Basic Information

Insect: Leucania comma
Gene Symbol: -
Assembly: GCA_958295575.1
Location: OY282492.1:5945401-5952919[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 42 1.9 2e+02 3.9 0.7 1 23 48 70 48 70 0.94

2 42 4.3 4.6e+02 2.8 0.1 2 22 99 119 98 121 0.88

3 42 0.025 2.7 9.8 0.3 2 23 142 164 141 164 0.94

4 42 0.0074 0.8 11.4 4.8 1 23 169 192 169 192 0.96

5 42 0.003 0.32 12.7 1.2 1 23 197 220 197 220 0.96

6 42 0.92 98 4.9 0.2 2 23 223 245 222 245 0.92

7 42 1.2 1.3e+02 4.5 1.0 2 21 252 271 251 272 0.92

8 42 0.36 38 6.1 0.4 1 23 331 354 331 354 0.90

9 42 0.068 7.3 8.4 0.2 3 23 383 404 381 404 0.92

10 42 0.71 76 5.2 0.2 3 23 428 450 427 450 0.91

11 42 0.0014 0.15 13.7 0.6 3 20 457 474 455 478 0.90

12 42 0.1 11 7.8 0.3 1 23 483 506 483 506 0.94

13 42 0.00018 0.02 16.5 0.5 2 23 512 534 512 534 0.95

14 42 0.00088 0.094 14.4 4.0 1 23 538 561 538 561 0.97

15 42 0.0015 0.16 13.7 2.3 1 23 567 589 567 589 0.98

16 42 0.47 51 5.8 3.1 1 23 595 618 595 618 0.93

17 42 1.1 1.2e+02 4.6 0.5 1 23 674 696 674 696 0.94

18 42 0.63 68 5.4 0.1 2 23 724 746 723 746 0.90

19 42 0.0029 0.31 12.7 0.3 2 23 767 789 766 789 0.96

20 42 0.00047 0.05 15.2 4.8 1 23 794 816 794 817 0.95

21 42 0.014 1.5 10.6 2.4 1 23 821 844 821 844 0.94

22 42 1.3 1.4e+02 4.4 0.7 2 23 847 869 846 869 0.91

23 42 0.097 10 7.9 1.3 2 20 875 893 874 898 0.91

24 42 0.029 3.1 9.6 2.7 2 23 943 965 942 965 0.93

25 42 0.0066 0.71 11.6 0.0 1 23 1038 1061 1038 1061 0.91

26 42 0.00017 0.019 16.6 0.9 1 23 1066 1089 1066 1089 0.94

27 42 5 5.3e+02 2.6 0.3 1 15 1095 1109 1095 1110 0.87

28 42 0.0046 0.49 12.1 3.2 1 23 1144 1166 1144 1166 0.96

29 42 0.026 2.8 9.7 0.1 3 23 1195 1216 1193 1216 0.94

30 42 0.015 1.6 10.5 1.9 1 23 1236 1259 1236 1259 0.96

31 42 6.4e-05 0.0068 18.0 0.5 1 23 1264 1287 1264 1287 0.96

32 42 0.014 1.5 10.6 0.6 1 23 1292 1315 1292 1315 0.96

33 42 0.0013 0.14 13.9 1.1 3 23 1319 1340 1318 1340 0.95

34 42 0.019 2 10.2 1.4 2 21 1348 1367 1347 1368 0.94

35 42 0.016 1.7 10.4 3.3 1 23 1422 1445 1422 1445 0.94

36 42 1.5 1.6e+02 4.2 0.0 2 23 1518 1541 1517 1541 0.94

37 42 3e-05 0.0032 19.0 0.1 3 23 1548 1569 1547 1569 0.94

38 42 0.0053 0.57 11.9 2.8 2 23 1574 1596 1573 1596 0.94

39 42 0.017 1.8 10.3 5.1 1 23 1601 1624 1601 1624 0.96

40 42 3.7e-05 0.0039 18.7 5.0 1 23 1628 1651 1628 1651 0.97

41 42 0.00043 0.046 15.3 0.3 2 23 1658 1679 1657 1679 0.96

