Basic Information

Insect: Athripsodes cinereus
Gene Symbol: L
Assembly: GCA_947579605.1
Location: OX388311.1:21268315-21276927[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.21 23 7.1 5.7 1 23 3 25 3 25 0.97

2 23 1.8e-06 0.0002 23.1 4.1 1 23 31 53 31 53 0.99

3 23 2.8e-05 0.0031 19.3 0.2 1 23 59 81 59 81 0.98

4 23 1.6e-05 0.0017 20.1 0.3 1 23 102 125 102 125 0.96

5 23 2.2 2.4e+02 3.9 1.6 2 23 160 183 159 183 0.84

6 23 0.0016 0.18 13.8 0.8 1 23 219 242 219 242 0.96

7 23 0.038 4.2 9.4 0.0 2 23 252 274 251 274 0.93

8 23 0.12 13 7.9 0.1 3 23 312 332 311 332 0.98

9 23 0.00049 0.054 15.4 0.0 2 23 340 361 339 361 0.92

10 23 0.0012 0.13 14.1 0.1 3 23 371 392 369 392 0.94

11 23 0.017 1.8 10.6 0.2 1 23 397 420 397 420 0.92

12 23 0.075 8.2 8.5 0.4 1 23 427 453 427 453 0.95

13 23 6.1 6.7e+02 2.5 0.5 2 23 467 488 467 488 0.84

14 23 0.029 3.2 9.8 2.7 1 23 492 514 492 515 0.96

15 23 7.1 7.8e+02 2.3 0.5 2 23 552 575 551 576 0.83

16 23 0.00035 0.038 15.9 1.7 2 23 589 610 588 610 0.97

17 23 0.0026 0.29 13.1 0.1 1 23 620 642 620 642 0.98

18 23 0.45 49 6.1 2.6 3 23 651 671 650 671 0.96

19 23 0.0019 0.21 13.5 0.6 2 23 774 796 774 796 0.94

20 23 0.23 26 7.0 0.0 1 23 800 822 800 822 0.97

21 23 0.31 34 6.6 0.1 2 23 830 851 829 851 0.95

22 23 0.0081 0.89 11.6 0.0 1 23 859 881 859 881 0.97

23 23 0.089 9.8 8.3 1.4 1 23 888 910 888 910 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.21	23	7.1	5.7	1	23	3	25	3	25	0.97
2	23	1.8e-06	0.0002	23.1	4.1	1	23	31	53	31	53	0.99
3	23	2.8e-05	0.0031	19.3	0.2	1	23	59	81	59	81	0.98
4	23	1.6e-05	0.0017	20.1	0.3	1	23	102	125	102	125	0.96
5	23	2.2	2.4e+02	3.9	1.6	2	23	160	183	159	183	0.84
6	23	0.0016	0.18	13.8	0.8	1	23	219	242	219	242	0.96
7	23	0.038	4.2	9.4	0.0	2	23	252	274	251	274	0.93
8	23	0.12	13	7.9	0.1	3	23	312	332	311	332	0.98
9	23	0.00049	0.054	15.4	0.0	2	23	340	361	339	361	0.92
10	23	0.0012	0.13	14.1	0.1	3	23	371	392	369	392	0.94
11	23	0.017	1.8	10.6	0.2	1	23	397	420	397	420	0.92
12	23	0.075	8.2	8.5	0.4	1	23	427	453	427	453	0.95
13	23	6.1	6.7e+02	2.5	0.5	2	23	467	488	467	488	0.84
14	23	0.029	3.2	9.8	2.7	1	23	492	514	492	515	0.96
15	23	7.1	7.8e+02	2.3	0.5	2	23	552	575	551	576	0.83
16	23	0.00035	0.038	15.9	1.7	2	23	589	610	588	610	0.97
17	23	0.0026	0.29	13.1	0.1	1	23	620	642	620	642	0.98
18	23	0.45	49	6.1	2.6	3	23	651	671	650	671	0.96
19	23	0.0019	0.21	13.5	0.6	2	23	774	796	774	796	0.94
20	23	0.23	26	7.0	0.0	1	23	800	822	800	822	0.97
21	23	0.31	34	6.6	0.1	2	23	830	851	829	851	0.95
22	23	0.0081	0.89	11.6	0.0	1	23	859	881	859	881	0.97
23	23	0.089	9.8	8.3	1.4	1	23	888	910	888	910	0.96

