Mimp050623.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mythimna impura
Gene Symbol
Znf142
Assembly
GCA_905147345.1
Location
LR990365.1:10539474-10550343[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 47 1.9 2.9e+02 4.0 0.8 1 23 42 64 42 64 0.94
2 47 4.9 7.7e+02 2.7 0.1 2 22 93 113 92 115 0.88
3 47 0.029 4.6 9.7 0.3 2 23 136 158 135 158 0.94
4 47 0.0086 1.3 11.3 4.8 1 23 163 186 163 186 0.96
5 47 0.0034 0.54 12.6 1.2 1 23 191 214 191 214 0.96
6 47 1.1 1.7e+02 4.8 0.2 2 23 217 239 216 239 0.92
7 47 1.4 2.2e+02 4.4 1.0 2 21 246 265 245 266 0.92
8 47 0.41 65 6.0 0.4 1 23 325 348 325 348 0.90
9 47 0.035 5.5 9.4 0.2 3 23 377 398 375 398 0.94
10 47 0.82 1.3e+02 5.1 0.2 3 23 422 444 421 444 0.91
11 47 0.0016 0.25 13.6 0.6 3 20 451 468 449 472 0.90
12 47 0.12 19 7.7 0.3 1 23 477 500 477 500 0.94
13 47 0.00022 0.034 16.3 0.5 2 23 506 528 506 528 0.95
14 47 0.001 0.16 14.3 4.0 1 23 532 555 532 555 0.97
15 47 0.0017 0.26 13.6 2.3 1 23 561 583 561 583 0.98
16 47 0.082 13 8.3 1.2 1 23 589 612 589 612 0.93
17 47 0.73 1.2e+02 5.3 0.6 1 23 680 702 680 702 0.94
18 47 0.36 56 6.2 0.0 2 23 730 752 729 752 0.90
19 47 0.00025 0.04 16.2 0.8 2 23 773 795 772 795 0.96
20 47 0.00054 0.084 15.1 4.8 1 23 800 822 800 823 0.95
21 47 0.00043 0.068 15.4 2.3 1 23 827 850 827 850 0.94
22 47 1.5 2.3e+02 4.3 0.7 2 23 853 875 852 875 0.91
23 47 0.094 15 8.1 0.1 2 19 881 898 880 901 0.93
24 47 0.033 5.2 9.5 2.7 2 23 949 971 948 971 0.93
25 47 4.7 7.4e+02 2.7 0.3 2 23 1000 1022 999 1022 0.94
26 47 0.0077 1.2 11.5 0.0 1 23 1044 1067 1044 1067 0.91
27 47 0.0002 0.031 16.5 0.9 1 23 1072 1095 1072 1095 0.94
28 47 0.00012 0.019 17.2 1.1 1 23 1101 1124 1101 1124 0.96
29 47 0.00034 0.053 15.8 1.0 2 23 1130 1152 1129 1152 0.97
30 47 0.0038 0.6 12.4 4.6 1 23 1156 1179 1156 1179 0.97
31 47 0.05 7.9 8.9 0.8 2 23 1186 1207 1185 1207 0.96
32 47 1.2 1.9e+02 4.6 0.7 1 10 1213 1222 1213 1224 0.95
33 47 0.0053 0.84 12.0 3.2 1 23 1266 1288 1266 1288 0.96
34 47 0.05 7.8 8.9 0.2 3 23 1317 1338 1317 1338 0.96
35 47 0.017 2.7 10.4 1.9 1 23 1358 1381 1358 1381 0.96