42 42 1.5e-05 0.0016 19.9 0.6 1 23 1685 1707 1685 1707 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	42	1.9	2e+02	3.9	0.7	1	23	48	70	48	70	0.94
2	42	4.3	4.6e+02	2.8	0.1	2	22	99	119	98	121	0.88
3	42	0.025	2.7	9.8	0.3	2	23	142	164	141	164	0.94
4	42	0.0074	0.8	11.4	4.8	1	23	169	192	169	192	0.96
5	42	0.003	0.32	12.7	1.2	1	23	197	220	197	220	0.96
6	42	0.92	98	4.9	0.2	2	23	223	245	222	245	0.92
7	42	1.2	1.3e+02	4.5	1.0	2	21	252	271	251	272	0.92
8	42	0.36	38	6.1	0.4	1	23	331	354	331	354	0.90
9	42	0.068	7.3	8.4	0.2	3	23	383	404	381	404	0.92
10	42	0.71	76	5.2	0.2	3	23	428	450	427	450	0.91
11	42	0.0014	0.15	13.7	0.6	3	20	457	474	455	478	0.90
12	42	0.1	11	7.8	0.3	1	23	483	506	483	506	0.94
13	42	0.00018	0.02	16.5	0.5	2	23	512	534	512	534	0.95
14	42	0.00088	0.094	14.4	4.0	1	23	538	561	538	561	0.97
15	42	0.0015	0.16	13.7	2.3	1	23	567	589	567	589	0.98
16	42	0.47	51	5.8	3.1	1	23	595	618	595	618	0.93
17	42	1.1	1.2e+02	4.6	0.5	1	23	674	696	674	696	0.94
18	42	0.63	68	5.4	0.1	2	23	724	746	723	746	0.90
19	42	0.0029	0.31	12.7	0.3	2	23	767	789	766	789	0.96
20	42	0.00047	0.05	15.2	4.8	1	23	794	816	794	817	0.95
21	42	0.014	1.5	10.6	2.4	1	23	821	844	821	844	0.94
22	42	1.3	1.4e+02	4.4	0.7	2	23	847	869	846	869	0.91
23	42	0.097	10	7.9	1.3	2	20	875	893	874	898	0.91
24	42	0.029	3.1	9.6	2.7	2	23	943	965	942	965	0.93
25	42	0.0066	0.71	11.6	0.0	1	23	1038	1061	1038	1061	0.91
26	42	0.00017	0.019	16.6	0.9	1	23	1066	1089	1066	1089	0.94
27	42	5	5.3e+02	2.6	0.3	1	15	1095	1109	1095	1110	0.87
28	42	0.0046	0.49	12.1	3.2	1	23	1144	1166	1144	1166	0.96
29	42	0.026	2.8	9.7	0.1	3	23	1195	1216	1193	1216	0.94
30	42	0.015	1.6	10.5	1.9	1	23	1236	1259	1236	1259	0.96
31	42	6.4e-05	0.0068	18.0	0.5	1	23	1264	1287	1264	1287	0.96
32	42	0.014	1.5	10.6	0.6	1	23	1292	1315	1292	1315	0.96
33	42	0.0013	0.14	13.9	1.1	3	23	1319	1340	1318	1340	0.95
34	42	0.019	2	10.2	1.4	2	21	1348	1367	1347	1368	0.94
35	42	0.016	1.7	10.4	3.3	1	23	1422	1445	1422	1445	0.94
36	42	1.5	1.6e+02	4.2	0.0	2	23	1518	1541	1517	1541	0.94
37	42	3e-05	0.0032	19.0	0.1	3	23	1548	1569	1547	1569	0.94
38	42	0.0053	0.57	11.9	2.8	2	23	1574	1596	1573	1596	0.94
39	42	0.017	1.8	10.3	5.1	1	23	1601	1624	1601	1624	0.96
40	42	3.7e-05	0.0039	18.7	5.0	1	23	1628	1651	1628	1651	0.97
41	42	0.00043	0.046	15.3	0.3	2	23	1658	1679	1657	1679	0.96
42	42	1.5e-05	0.0016	19.9	0.6	1	23	1685	1707	1685	1707	0.98