Sequence Information

Coding Sequence: ATGCCGTTTCGTTGCGACTACTGTTCGAGACTTTTCAAGCACAAGAGATCTAGGGATCGTCATGTCAAACTGCATACGGGTGACCGCAAGTACCGGTGCTCACACTGCGAAGCCGCCTTTTCCAGGAGTGATCATTTGAAAATTCATATGAAGACTCACGATAATCAAAAGCCATTCCAGTGTACCGTCTGTAATAGAGGATACAATACTGCGGCTGCCCTCACGTCGCACATGCAAAATCACAAGCGAGCTGCTGGCAATGGAGATGGATCTCCTGGATCTCACCATGGATTAGGAAGAGGATATAGATGTTTGCAATGTGGGGAGAGGTTCAGAAGACCAGATTTACTGCAGGCTCATACAACTTCTGTTCACTCAACTGAGTTGAGCACGACAAGTAGTCCTCGAGGAACATCTACACCAACAACACCTTCTCCCAGGCCACGCTCTTCCGCTCATTCTTTACCACCCAAATTAACATGCATGTATTGCACAAGAGACACATTCACAACAATGGAACAACTTCAAGCGCACGTCCATACAATGCATGGAGCTCTTCTTAGTGCAGATCTTCCATTGCTTCCACCGCCACTTCCTCCTCCTCCACATACAGATCATAATGGAATAACACCGACAAATTCTCCAGTACTTCCATACAACTGTGAATCTTGTACAATGCGTTTTCCGTCGTCATCAGCTCTTCATCAACATATTTCATCTGCTCATTCAAAACTCAGTCCTCGTTCTCCCCTGTCTTGCAATATTTGTTCTATTCCCTTTTCTTCAACGGCCGGATTAGCTGAACATTTCTTAATGGCACACGGAAGTCCACCGGAACAACTCCGTCCAACAGATCTTAGTAAAAAATCATTCGACCGTCCGATCAAAAGACCAAGAAGTGGTGAGGATACTCTTGGAGCAGGAACTCTTCTTTGTAATCAGTGTGGAGCAGCACTACCAGATTTCGAATCCTTTAGGATACATTTGCGAGCTCATTTAGAAGGAGGAGCTTGTCTTACCTGTTCCACTTGTGGAGCACGTTTTACCGATCCAACTGCCCTGGAACGTCATGCTGCAGCACATCTTCTTTCATTGGGTGCTGAATTTGGTTGTCCAAGCTGCTCAAGAGCTTTTCCAAAACCAGATGAACTACAAAAACACTTGATGGATCTTCATGCTCATCATCTATATCGTTGTACTATATGTAAAGAAATTTTCGACTCAAAAGTTGCAATACAGGTTCATTTTGCTGTCAAACACAGCCACGAATGTAAAGTATATAAATGCACAGCATGCAACTTACCTTCTGCTACATTCCGAAGCGAATCAGAGTTTACTTTACATGTGCGAACACAACATGCTGGAGGACAAAGTGCTCCAGCAGTTGCACCAACTGCGAGATGTCCATACTGTAGAGCTACGTGTGCTACAGAATTAGAATTACAATTCCACCTAGCAGCACATGCCGAGCAATACAGATGTCCACTTTGTCGAGAAGGTTTTCATGTGGAATTCCTTCTGGACAGGCACATGCAGCAGCATCATCAACACCAGGGTATCAACGGCGGAAGTCCAAAGCCCAAACAGTCTCCTAGTCGATTAAGCGTGAAGGCATTAACGACGGAAAATAATAATACTAAAAAAGAAGTAACAAGTTGTGATATATGCGACAGAAACGATTTTCAGTCGGAAGGAGAACTTGCTGCTCATCGAAAATTATCTCATCATGTCAAAGGAGCTGGAAAAAATGGCGCTGTAAGCCTCAGTTGTGCATACTGTAGCGAGAACTGCAAAACTAGAGCCGAACTTGAAAATCATATGAAAACTCACTCTCAGAGTGGAGCTACTGGCGGTAAACATAAATGTCTCATTTGTGATGAAGTTTTTCCTTCTGCTGCAGTACTTGCAGAACATAAATTAACTCATTGTAAAGTGTTAGGGGGAAATAACTGTACTCATTGTAAAACAACAATTGCCAATGAAGACCAGTTCTTTAGCCATCTTTCTCAGCATTCTAATAATAATAACAACCCACCAAATAGTCCACATTCTCCTGCTCCTTTAAGTCTTCCAACGGCTTGTATTATTTGCAGACAAACTTTGATGTCAGATGTTGAAGCACGAATACATGCTAGATTTCATCTTAAAAATTCTGGCTTATCATCGGAATCATACCAATGCGCTTTGTGTCTTAAGTCTTATAGCCTACGTGATGTGATACCCACGGGAGCAGAAATTAATAATGGAATACCGACAACACACGTGTGTAGAGAATGCTATAGACAACATAGTGGAACTGCGGAAACATCTGAGGAGCGAAGGTGCAGTGAATGTCATCTTAAATTTGAATCTAATACTACATTGGAGGCACACATTGAAGAAGTTCACAGAAAAACATACACTTGTATTGAATGCCAGGCTGCATTTGAATCTGAACAAGAAGTAAGAGCTCATGTCCAAACACATATAACGGGAAGTGGTTCATTAGAGTGTAGACTTTGTCGCCGATCTCTTGGATCACCTTTACAACTCCAAGCTCATTTGATAGAGCATACTTTTGCAGGATGCGGAGCTTTTACGTGTTACTTGTGCTCTGCAGTTTTTACTGGAGCACCTGGTTTACAACAACATATGTTAGCTCATGGGTTAGCAGCTCGACCTTATGATTGTACCAGATGTGGTTTGAAATTCTTCTTTAGGGCTGAATTGGATAATCACAGCTACACGCATCTCGAGGATGATGTGAGGATTAAGTTATCCGATGCAGTTGATACTTTAAAACATCCATACTTCTTAGGTCAAAATGGCTTCCATAATATAGAAAGCTTGGCATCTTGTTACTCTACACTTTCACCATCTGCCAAAAAGGTTAAAACATCTGATAGTCCAGTATTGTTTAAACACACAGAGTCTCCCTCGGACTTCAGTAATATTATGACTCTACAGAATTACAAACGACAGCAAGATATGGATAAAGAAAACAACGTCAAAGATATTAAAAAAGATGACACTGTTGTCAAGCAGGAAATTGCAGAAAAGGATGAATATATTGAAGTTAGTTCACCTGTAGCGGTGACAAAAGAACAAGAAAATAAAACATCAGCTGAAGATGCTAGTGCTAACACCGATGACACTCCACTTCTAAGTCCTAAAAAAGAAGTTATCGATACTTGA
Protein Sequence: MPFRCDYCSRLFKHKRSRDRHVKLHTGDRKYRCSHCEAAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKRAAGNGDGSPGSHHGLGRGYRCLQCGERFRRPDLLQAHTTSVHSTELSTTSSPRGTSTPTTPSPRPRSSAHSLPPKLTCMYCTRDTFTTMEQLQAHVHTMHGALLSADLPLLPPPLPPPPHTDHNGITPTNSPVLPYNCESCTMRFPSSSALHQHISSAHSKLSPRSPLSCNICSIPFSSTAGLAEHFLMAHGSPPEQLRPTDLSKKSFDRPIKRPRSGEDTLGAGTLLCNQCGAALPDFESFRIHLRAHLEGGACLTCSTCGARFTDPTALERHAAAHLLSLGAEFGCPSCSRAFPKPDELQKHLMDLHAHHLYRCTICKEIFDSKVAIQVHFAVKHSHECKVYKCTACNLPSATFRSESEFTLHVRTQHAGGQSAPAVAPTARCPYCRATCATELELQFHLAAHAEQYRCPLCREGFHVEFLLDRHMQQHHQHQGINGGSPKPKQSPSRLSVKALTTENNNTKKEVTSCDICDRNDFQSEGELAAHRKLSHHVKGAGKNGAVSLSCAYCSENCKTRAELENHMKTHSQSGATGGKHKCLICDEVFPSAAVLAEHKLTHCKVLGGNNCTHCKTTIANEDQFFSHLSQHSNNNNNPPNSPHSPAPLSLPTACIICRQTLMSDVEARIHARFHLKNSGLSSESYQCALCLKSYSLRDVIPTGAEINNGIPTTHVCRECYRQHSGTAETSEERRCSECHLKFESNTTLEAHIEEVHRKTYTCIECQAAFESEQEVRAHVQTHITGSGSLECRLCRRSLGSPLQLQAHLIEHTFAGCGAFTCYLCSAVFTGAPGLQQHMLAHGLAARPYDCTRCGLKFFFRAELDNHSYTHLEDDVRIKLSDAVDTLKHPYFLGQNGFHNIESLASCYSTLSPSAKKVKTSDSPVLFKHTESPSDFSNIMTLQNYKRQQDMDKENNVKDIKKDDTVVKQEIAEKDEYIEVSSPVAVTKEQENKTSAEDASANTDDTPLLSPKKEVIDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01025261;
90% Identity: iTF_00299338;
80% Identity: -