAATTCTATAACCAATGATCCTCAGGGTAATGAGACTAGTTCCATGAGCAATGGTGGTGATGACGGAGAGAGCGCAAGTGGTGTGAATAGCAAAGACAAAGAGAATAGCTTGGATGAGGCGGAGTTGACTAACTTAGAGaaaatttacaaatgttttgCGTGCCAGAAACAGTTTACGTTGAGCTATTATTTGAAACTGCACGTGAGATCACATACAGACGAGAAGCCGTATACATGCAGCGTGTGCGGGCAGTCGTTCATCACGGCCAGCAAGCTCGGGCGTCACAACAAGCGCATCCACCTCGCTGAGCGCTACCAGTGCCGCATCTGCTTCAAGATTTATTCCAGGTTTGAGTTGCTGACGGCTCACTTCGACAAGACACACCCTGAAGACAAGTTAGATGGAGAACCTTATGACTACAATGCAATCCTACCGTATCTCAAAGAGCTGGAAGAACAGCTGCGCGCGCCAGAGCAGGCCAGCACTACCGAGCCGGACTGTAAGTTAGAGCAGGACAACAAGCCCAAGGCTGAGGAGCTGTTCTGGGAGGCAGAGGTGGGCCCGCACCAGCTCGCCGCGCCGCTGGTCGACGCGCCGACGGATGTGAAGGAAGAGACGCCTGATGAGGACCAAAAAGAGCTGGTGCCCAAGCTGGACATCCTCATTGAAGAAGTGAAGGTGGACTTCAACGTGTCGGTCAAGCGCGAGTTGTCCGACGACGAGGCCGCCGCCGATGTAGCAGACGACGGGGACGATGGGGCAGCTGATGCGGATGACGGGGGCCCAGTTAAAGATGAGGACAGCCAATCCGACGAGGACTACTTCCCGTCCAACACGTGGACGGCCCCGCGCGCGCCGTCGCCGTCGCTGCCGACGCCGACGGCGCCcccgcggcggcgcggcggcgcgctcACGTGCGACGTGTGCCACAAGCGCATCAGCAGCGCGTCCTACATGCGCGTGCACCTGCGCACGCACTCGGGCGAGAAGCCCTTCAAGTGCCGCCAGTGCGGCCGCGGCTTCATCACCAGCAGCAAGATGCATCGCCACGTGCTCACCCACGCGCAAGTTGCAGATAAAGGTGAGGTAAAGACGGAGGGAGAGGACACGAAGCCAGATGTAGACACTGACACTGCGGAGCTACCCATAGAAGATGGTGCTAAAAAACCAGCGAAGAAGAAATCGAAGATGAAGTCTAAGTCGTCGAAGTCGGGTCAGCTGAAGTCGCGCGAAGAGAAGCCGCGCCGCAAGCACCAGAAGAGGCCGCACGCCTGCGAGTACTGCAACCAGAAGTTCCTGCACCTGAACATGCTGGAGGTGCACAAGCAGTCGCACTCGGGCGAGGCGCTGGTGCTGCGCTGCCACTACTGCCTGCAGGACGCGCCCGACCAGGAGGCCCTGCAGGCGCACCAGGCCACGCACCTGGGGGCCAAGCCCTACCTCTGCACCGTCTGCGGGAACACCTACAAGAAGAGGGAGACCATGATCTACCACCGCAAGCGGCACCTGCCGGACAAGGAGTTCGTGTGCGACATCTGCTCGAAGCGCTTCAACGCGGCGTGCAAGCTCAGCAAGCACCTCGTGACGCACCGCGCCGACAAGTTCGTGCTGCGCTACGAGTGTCCCGTCTGCGCGCACATGTTCAACACGCAGTACCACGTACACATGCACCTGCGCACGCACCAGAAGGAAGGCCTCATCTTAGAAGAAAACCGCAGCGAGATATTAGCGATGGTCCTCCAGAACGCGCGTAAGATCCCCAAACAGGCGTCCTCCCCGCTCTCCCTCACCACGGTGCCGGCAGACGAGCGGTCCCGCGTGTGCAACATATGCGGCGAACTCTTCCACCACTTCTACTACTTGGAGGAGCACCTCAAGAGCCACGCCTCCACCATAGCCATCACAGACATAGAGAAAGAAGACGAGAAGAAATACATCTGTCAGATTTGTAATAAAGGTTTCAAATTGCACTACTATCTCAAACTCCACAGCTTTACGCACTCGAAGGAGAAACCCTTCATTTGCCAGCAGTGTGGGAAAGGGTTCATTACGAAAGGTAAGCTGAAACGCCATCTGGAGACTCACACAGGCTTGAAGAAGTACCAATGTCACATCTGCTATAAGTTCTTCACCAGGCCCAGTTATCTGCGAATACATATACGTACGATACATGGGACGCAAGATTATAACTTTAGGTTCGACAAAGGCTATGGTGTAGGTTCCATCGCTATGTCAGCAATGTCAGATGTCAGTCAGAATAGTATATGA
Protein Sequence: MNHAPTIPGNMDIDPLSSYEYPAYDSYAAQAYPYPSKLQQSIYQAYQQTQSNYVNPQPQEPYPQPPLPTQQPVEPEIAPKTETKEAESKTVLKRRRKEKNGQKSTYCSEKIRDATFKFYGCSVCNVSYNALHELDQHVTAHKNRMTSYRLRLRNQIKKKQIKKEKKKLKKMVKIKKEIDIDIKPEDGYIGEEKAADFMSNGINSNIELNGMIPNATCNGTNPTLDCNNGLVINSENSAVDAQSSQNQTDSDLNSITNDPQGNETSSMSNGGDDGESASGVNSKDKENSLDEAELTNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCSVCGQSFITASKLGRHNKRIHLAERYQCRICFKIYSRFELLTAHFDKTHPEDKLDGEPYDYNAILPYLKELEEQLRAPEQASTTEPDCKLEQDNKPKAEELFWEAEVGPHQLAAPLVDAPTDVKEETPDEDQKELVPKLDILIEEVKVDFNVSVKRELSDDEAAADVADDGDDGAADADDGGPVKDEDSQSDEDYFPSNTWTAPRAPSPSLPTPTAPPRRRGGALTCDVCHKRISSASYMRVHLRTHSGEKPFKCRQCGRGFITSSKMHRHVLTHAQVADKGEVKTEGEDTKPDVDTDTAELPIEDGAKKPAKKKSKMKSKSSKSGQLKSREEKPRRKHQKRPHACEYCNQKFLHLNMLEVHKQSHSGEALVLRCHYCLQDAPDQEALQAHQATHLGAKPYLCTVCGNTYKKRETMIYHRKRHLPDKEFVCDICSKRFNAACKLSKHLVTHRADKFVLRYECPVCAHMFNTQYHVHMHLRTHQKEGLILEENRSEILAMVLQNARKIPKQASSPLSLTTVPADERSRVCNICGELFHHFYYLEEHLKSHASTIAITDIEKEDEKKYICQICNKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHIRTIHGTQDYNFRFDKGYGVGSIAMSAMSDVSQNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00952075;
90% Identity: iTF_01029504;
80% Identity: -