Sequence Information

Coding Sequence: ATGGTGTGGTTTGCCAGGAAGACAGGTAAAAAACCGAGAAAAAGCAAGGATAACAAAGAATCATCATCGATGAGGAGGCGACGGAACCTACAGATTCTATTCAACAACACATCTATCATTCCTTTTAAATGGCGGGGGAAGTACTTGTGTTTCTTTTGCAGCAAAGATGTCGCCGAATATAATGAGTTAAGAAATCATACAAAAGAACACGGCAATTGCTCCATAAACGACCATTCACTTAAGGTCCTCAAAGGAGGAAAAAACATGGAAATCAAAATAGACATTTCATTTATCACTTGTGAAGTATGCACGGAAACATTAGCTACTTTCGACGAaatcataaatcatttattcGACAAACATGAACTTGAGTACGATAAGGAAGTAGAAATGGCTATAGAGGAATACAAGCTTGCTGATCTCAGTTGCACTGGATGCTCTGAAAAGTTCACGTACTTCGGTTACCTAGTCTCTCATGTCAATAACATACACCCAAAGAACTGTCACGTTTGCGAAAAGTGCAACCAAAAGTTCAATAAAACGAGAGATCTATTCTCTCACATGAAAAACTATCACAGAGAGGGAGGGTATCAATGCGAAATGTGTCCCCAAACCTTCAGctcattaaatattttgagaaaACACAGAAATAACCGGCATTTAACGCGGTGCAACATATGCAATTTGAAACTACCCTCAGCTGCATTGAGACAGAAACACCTCGAATTAGAACATCCGGACGACGGGTCTCTGCAATGTGACGCTTGCTTGAAAGAGTTCCATACGAAACAAGGTCTTAAAATGCACTCGAGGAAGTGTAAAGGAGAAGAGCTATTCGGAATCGCCATCAAAGAAGAACACGTCGCTATGGACTTAGACCTGAACTACGAGGATCGATCCAACAAAACTTGCGTCAAACAAATCAGACAAAATATAGTTACAGTTATAAACATGTCTACCGCAATaccttttaatttttacaagAATAGGTTCAACTGCTTTTACTGCTCCAAAGATTTTCTCGATTCGGAGTTGTTGAGGGAACATGCGGAGTTAGAACACCCGTTTTGCGATGTCAAAGCGAAATGTATCAGGAAATGTAGAGAATCCGTCGCTTGCGTCAAAATCGATGTTTCAAAACTCGCTTGCAAAGTCTGCTATGAGACACTAACCGATTTAGATCATCTGATTGATCATTTAGTAGTTAAACACAATGCGAATTACGATAAATCTATAACAACATGTCTGCAACCTTATAAGCTAGTCAAAGACAACATGGCCTGTCCACTTTGCACAGATGTAGTATTCAATTTCTTCGGAACGCTTCTAAAACACATGAATACGGAGCATACGAACAACAATATCATTTGCGTTTACTGCGGCCAAACGTTCCGTAGGGACCAAAACTTACGTGTTCACATTTGGCGGCATCACAGAGTTGGAAGGTTTAAATGTAACATTTGTGATGCCGAATGTAACATTCCGTCTCGATTATACATGCACATGGCTGAAGCACATGGCGTTAAGGCCGCTAAATGTCCGAAATGCCCCGAGTCATTCTCCACGCAGTATGAGAGGCAGAAGCATTTAATCAACGCCCATAATTCAGGTCACAAATGCTCTGTCTGCGGTAAACTTTTTACGAGAATGTCTTTCATGAATAACCATTTAAGAAGAACTCATATGAAAGAGAAGAAGTATGAATGTCAAGTTTGTTTTACGAGGTTCTTTAATACCGTGCTTTTGAAGAAGCATATGTTGAAGCATAGTGGACAGAAGAAATATTGTTGCGATATTTGTGGCGAACGGTTCTACTGGCGCAAAACTATGAAGACGCATAGAGATAGGCTGCATGCTCGACAGACtaatcctcctcctcctcctgcTCCAGTTATACCGACTATTCCAAGACATTTGGAAACAGAGGTGGCAAAGCACAGTGCTAGTTATCTAAGGAGGAAGAACCTACAAATATTGCTCAACAATACAACTTTAATACCCTTTAAATGGCGGGGAAAATACCTCTGCTTCTATTGCGGTGACGATACGGACACGCCCGAACGTCTCCGGAAACACACGAAAGGCCACGGACCTTGCAATGAAAGAGACAGAGCTATAAGACTAGTTAAATCAGCTGATGTAGAAATTAAAATTGATGTTTCTGACGTTACTTGCGAAATTTGTTCCGAAAGATTCCCGTTTTTGGATGAAATTATcgatcatttgatttttaaacacCAATTGCCTTACAAGAAAGATGTAGAGATGTTTTTGTCAGCGTATAGGCTGGTAGATCTTCAATGCCTTCTTTGCGATAAAGCTTTCAACTTTTTACGTAAATTAATCAGCCATGTGAATACTGCCCATCCAAATAACAGCTTTGAGTGTTCCGAATGTAAAAAGACGTTTAACAAAAAGAGAGATTTAGACTCGCACTTACGATTCCATCATAAGAAGCACCATTCTTGTACCAAATGTGATGACACGTTCCCAACCCACTCCGCGCTACAGATCCATAGGTCTAACGCTCATTCTTCAACATGTAACGTCTGCTTCCAAGTATTTTCATCAGACGGCAAGCGTTTAGCTCATTTTAAATCTGACCATGATACTGAACAAACCCAATGTGGATTTTGCAATAAAGTTCTAACAACAAAACAAGCTTTTATCAGACATGCTGCGAATTGCGAACATAAACCAAAAGAAGAAACCATTATAATTGATGACGAAGACAAAAAAGTATCTGttaaagaaataagaaaaaGTTTGGCAGCCATCTTTAACATGACAACTGCACTTCCTTTCAAATTCTTTATGAATAGGTTAAGATGTTTTTATTGTACTAGAGACTTTACGTCATGTGAGGACTTAAAAGAACATTCTTTGAGCGAACATCCACACTGCGATATATCCTTCAAATCTATGAGGTTGCGTAACAGATATGATGGCGTCCAAATCAAAGTGGACACTTCATCCTTATCCTGTAGACTATGCCAAATCACTTTGCAGGATCTGAACGACGTGATCGACCATTTAACGAAAGAACATAAAGTGAAATGCGACATGACTGTTGAGAGTAACTTGCAACCGTTCAAACTGATTAAAGATAAATATCCTTGTCCCATTTGCGGTGAAGTGTACAGATATTTTGGCGTCTTACTCAAACATGTTAGTGCGTCTCACAGTGGCAATAAACACATATGCATGTACTGCGGTAAAGCCTTCAGGACGGATCCTAACCTCAGAGCCCACGTGTCCAGGCGACACAAAACTGCTGACAACCACAAGTGTACGAGTTGCGATCTACAATTTCCTACAAATAATGGTCTGCCAGGACCGTACGAAGGCTGTACTTCTGAGCGACGACGGAAAAACTTGAAAATTCTGTTCAACCACACTACGATCATGCCTTTTAAATGGCGAGGCAAATATCTTTGCTTCTACTGCGGAAAAAACTATACAGAGTACACAGAATTTAGAAAACACACAAAATCTCACGGTCTATGCACCACTAAAGACTACTCCCTCAAACTAATCAAAGGAAATAATGTAGAAATTAAAATCGACGTCTCAGAAATCAATTGCGATATCTGCAATGAACCTTTCAGCAGATTCGAGGATATAATCGATCACCTGATCTCAAAACATAATATGgaatacaacaaaaatatcgatatacCCTTCCAAGAGTACCGATTAGTAGATTTTCGATGTTTGCACTGCGAAGAACAATTTTCTTACTTCGGATATTTAGTTAAACATGTCAACAACGTTCACCCGCAGAACTGTTTCATTTGTGACGATTGTGGGGTTACTTTCAACAAGAAGAGGGACTTGTCTATACATCTGAGGAATTATCATAGACAGGGTGGATATCCATGTGATTTGTGTTTAAAAAACTTCGAAACACGACTCGTTTTGCGGAGGCATCAAAATAATATGCATTTTAGGCATTGCAAAAGCTGTGGTTTACGATTTGCCTCTCTTTCTCTGCTGCAAAAACATGTACAAGTTGATCATCCCCAAAATGAGAGTAATATGAAGTGTAGTTACTGCTCCAAAGAATTCCACACTTCTTTAGGTTTAAAACAACATATAAGCAAATgcaaagtcaaaataatttctCAGGTCGAACCTCAAACTTCTTTCCTAAACGACAGTAACATAGAACCTAAGAAAAAGCAAAATATCCTGCAAATAAGACAAAATATACAGTGTGTACTAAACATGTCGACTGCTGTGCCTTTCAAATTCTTCTCCAAATATTCCTGTTTTTATTGCTCAAAGAAATTCGTAGAATTTGATGAGTTACGCCATCACACCAGCTTAGAACACCCTGTGTGCGATTTGAAGTCTAAATGCATGAAGAAATGTAAAGGAGAACGGATAGCTGTCAAAATCGACATCTCTGCTTTAGCTTGTAAAATATGTTGCCTCCCTATGCCTAACTTAGAAGATTTGGTTACCCATTTGATAGCAGAACATAAGGCGAATTATGATACGTCGATTTCCGGCTGTCTAGAGCCTTTTAAAGTTATAAAAGACAACATGCCCTGTCCTATATGCCCGGACACTGTCTTCCGATACTTCGGGATTTTACTTCGACACATGAACTCTGAACACAGCAACAATAATCGGATCTGTGATTTCTGCGGTCGAAGCTTCCGAAACGCAGCTAATCTCAATGTGCATATAACTTACGCGCATACAGGTTCTTGCGAATGTGACATTTGTGGAGTCAAATACAAGAATCAATGGTGCTTAGCGCGGCATAGAGCAAGGACACACGATGCAAAGGACCATAAATGTCCAAAATGCCCAGAGCAGTTCCAATCACAGTACCATAAACAAAAGCATTTGATAAAAATGCATAATGTCGGTCACAAATGTAGTTATTGCGGAAAAATGTTTACTAGAAATTCGTTCATGAAAGATCACGTAAGAAGGAcacatttgaaagaaaaaaatattccttGTTCGATTTGTAATGAGAAGTTTTTCGATAATTATCTTCTAAGAATGCATATGGTGAAACATGAGGGTGACAGGAAATTTAGTTGTACTGTTTGTGGAAAGGCGTTTTTGAGACGAAGCAATTTGAGCTCGCATATGGAGATGCATAAAAAATATGGGCATGTGCAGTTGCAGATTTAa