36 47 7.3e-05 0.012 17.8 0.5 1 23 1386 1409 1386 1409 0.96
37 47 0.016 2.5 10.5 0.6 1 23 1414 1437 1414 1437 0.96
38 47 0.0015 0.23 13.7 1.1 3 23 1441 1462 1440 1462 0.95
39 47 0.022 3.4 10.1 1.4 2 21 1470 1489 1469 1490 0.94
40 47 0.018 2.8 10.3 3.3 1 23 1544 1567 1544 1567 0.94
41 47 1.7 2.7e+02 4.1 0.0 2 23 1640 1663 1639 1663 0.94
42 47 3.5e-05 0.0054 18.9 0.1 3 23 1670 1691 1669 1691 0.94
43 47 0.0061 0.97 11.8 2.8 2 23 1696 1718 1695 1718 0.94
44 47 0.019 3.1 10.2 5.1 1 23 1723 1746 1723 1746 0.96
45 47 4.2e-05 0.0067 18.6 5.0 1 23 1750 1773 1750 1773 0.97
46 47 0.00049 0.078 15.2 0.3 2 23 1780 1801 1779 1801 0.96
47 47 2e-05 0.0032 19.6 0.5 1 23 1807 1829 1807 1829 0.98

Sequence Information

Coding Sequence
ATGAAAGGTAAAAAACCGCAGAAAAGCAAAGAAAACAAAGAATCATCATCGATGAGGAGGCGACGAAACCTACAAATTCTATTCAACAACACATCTATCATTCCTTTTAAATGGCGGGGGAAGTACTTGTGTTTCTTTTGCAGCAAAGATGTCGCCGAATATACTGAGTTGAGAAATCATACGAAAGAACACGGCAACTGTTCCATAAACGATCATTCCCTTAAGGTCCTCAAAGGAGGAAAGAACATGGAAATCAAAATAGACATTTCATTTATCACTTGTGAAGTATGCACGGAAACATTAGCTACTTTCGATGAAATCATCAATCATTTGTTCGACAAACATGAACTTGAGTACGATAAGGAAGTTGAAATGGCTATAGAGGAATACAAGCTTGCTGATCTCAGTTGCACCGGATGCTCTGAAAAGTTCACTTACTTCGGTTACCTAGTCTCTCATGTCAATAACATACATCCGAAGAACTGCCACGTATGCGAAAAGTGCAACCAAAAGTTCAATAAAACTAGAGATCTATTCTCTCATATGAAAAACTATCACAGAGAGGGAGGGTATCAATGCGAAATGTGCCCCCAAACCTTCagttcattaaatattttgagaAAACATCGAAATAACAGGCATTTAACGCGATGCAACATATGCAATTTGAAACTACCCTCAGCTGCTTTGAGGCAGAAACACCTCGAATTAGAACATCCGGACGATGGGTCTCTGCAATGTGACGCTTGCTTGAAAGAGTTCCACACGAAACAAGGTCTAAAGATGCACTCAAGGAAATGTAAAGGAGAAGAGCTATTCGGAATTGCCATCAAAGAAGAACACGTCGCTATGGACTTAGACCTGAACTACGAGGATCGATCCAACAAAACTTGTGTCAAACAAATCAGGCAAAATATAGTTACAGTTTTAAACATGTCTACCGCAATACCTTTTAATTTTTACAAGAATAGGTTCAACTGCTTTTATTGCTCCAAAGATTTCCTGGATTCGGAGTTGTTGAGGGAACATGCGGAGTTAGAACACCCTTTTTGCGATATCAAAGCgaaatgtattagaaagtgtAGGGAATCCGTCGCTTGCGTCAAAATCGATGTTTCAGAACTCGCTTGCAAAGTCTGCTATGAGACACTGACAGACTTGGATCATCTGATCGATCACTTAATAGTTAAACACAATGCGAATTATGATAAATCGATAACAACATGTCTACAACCTTATAAGCTAGCCAAAGATAACATGGCATGTCCACTTTGCACTGATGTAGTGTTTAACTTCTTCGGAACGCTTCTGAAACACATGAATACGGAGCATACGAACAACAATATCATTTGTGTTTACTGCGGCCAAACGTTTCGTAGGGACCAAAATTTACGTGTTCACATTTGGAGGCATCACAGAGTTGGGAGGTTTAAATGTAACATTTGTGATGCTGAGTGCAACATTCCGTCTCGCTTATACATGCACATGGCTGAAGCACACGGTGTTAAAGCCGCCAAATGTCCGAAATGCCCCGAGTCTTTCTCTACGCAGTACGAGAGGCAGAAGCATTTAATTAACGTCCACAATTCAGGCCACAAATGCTCTGTCTGTGGTAAACTGTTTACGAGAATGTCTTTCATGAATAACCATTTAAGAAGAACTCATATGAAAGAGAAGAAGTATGAATGTCAAGTTTGCTTTACAAGGTTCTTTAACACCGTGCTTTTGAAGAAGCATATGTTGAAGCATAGTGGACAGAAGAAATATTCTTGCGATATTTGTGGAGAACGGTTCTATTGGCGCAAAACTATGAAGACACATAGAGATAGGCTGCACGCTCGAACGACTAATCCTCCCCCTCCTCCACCTCCAGTTATACCAACTATACCAAGACGCGAGGGGGTTATAAAAAGATTGTATGACGTTTGCAATTTGGAAACAGAGGTGACAAAGCACAGTGCTAGTTATCTAAGGAGGAGGAATCTACAAATATTGCTCAACAATACAACTTTAATACCCTTTAAATGGCGAGGGAAATACCTCTGTTTCTATTGCGGTGACGATACGAACACGCCCGAACGTCTCCGGAAACACACGAAAGGCCACGGACCTTGCAGTgaaagagacagagctataagACTAGTTAAATCAGCTGATGTAGAAATCAAAATTGATGTTTCTGACGTCACTTGCGAAATTTGCTCCGAAAGCTTCCCTTTCTTAGATGAAATTATCGAGCATTTGATTTTTAAACACCAATTGCCTTACGAGAAAGATGTAGAAATGCTTTTGTCAGCATATAGGCTGGTAGATCTTCAGTGCCTTCTTTGCGATAAAACTTTCAACTTTTTACGTAAATTAATCAGCCATATGAATACTGCTCATCCAAATAATAGCTTTGAGTGTTCCGAATGTAAAaagacatttaataaaaaaagggaTTTAGATTCGCACTTACGATTCCATCATAAGAAACACCATTCTTGTACAAAATGTGATGAAACGTTCCCAACGCACTCCGCGCTACAGATCCATAGGTCTAACGCTCATTCTTCAACGTGTAATGTCTGCTTCCAAGTATTTTCATCAGACGGCAAGCGTTTAGCTCATTTTAAATCTGACCATGATACTGAACATACCGAATGTGGATTCTGCAATAAAGTTCTAACAACAAAACAAGCTTTTATCAGACATGCTGCAAATTGCGAATATAAACCTAAGGAAGACACCGTTATAATTGACGACGAAGACAAAAAAGTATCCGtcaaagaaataagaaaaagtTTGGCAGCAATCTTTAACATGACTACTGCACTTCCTTTCAAATTCTTTATGAATCGGTTAAGATGTTTCTATTGTACTAGAGACTTTACATCATGCGAGGACTTGAAAGAACATTCATTGAGCGAGCATCCTCATTGCGATATATCCTTTAAATCTATGAGGTTGCGTAACAGATACGATGGTGTCCAAATCAAAGTGGACACTTCGTCCTTATCCTGTAGACTATGCCACATCGCTTTACAGGATCTGAACGACTTGATCGACCATTTGACGAAAGAACATAAAGTAAAATGTGATAGGACCGTTGAGAGTAACCTACAACCGTTTAAACTGATTAAAGACAACTATCCATGTCCTATTTGTGGTGAAGTGTACAGATATTTTGGCGTCTTACTCAAGCATGTTAGTGCGTCTCACAGTGGCAATAAACACATATGCATGTACTGCGGTAAAGCCTTCAGGACGGACCCTAATCTCAGAGCTCACGTGTCCAGGCGACATAAAACCGCCGACAATCACAAGTGTACTAATTGCGATCTACAATTTCCTACAAATAGTGCGTTAAGAAATCATCAAGGAACTGTTCATGGTACAAAATTAGTTCAATGCTTCGAATGCTCCGAGAAATTCACTTCGCAATATTCAATGCAACGACACTTGATCACTTCTCATGGTACTGGACATAAGTGCACGTACTGTGAcaaactttttactaaaaattcgTTTATGGTCAACCATGTGAGGCGATCTCACTTAAAAGAGAAGAATGTAGAATGTTCTGTGTGctttgaaaagtttttcgacagTCAGAGGCTAAAAATGCATATGGTTAAGCATGTAGGAGAAAGGAATTTCCATTGTGATATTTGTGGCAAAAAGTTTTTGTGGAAAAGGAATTTGAGAGATGGTCTGCCAGGACCGTACGAAGGCTGTACTTCTGAGCGACGACGGAAAAACTTGAAAATTCTGTTCAACCACACTACGATCATGCCTTTTAAATGGCGAGGCAAATACCTCTGCTTCTACTGCGGAAAAAACTATACAGAGTACACAGAATTTAGAAAACACACAAAATCCCACGGACTATGCACCACTAAAGATTACTCCCTCAAACTGATCAAAGGAAATaacgttgaaattaaaatcgacGTCTCGGAAATTGGTTGCGATATCTGCAATGAATCCTTCAACAGATTCGAGGAAATAATCGATCATTTGATCTCGAAACATAATATGgaatacaacaaaaatattgATATACCCTTCCAAGAGTACCGATTAGTCGATTTTCGATGTCTGCACTGTGAAGAACAGTTTTCTTACTTTGGATATTTAGTTAAACATGTCAACAACGTTCACCCACAGAACTGTTTCATTTGTGACGATTGTGGGGTTACTTTCAACAAGAAAAGGGACTTGTCAATACATTTGAGGAACTATCACAGACAGGGAGGATATCCGTGTGATTTGTGTTTAAAGAACTTCGAAACACGACTCGTTTTGCGGAGGCATCAAAATAATATGCATTTTAGGCATTGTAAAAGCTGTGGTTTACGATTTGCCTCTCTTTCTCTGTTGCAAAAACATGTACAAGTCGATCACCCCCAAAATGAAAGTAACATGAAGTGTAGTTACTGCTCCAAAGAGTTCCACACTTCTTTAGGTTTAAAACAGCATATAAGCAAAtgtaaagtcaaaataatttcgCAGGTCGAACCTCAAACTTCTTTCTTAAACGACAGCAACATAGAACCTAAGAAAAAGCAAAATATCCTGCAAATAAGACAGAATATACAGTGTGTACTAAACATGTCGACTGCGGTGCCTTTCAAATTCTTTTCCAAATATTCTTGTTTTTATTGCTCAAAGAAATTCGTAGAATTTGACGAATTACGCCACCATACTAGCCTAGAGCATCCTGTGTGCGATTTGAAGTCCAAATGCATGAAAAAATGCAAAGGAGAAAGGATAGCGGTCAAAATCGACATCTCTGCTTTAGCTTGTAAGATATGTTGCCTCCCTATGTCTAACTTAGAAGATCTGGTAACCCATTTGATAGCAGAACATAAGGCGAATTATGATACGTCGATTTCCGGCTGTTTAGAGCCTTTTAAGGTTATAAAAGACAACATGCCTTGTCCTATATGCCCGGACACCGTCTTCCGATACTTCGGAATTTTACTTCGACATATGAACTCCGAACATAGCAACAATAATCGGATCTGTGACTTCTGCGGTCGAAGCTTCCGAAACGCGGCGAATCTCAACGTGCATATAACTTACGCGCACACAGGTTCTTGCGAATGTGACATTTGTGGAGTTAAATACAAGAATCAATGGTGTTTAGCGCGACATAGGGCCAGGACACACGATGCGAAGGACCATAAATGCCCAAAATGTCCAGAGCAGTTCCAATCACAGTACCATAAACAGAAAcatttgataaaaatgcataatgttgGTCACAAATGTAGTTATTGCGGAAAAATGTTTACTAGAAACTCGTTTATGAAAGATCATGTGAGAAGGACgcatttgaaagaaaagaataTTCCTTGTTCGATATGcaatgaaaagtttttcgacaaTTATCTTCTAAGAATGCATATGGTGAAACACGAGGGTGATAGGAAATTTAGTTGTTCTGTTTGTGGGAAAGCATTTTTAAGACGAAGCAATTTGAGCTCGCATATGGAGATGCATAAAAAATATGGGCATGTGCAGTTACAGATATAA
