Basic Information

Insect: Mystacides longicornis
Gene Symbol: L
Assembly: GCA_963576905.1
Location: OY756426.1:22325241-22337400[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 2.6e-05 0.0026 19.4 0.2 1 23 10 32 10 32 0.98

2 21 1.4e-05 0.0014 20.2 0.3 1 23 53 76 53 76 0.96

3 21 0.49 50 5.9 1.1 3 23 113 135 111 135 0.85

4 21 0.011 1.1 11.1 1.0 1 23 171 194 171 194 0.96

5 21 0.093 9.4 8.1 0.0 2 23 204 226 203 226 0.93

6 21 0.11 11 7.9 0.1 3 23 264 284 263 284 0.98

7 21 0.0006 0.061 15.0 0.0 2 23 292 313 291 313 0.92

8 21 0.0011 0.11 14.2 0.1 3 23 323 344 321 344 0.94

9 21 0.0084 0.85 11.4 0.2 1 23 349 372 349 372 0.92

10 21 0.052 5.2 9.0 0.8 1 23 379 405 379 405 0.94

11 21 7 7e+02 2.3 0.3 2 22 419 439 418 441 0.66

12 21 0.0057 0.58 12.0 2.8 1 23 444 466 444 467 0.96

13 21 1.6 1.6e+02 4.3 0.7 2 23 504 527 503 528 0.87

14 21 0.00043 0.044 15.5 1.8 2 23 541 562 540 562 0.96

15 21 0.0015 0.15 13.8 0.1 1 23 572 594 572 594 0.98

16 21 1.7 1.7e+02 4.2 3.8 3 23 603 623 602 623 0.96

17 21 0.0013 0.13 14.0 0.5 2 23 726 748 726 748 0.94

18 21 0.34 35 6.4 0.0 1 23 752 774 752 774 0.96

19 21 0.28 29 6.6 0.1 2 23 782 803 781 803 0.95

20 21 0.00082 0.083 14.6 0.1 1 23 811 833 811 833 0.97

21 21 0.16 16 7.4 1.3 1 23 840 862 840 862 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	2.6e-05	0.0026	19.4	0.2	1	23	10	32	10	32	0.98
2	21	1.4e-05	0.0014	20.2	0.3	1	23	53	76	53	76	0.96
3	21	0.49	50	5.9	1.1	3	23	113	135	111	135	0.85
4	21	0.011	1.1	11.1	1.0	1	23	171	194	171	194	0.96
5	21	0.093	9.4	8.1	0.0	2	23	204	226	203	226	0.93
6	21	0.11	11	7.9	0.1	3	23	264	284	263	284	0.98
7	21	0.0006	0.061	15.0	0.0	2	23	292	313	291	313	0.92
8	21	0.0011	0.11	14.2	0.1	3	23	323	344	321	344	0.94
9	21	0.0084	0.85	11.4	0.2	1	23	349	372	349	372	0.92
10	21	0.052	5.2	9.0	0.8	1	23	379	405	379	405	0.94
11	21	7	7e+02	2.3	0.3	2	22	419	439	418	441	0.66
12	21	0.0057	0.58	12.0	2.8	1	23	444	466	444	467	0.96
13	21	1.6	1.6e+02	4.3	0.7	2	23	504	527	503	528	0.87
14	21	0.00043	0.044	15.5	1.8	2	23	541	562	540	562	0.96
15	21	0.0015	0.15	13.8	0.1	1	23	572	594	572	594	0.98
16	21	1.7	1.7e+02	4.2	3.8	3	23	603	623	602	623	0.96
17	21	0.0013	0.13	14.0	0.5	2	23	726	748	726	748	0.94
18	21	0.34	35	6.4	0.0	1	23	752	774	752	774	0.96
19	21	0.28	29	6.6	0.1	2	23	782	803	781	803	0.95
20	21	0.00082	0.083	14.6	0.1	1	23	811	833	811	833	0.97
21	21	0.16	16	7.4	1.3	1	23	840	862	840	862	0.94

Sequence Information

Coding Sequence: ATGAAGACGCACGACAACCAAAAACCATTCCAATGCACCGTGTGCAACAGGGGCTACAACACTGCAGCGGCCCTGACCTCACACATGCAGAACCATAAGAGAGCAGCTGGAAATGGGGACGGGTCTCCAGGATCCCATCATGGACTGGGACGAGGTTACAGGTGCCTGCAGTGCGGGGAGAGGTTCCGAAGACCAGATCTGCTtcagGCTCACACCACTTCAGTACATTCTGCAGAAATAAGCACAAGTAACAGTCCACGCGGAGCATCCACCCCCACTACGCCTTCTCCAAGACCTCGCTCTTCCTTGCATTCAGCGTTACCACCAAAATTGGCCTGCATGTACTGTACCAAGGACACCTTCACAACCATGGAACAACTTCAAGCCCACATTCACACCATGCACGGAGCTCTACTCGGGGCGGACCTCCCTCTGTTGCCTCCTCCACTCCCCCCACCGCCGCACACTGATCAAAACGGATTGACTCCTGTGCATTCTCCTGTCTTGCCTTACAGCTGTGACTCTTGCACAATGCGTTTTCCATCTTCTTCTGTTCTTCACCAACACATCACATCGGCTCATTCCAAATTAAGTCCTAGATCACCGCTGTCGTGCAGTGTTTGTTCCATTCCTTTTTCTTCTACCGCTGGACTAGCTGAACACTTCTTGATGGTACATGGAAACCCTCCTGAACAGCTCCGTCCAACTGATCTTAGCAAGAAGAATTTCGACCGTCCAAACAAAAGACCTAGAAGTGGAGAAGACACGTTGAGTGCCAATACATTGTTATGTAATCAGTGTGGTGCTGCTCTACCAGATTTCGAATCTTTCAGAATTCATTTGCGAGCCCATCTAGAAGGAGGTTCATTTTTGAGTTGTTCAACTTGCGGAGCTAGGTTCACGGATCCAGGTGCTTTGGAACGCCACGCGGCGGCTCATTTGCTTTCTTTAGGAGCCGAATTCGGATGTCCGAGTTGTTCCAGAGCTTTCCCAAAGCCGGATGAATTACAAAAACACCTCATGGATCTCCATGCGCACCATTTGTATCGCTGCACTATCTGTAAAGAAATGTTTGACTCCAAAGTTGCTATTCAGGTTCACTTTGCTGTTAAGCACAGCCACGAATGTAAAGTATACAAATGCACGGCTTGTAACACATCCTCGGCCACTTTCCGTAGCGAGTCGGACTTTACCATTCACGTCAGAACTCAACATCCAACTACACAGAGCAGCCCCGTGGTAACGCCAGCGCTGAGATGCCCTTACTGCAGAGCCACTTGCGGGACAGAGTTGGAACTGCAATTTCATTTGGCTGCTCACGCTGAGCAGTACAGATGTCCTCTATGTAGAGAAGGATTCCACGTCGAATTTCTTTTAGACAGACATATGCAAACACATCATCAACACCAGGGAGTCAATGGCGGTAGtccaaaacaaaaacaatcccCAAGTCGTTTAAGTATCAAAAATTTAACGACAGAAAACAACAATACCAAAAAAGACTCCACCAGTTGTGACATATGTGATCGAAGTGATTTCCAATCTGAGAGTGAACTGGCCGCTCATAGAAAACTATCTCATCATGTTAAAGGGACTGGTAAAAATGGAGCTGTGAGCTTAAACTGCGCGTACTGCAGTGAGAACTGTAAAACTAGGGCTGAACTGGAAAACCACATGAAAACACATTCTCAGAGTGGCGGTACTGGTGGAAAACATAAATGTCTGATCTGCGATGAAGTTTTTCCATCGTCAGCAGTTCTTGCAGAGCACAAGCTGACACATTGTAAAGTGTTGACAGGAAATAACTGCACCCATTGTAAAACAACTATAGCAAACGAAGAACAATTTTTCGTCCATCTTTCGCATCATTCCAATAACAATAACAGCCCACCGAATAGTTCTCAGTCACCCGCACCGCTCAACCTCCCAGCGCCTTGTGTTATTTGCAGACAGACCTTGATGTCTGACGTAGAAGCTCGCATACACGCCAGATTTCATTTGAAGAATTCTGGACTATCGGCAGAATCGTATCAATGCGCTCTTTGCTTGAAATCTTGCAGTCTCCGTGATGTCATTCCAACTGGAGCCGAAATCAACAACGGAATTCCTTCCACTTACGTCTGTAGGGATTGTTATAGACACCACAGTGGAACTACAGAAACATCAGATGAACGTCGCTGTTCTGAATGTCACCTTAAGTTTGAATCCAACGTGGCTTTAGAAAACCACATGGAGGAGGTTCACAGAAAAACTTATACCTGTATCGAATGCCAAGCGGCTTTTGAAACTGAGCAAGAAGTGAGAGCTCATGTCCAGTCTCATATAACGGGATCTGGATCTCTTGAATGTAGACTTTGTCGTCGATCTTTGGGGTCTCCTTTACAACTCCAAGCTCATCTAATCGAACATACTTTTGCAGGATGTGGAGCATTTACGTGCTATTTGTGTTCAGCAGTTTTCACAGGAGCCTCTGGACTCCAGCAGCACATGCTGGCACACGGACTAGCCTCCCGCCCTTATGACTGCACGAGATGCGGTTTGAAATTCTTCTTCCGGGCTGAGTTGGACAATCATAGCTACAGTCATTTAGAAGATGATGTCAGGATAAAATTATCAGACGCAGTCGAATCATTGAAGCACCCCTTCTTTTTAAGCCAAAATGGTTTCCACAATATCGAAAGTTTGGCTTCGTGCTATTCTACCTCCATTTCTCCCtctgtgaaaaaaattaaaacatctgATAGTCCAGTAGTGTTTAAAAATACTGAACCAGTTACCGATTTTACGAATATAATGAGTTTGCAAAATTATAAACGGCAGCAAGATAtcgaaaaagaaaacaacaaagCAGAAGTTAAATCCGATAGCCCAGTGGTCAAACAAGAAGTAGAAGAGAAGGATGAGTATATAGAAGTAAGCTCTCCTGTTTCCGCGCCGATCAAAGAAGGAGAACACAAAGGAGATGAACCTGTGGAGAATACGGTAGCAGACACCGTTGAAAGCGCGCCTTTGTTGAGTCCTAAAAAGGAGATAGTTGAAACATAA
Protein Sequence: MKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKRAAGNGDGSPGSHHGLGRGYRCLQCGERFRRPDLLQAHTTSVHSAEISTSNSPRGASTPTTPSPRPRSSLHSALPPKLACMYCTKDTFTTMEQLQAHIHTMHGALLGADLPLLPPPLPPPPHTDQNGLTPVHSPVLPYSCDSCTMRFPSSSVLHQHITSAHSKLSPRSPLSCSVCSIPFSSTAGLAEHFLMVHGNPPEQLRPTDLSKKNFDRPNKRPRSGEDTLSANTLLCNQCGAALPDFESFRIHLRAHLEGGSFLSCSTCGARFTDPGALERHAAAHLLSLGAEFGCPSCSRAFPKPDELQKHLMDLHAHHLYRCTICKEMFDSKVAIQVHFAVKHSHECKVYKCTACNTSSATFRSESDFTIHVRTQHPTTQSSPVVTPALRCPYCRATCGTELELQFHLAAHAEQYRCPLCREGFHVEFLLDRHMQTHHQHQGVNGGSPKQKQSPSRLSIKNLTTENNNTKKDSTSCDICDRSDFQSESELAAHRKLSHHVKGTGKNGAVSLNCAYCSENCKTRAELENHMKTHSQSGGTGGKHKCLICDEVFPSSAVLAEHKLTHCKVLTGNNCTHCKTTIANEEQFFVHLSHHSNNNNSPPNSSQSPAPLNLPAPCVICRQTLMSDVEARIHARFHLKNSGLSAESYQCALCLKSCSLRDVIPTGAEINNGIPSTYVCRDCYRHHSGTTETSDERRCSECHLKFESNVALENHMEEVHRKTYTCIECQAAFETEQEVRAHVQSHITGSGSLECRLCRRSLGSPLQLQAHLIEHTFAGCGAFTCYLCSAVFTGASGLQQHMLAHGLASRPYDCTRCGLKFFFRAELDNHSYSHLEDDVRIKLSDAVESLKHPFFLSQNGFHNIESLASCYSTSISPSVKKIKTSDSPVVFKNTEPVTDFTNIMSLQNYKRQQDIEKENNKAEVKSDSPVVKQEVEEKDEYIEVSSPVSAPIKEGEHKGDEPVENTVADTVESAPLLSPKKEIVET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00299338; iTF_00179671;
90% Identity: -
80% Identity: -