Protein Sequence: MVWFARKTGKKPRKSKDNKESSSMRRRRNLQILFNNTSIIPFKWRGKYLCFFCSKDVAEYNELRNHTKEHGNCSINDHSLKVLKGGKNMEIKIDISFITCEVCTETLATFDEIINHLFDKHELEYDKEVEMAIEEYKLADLSCTGCSEKFTYFGYLVSHVNNIHPKNCHVCEKCNQKFNKTRDLFSHMKNYHREGGYQCEMCPQTFSSLNILRKHRNNRHLTRCNICNLKLPSAALRQKHLELEHPDDGSLQCDACLKEFHTKQGLKMHSRKCKGEELFGIAIKEEHVAMDLDLNYEDRSNKTCVKQIRQNIVTVINMSTAIPFNFYKNRFNCFYCSKDFLDSELLREHAELEHPFCDVKAKCIRKCRESVACVKIDVSKLACKVCYETLTDLDHLIDHLVVKHNANYDKSITTCLQPYKLVKDNMACPLCTDVVFNFFGTLLKHMNTEHTNNNIICVYCGQTFRRDQNLRVHIWRHHRVGRFKCNICDAECNIPSRLYMHMAEAHGVKAAKCPKCPESFSTQYERQKHLINAHNSGHKCSVCGKLFTRMSFMNNHLRRTHMKEKKYECQVCFTRFFNTVLLKKHMLKHSGQKKYCCDICGERFYWRKTMKTHRDRLHARQTNPPPPPAPVIPTIPRHLETEVAKHSASYLRRKNLQILLNNTTLIPFKWRGKYLCFYCGDDTDTPERLRKHTKGHGPCNERDRAIRLVKSADVEIKIDVSDVTCEICSERFPFLDEIIDHLIFKHQLPYKKDVEMFLSAYRLVDLQCLLCDKAFNFLRKLISHVNTAHPNNSFECSECKKTFNKKRDLDSHLRFHHKKHHSCTKCDDTFPTHSALQIHRSNAHSSTCNVCFQVFSSDGKRLAHFKSDHDTEQTQCGFCNKVLTTKQAFIRHAANCEHKPKEETIIIDDEDKKVSVKEIRKSLAAIFNMTTALPFKFFMNRLRCFYCTRDFTSCEDLKEHSLSEHPHCDISFKSMRLRNRYDGVQIKVDTSSLSCRLCQITLQDLNDVIDHLTKEHKVKCDMTVESNLQPFKLIKDKYPCPICGEVYRYFGVLLKHVSASHSGNKHICMYCGKAFRTDPNLRAHVSRRHKTADNHKCTSCDLQFPTNNGLPGPYEGCTSERRRKNLKILFNHTTIMPFKWRGKYLCFYCGKNYTEYTEFRKHTKSHGLCTTKDYSLKLIKGNNVEIKIDVSEINCDICNEPFSRFEDIIDHLISKHNMEYNKNIDIPFQEYRLVDFRCLHCEEQFSYFGYLVKHVNNVHPQNCFICDDCGVTFNKKRDLSIHLRNYHRQGGYPCDLCLKNFETRLVLRRHQNNMHFRHCKSCGLRFASLSLLQKHVQVDHPQNESNMKCSYCSKEFHTSLGLKQHISKCKVKIISQVEPQTSFLNDSNIEPKKKQNILQIRQNIQCVLNMSTAVPFKFFSKYSCFYCSKKFVEFDELRHHTSLEHPVCDLKSKCMKKCKGERIAVKIDISALACKICCLPMPNLEDLVTHLIAEHKANYDTSISGCLEPFKVIKDNMPCPICPDTVFRYFGILLRHMNSEHSNNNRICDFCGRSFRNAANLNVHITYAHTGSCECDICGVKYKNQWCLARHRARTHDAKDHKCPKCPEQFQSQYHKQKHLIKMHNVGHKCSYCGKMFTRNSFMKDHVRRTHLKEKNIPCSICNEKFFDNYLLRMHMVKHEGDRKFSCTVCGKAFLRRSNLSSHMEMHKKYGHVQLQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00449478;
90% Identity: iTF_01026572;
80% Identity: -