Protein Sequence
MKGKKPQKSKENKESSSMRRRRNLQILFNNTSIIPFKWRGKYLCFFCSKDVAEYTELRNHTKEHGNCSINDHSLKVLKGGKNMEIKIDISFITCEVCTETLATFDEIINHLFDKHELEYDKEVEMAIEEYKLADLSCTGCSEKFTYFGYLVSHVNNIHPKNCHVCEKCNQKFNKTRDLFSHMKNYHREGGYQCEMCPQTFSSLNILRKHRNNRHLTRCNICNLKLPSAALRQKHLELEHPDDGSLQCDACLKEFHTKQGLKMHSRKCKGEELFGIAIKEEHVAMDLDLNYEDRSNKTCVKQIRQNIVTVLNMSTAIPFNFYKNRFNCFYCSKDFLDSELLREHAELEHPFCDIKAKCIRKCRESVACVKIDVSELACKVCYETLTDLDHLIDHLIVKHNANYDKSITTCLQPYKLAKDNMACPLCTDVVFNFFGTLLKHMNTEHTNNNIICVYCGQTFRRDQNLRVHIWRHHRVGRFKCNICDAECNIPSRLYMHMAEAHGVKAAKCPKCPESFSTQYERQKHLINVHNSGHKCSVCGKLFTRMSFMNNHLRRTHMKEKKYECQVCFTRFFNTVLLKKHMLKHSGQKKYSCDICGERFYWRKTMKTHRDRLHARTTNPPPPPPPVIPTIPRREGVIKRLYDVCNLETEVTKHSASYLRRRNLQILLNNTTLIPFKWRGKYLCFYCGDDTNTPERLRKHTKGHGPCSERDRAIRLVKSADVEIKIDVSDVTCEICSESFPFLDEIIEHLIFKHQLPYEKDVEMLLSAYRLVDLQCLLCDKTFNFLRKLISHMNTAHPNNSFECSECKKTFNKKRDLDSHLRFHHKKHHSCTKCDETFPTHSALQIHRSNAHSSTCNVCFQVFSSDGKRLAHFKSDHDTEHTECGFCNKVLTTKQAFIRHAANCEYKPKEDTVIIDDEDKKVSVKEIRKSLAAIFNMTTALPFKFFMNRLRCFYCTRDFTSCEDLKEHSLSEHPHCDISFKSMRLRNRYDGVQIKVDTSSLSCRLCHIALQDLNDLIDHLTKEHKVKCDRTVESNLQPFKLIKDNYPCPICGEVYRYFGVLLKHVSASHSGNKHICMYCGKAFRTDPNLRAHVSRRHKTADNHKCTNCDLQFPTNSALRNHQGTVHGTKLVQCFECSEKFTSQYSMQRHLITSHGTGHKCTYCDKLFTKNSFMVNHVRRSHLKEKNVECSVCFEKFFDSQRLKMHMVKHVGERNFHCDICGKKFLWKRNLRDGLPGPYEGCTSERRRKNLKILFNHTTIMPFKWRGKYLCFYCGKNYTEYTEFRKHTKSHGLCTTKDYSLKLIKGNNVEIKIDVSEIGCDICNESFNRFEEIIDHLISKHNMEYNKNIDIPFQEYRLVDFRCLHCEEQFSYFGYLVKHVNNVHPQNCFICDDCGVTFNKKRDLSIHLRNYHRQGGYPCDLCLKNFETRLVLRRHQNNMHFRHCKSCGLRFASLSLLQKHVQVDHPQNESNMKCSYCSKEFHTSLGLKQHISKCKVKIISQVEPQTSFLNDSNIEPKKKQNILQIRQNIQCVLNMSTAVPFKFFSKYSCFYCSKKFVEFDELRHHTSLEHPVCDLKSKCMKKCKGERIAVKIDISALACKICCLPMSNLEDLVTHLIAEHKANYDTSISGCLEPFKVIKDNMPCPICPDTVFRYFGILLRHMNSEHSNNNRICDFCGRSFRNAANLNVHITYAHTGSCECDICGVKYKNQWCLARHRARTHDAKDHKCPKCPEQFQSQYHKQKHLIKMHNVGHKCSYCGKMFTRNSFMKDHVRRTHLKEKNIPCSICNEKFFDNYLLRMHMVKHEGDRKFSCSVCGKAFLRRSNLSSHMEMHKKYGHVQLQI*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00449478;
90% Identity
iTF_00888501;
80% Identity
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