Mpal021954.1
Basic Information
- Insect
- Mythimna pallens
- Gene Symbol
- retn
- Assembly
- GCA_961205895.1
- Location
- OY540842.1:15001539-15007119[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-19 1e-15 58.9 0.0 18 89 17 86 12 86 0.94 2 2 5 1.6e+04 -2.7 0.0 25 38 214 227 176 229 0.58
Sequence Information
- Coding Sequence
- ATGTTCTTATTACCATTGCGGTGGTTATTAAGTTATCCttatataaGCACTCCAATCAACCGGCTACCTATAATGGCGAAGTCAGTGCTAGACCTGTACGAGTTGTACAACTTGGTGATCGCACGCGGTGGTCTGGTGGAGGTGATCAATAAGAAGCTGTGGCAAGAGATTATCAAGGGGCTGCGACTGCCGTCCTCCATCACCTCTGCTGCCTTTACGTTACGCACACAATATATGAAATACCTGTATGACTATGAGTGCGAGAAGAAAAACCTATCAACCAGGAGCGAGCTGGACGCAGCTATAGAAGGCAACAAGCGTGAGGGGCGCCGCGCATCGGGACAATATGACGCACAAGCTGCACTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGTTGTCGCAGCACATGCAGCCACTGTCACTGTCCCTCGGGGGCGTAGCACCCCGCCTGCCGCCGCTGCCGCCGCACGCGCCGCATCTCGCGCAGCACGATATCGAGTATAGGGTGCGCGAGTATATGAAGATGATACAGCAGCAGAGAGAGCTTATGAGAAATGGCTCCGAATCACCTCCCAGCAATGGTCCAGCACCAATAATGTCACCCCGCGATGCAGCCGCCCTCAGTGCTATAGATGTCTCCCGCCTCACTCTCTGGTCGCtctacaacaataataataacaacagtcCACAACCGGACCTTGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGCTGACGTCGGGCGGCAAGCGCGAGGCGTGCCGCTCGCCGGCGCCGCCCGCCAAGCGCCGCACGTCGCGGCCCGCGTCGCGCCCCGCGTCGCCGTCGCCGCGCTCCGACCTGCCGTCGCCGCCGCAGCACCGCCACAGCCGCAGGGACGCTACCTCGCCGCCGCAGATCAACGGCATGCCCAATACCAATGGTGTTAATGGAGCTGCTTTCAAAATTACTACCAGAGGAGACGCGAGCACAGGAGACCAGCAACTAGTAGTGTCAATAGAGCTGAACGGAGTCACCTATGAAGGAGTACTCTTCCCCTCAGGAAATGGTCAGAACGGACACAGACAAATGGTGtcttaa
- Protein Sequence
- MFLLPLRWLLSYPYISTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLTSGGKREACRSPAPPAKRRTSRPASRPASPSPRSDLPSPPQHRHSRRDATSPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -