Basic Information

Insect: Ceraclea dissimilis
Gene Symbol: L
Assembly: GCA_963576895.1
Location: OY756362.1:7781875-7790555[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.24 11 7.1 5.7 1 23 3 25 3 25 0.97

2 23 2.1e-06 9.2e-05 23.1 4.1 1 23 31 53 31 53 0.99

3 23 3.3e-05 0.0015 19.3 0.2 1 23 59 81 59 81 0.98

4 23 9.8e-05 0.0044 17.8 0.1 1 20 102 121 102 122 0.96

5 23 0.82 37 5.4 1.6 2 23 161 184 160 184 0.84

6 23 0.0021 0.095 13.6 0.9 1 23 220 243 220 243 0.96

7 23 0.044 2 9.4 0.0 2 23 253 275 252 275 0.93

8 23 0.14 6.3 7.9 0.1 3 23 313 333 312 333 0.98

9 23 0.00081 0.036 14.9 0.0 2 23 341 362 340 362 0.92

10 23 0.0014 0.063 14.1 0.1 3 23 372 393 370 393 0.94

11 23 0.019 0.87 10.6 0.2 1 23 398 421 398 421 0.92

12 23 0.53 24 6.0 0.7 1 23 428 454 424 454 0.92

13 23 7 3.2e+02 2.5 0.5 2 23 468 489 468 489 0.84

14 23 0.033 1.5 9.8 2.7 1 23 493 515 493 516 0.96

15 23 5.7 2.5e+02 2.8 0.5 2 23 553 576 552 577 0.83

16 23 0.0004 0.018 15.9 1.7 2 23 590 611 589 611 0.97

17 23 0.028 1.2 10.1 0.1 1 23 621 643 621 643 0.96

18 23 3.1 1.4e+02 3.6 1.9 3 23 652 672 651 672 0.96

19 23 0.0027 0.12 13.2 0.3 2 23 775 797 775 797 0.94

20 23 0.27 12 7.0 0.0 1 23 801 823 801 823 0.97

21 23 0.36 16 6.6 0.1 2 23 831 852 830 852 0.95

22 23 0.001 0.047 14.5 0.1 1 23 860 882 860 882 0.97

23 23 0.1 4.7 8.3 1.4 1 23 889 911 889 911 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.24	11	7.1	5.7	1	23	3	25	3	25	0.97
2	23	2.1e-06	9.2e-05	23.1	4.1	1	23	31	53	31	53	0.99
3	23	3.3e-05	0.0015	19.3	0.2	1	23	59	81	59	81	0.98
4	23	9.8e-05	0.0044	17.8	0.1	1	20	102	121	102	122	0.96
5	23	0.82	37	5.4	1.6	2	23	161	184	160	184	0.84
6	23	0.0021	0.095	13.6	0.9	1	23	220	243	220	243	0.96
7	23	0.044	2	9.4	0.0	2	23	253	275	252	275	0.93
8	23	0.14	6.3	7.9	0.1	3	23	313	333	312	333	0.98
9	23	0.00081	0.036	14.9	0.0	2	23	341	362	340	362	0.92
10	23	0.0014	0.063	14.1	0.1	3	23	372	393	370	393	0.94
11	23	0.019	0.87	10.6	0.2	1	23	398	421	398	421	0.92
12	23	0.53	24	6.0	0.7	1	23	428	454	424	454	0.92
13	23	7	3.2e+02	2.5	0.5	2	23	468	489	468	489	0.84
14	23	0.033	1.5	9.8	2.7	1	23	493	515	493	516	0.96
15	23	5.7	2.5e+02	2.8	0.5	2	23	553	576	552	577	0.83
16	23	0.0004	0.018	15.9	1.7	2	23	590	611	589	611	0.97
17	23	0.028	1.2	10.1	0.1	1	23	621	643	621	643	0.96
18	23	3.1	1.4e+02	3.6	1.9	3	23	652	672	651	672	0.96
19	23	0.0027	0.12	13.2	0.3	2	23	775	797	775	797	0.94
20	23	0.27	12	7.0	0.0	1	23	801	823	801	823	0.97
21	23	0.36	16	6.6	0.1	2	23	831	852	830	852	0.95
22	23	0.001	0.047	14.5	0.1	1	23	860	882	860	882	0.97
23	23	0.1	4.7	8.3	1.4	1	23	889	911	889	911	0.96

Sequence Information

Coding Sequence: ATGCCTTTCCGATGTGACTACTGTTCCAGATTGTTCAAGCACAAGAGATCTAGGGACCGCCATGTCAAACTGCACACAGGAGACCGCAAGTACAGATGCTCACATTGCGAAGCTGCGTTCTCCAGGAGTGACCATCTGAAAATTCATATGAAGACTCACGATAACCAGAAGCCATTCCAATGTACAGTCTGTAACAGAGGATATAATACAGCGGCTGCTCTTACTTCACACATGCAGAATCACAAGCGAACTGCTGGAAATGGAGATGGGTCTCCTGCTGCTCATCATGGACTTGGCAGAGGGTACAGGTGTTTACAGTGTGGAGAAAGGTTTCGAAGACCGGATTTGCTTCAGGCTCATACAAGTTGTGTCCACTCGGGAGAAATGAGTACAACAAGTAGTCCACGTGGGACATCAACTCCAACTACACCATCCCCTAGACCCCGTTCATCTATCCATTCTTCACTGCCACCAAAGTTAACTTGCATGTACTGCACAAGGGATACCTTCACTACTATGGAGCAGCTTCAAGCACATATTCACACCATGCATGGCGCTCTACTCAGTGCAGATCTTCCATTATTACCGCCACCTCTTCCCCCTCCTCCACATTCAGATCAAAATGGTCTACCAACAGCACACTCCCCTGCTCTTCCATACAACTGTGAATCTTGTACAATGCGCTTTCCATCATCCTCAACTCTTCATCAACATATTGCATCCGCTCATTCAAAATTAAGTCCTCGTTCACCTCTGTCTTGCAACATTTGCTCTATCCCTTTttcttccactgctggattagCGGAACACTTTTTAATGGCACATGGAAGTCCACCGGAACAACTCCGTCCAACAGACCTTAGTAAGAAGTCATTTGACCGTCCACTTAAAAGGCCTAGAAGTGACGAAGATACTCTTGGAGCAGGAACTCTTCTTTGCAATCAATGTGGAGCGGCTCTTCCTGATTTTGAATCGTTTAGAATTCACCTGCGCGCTCACTTAGAGGGAGGAGCATGCTTGTCTTGTTCTACTTGTGGAGCTCGTTTTACCGATCCAACTGCTTTAGAACGGCATGCAGCGGCACATCTTCTTTCTTTGGGAGCTGAGTTTGGGTGTCCAAGTTGTTCGCGAGCTTTTCCAAAACCAGACGAACTGCAGAAACATTTGATGGACCTCCATGCCCACCATTTGTACCGTTGTACAATTTGTAAAGAAATATTTGACTCCAAAGTTGCTATACAGGTTCATTTTGCTGTAAAACACAGTCACGAATGTAAAATCTACAAATGTACAGCATGTACATCACCGTCTGCTACGTTTCGTAGTGAGGCTGAATTTACAGTACACGTGAGAACACAACACGCAGGAGGTCAAAGTGCTCCTGTAGTTGCTGCAGCCGCCAGATGTCCATATTGTAGAGCCACATGTGCAACAGAACTCGAACTGCAATTCCATTTAGCAGCGCATGCCGAGCAATATAGATGTCCATTATGCAGAGAAGGCTTCCACGTGGAATTTCTACTTGACAGACATATGCAGCAACATCACCAACATCAGAGTCTTAATGGTGGAAGTCCGAAACCTAAACAATCTCCAAGTCGAATAAGTGTAAAGACATTATCAACGGAAAACAATAATACTAAAAAGGAAGCTACGAGTTGCGACATATGTGATAGAAGCGATTTTCAATCTGAAGGAGAATTAGCAGCTCATCGTAAGTTATCTCATCATGTCAAAGGTGCTGGAAAAAATGGAGCTGTTAGTTTAAGTTGTGCATATTGTAGTGAGAATTGTAAGACAAGAGCTGAACTTGAAAACCACATGAAAACACATTCCCAAAGCGGAGCTACCGGCGGAAAGCACAAATGTTTAATTTGTGATGAAGTTTTTCCATCCGCAGCAATTCTTGCTGAACACAAACTAACGCACTGTAAAGTGCTTGGTGGTAATAATTGTACTCACTGCAAGTCAGCAATATCTAACGAAGAAGAATTCTTTAATCATCTTTCACAAcactctaataataataataacccaCCAAGTAGTCCACAGTCACCCGCACCACTGAATCTACCGACGCCTTGTGTCATATGCAGACAAACATTAATGTCAGACGTTGAAGCGCGAATACATGCCAGATTCCATCTGAAAAATTCTGGACTAACGTCAGAGTCATATCAATGTGCTTTGTGTTTGAAATCGTATGGTCTTCGTGATGTAATACCTACGGGGGCAGAAATTAATAACGGAATACCCACAACATATGTATGCAAAACTTGTTACAGACAACATAGCGGAACTGTGGAGTCATCTGATGATCGCAGGTGCAGCGAATGTCACCTAAAATTTGAATCAAATGCAGCATTGGAAACCCATATTGAAGAGGTTCACCGGAAAACATACACCTGCATCGAATGCCAAGCCGCATTTGAATCTGAGCAAGAAGTTCGAGCTCATGTTCAAACCCATATAGCAGGATCCGGTTCATTAGAATGCAGACTTTGTCGTCGTTCTCTTGGATCACCATTGCAACTCCAAGCACATTTAATAGAACATACCTTTGCAGGATGTGGAGCGTTTACATGTTATTTGTGTTCAGCAGTATTCACCGGTGCATCTGGACTACAGCAACATATGTTGGCTCATGGACTCGCTGCTCGGCCTTATGATTGTACCAGATGTGGTTTGAAATTCTTCTTCCGAGCCGAATTAGACAATCACAGTTATACACACCTTGAAGACGATGTTAGGATTAAACTGTCAGACGCTGTGGATTCATTGAAACATCCATACTTCTTGGGTCAGAATGGCTTCCATAACATTGAAAGCCTAGCATCTTGTTACTCTACAATCTCCCCTTCTGTTAAAAAGATTAAAACATCCGAAAGTCCAGTTTTATTTAAACAAAGAGAATCGCCCGCCGACTTTAGTAATATTATGACTCTTCAAAATTATAAACGTCAGCCAGATGCCGATAAAGAAAGCAATGTAAATGATCTAAAAACAGAGGACTCTGTCATCAAACAGGAAGTAGAAGAGAAAGATGAATATATTGAAGTAAGCTCTCCAATAACTCCAGCGAAAGATCAAGAAAAAACTAAAAGATCTCCCGAAGACCTTAGTACTACTGCTGAAACTGCACCACTTTTAAGCCCTAAGAAGGAAGTAGTAGATGCGTAA
Protein Sequence: MPFRCDYCSRLFKHKRSRDRHVKLHTGDRKYRCSHCEAAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKRTAGNGDGSPAAHHGLGRGYRCLQCGERFRRPDLLQAHTSCVHSGEMSTTSSPRGTSTPTTPSPRPRSSIHSSLPPKLTCMYCTRDTFTTMEQLQAHIHTMHGALLSADLPLLPPPLPPPPHSDQNGLPTAHSPALPYNCESCTMRFPSSSTLHQHIASAHSKLSPRSPLSCNICSIPFSSTAGLAEHFLMAHGSPPEQLRPTDLSKKSFDRPLKRPRSDEDTLGAGTLLCNQCGAALPDFESFRIHLRAHLEGGACLSCSTCGARFTDPTALERHAAAHLLSLGAEFGCPSCSRAFPKPDELQKHLMDLHAHHLYRCTICKEIFDSKVAIQVHFAVKHSHECKIYKCTACTSPSATFRSEAEFTVHVRTQHAGGQSAPVVAAAARCPYCRATCATELELQFHLAAHAEQYRCPLCREGFHVEFLLDRHMQQHHQHQSLNGGSPKPKQSPSRISVKTLSTENNNTKKEATSCDICDRSDFQSEGELAAHRKLSHHVKGAGKNGAVSLSCAYCSENCKTRAELENHMKTHSQSGATGGKHKCLICDEVFPSAAILAEHKLTHCKVLGGNNCTHCKSAISNEEEFFNHLSQHSNNNNNPPSSPQSPAPLNLPTPCVICRQTLMSDVEARIHARFHLKNSGLTSESYQCALCLKSYGLRDVIPTGAEINNGIPTTYVCKTCYRQHSGTVESSDDRRCSECHLKFESNAALETHIEEVHRKTYTCIECQAAFESEQEVRAHVQTHIAGSGSLECRLCRRSLGSPLQLQAHLIEHTFAGCGAFTCYLCSAVFTGASGLQQHMLAHGLAARPYDCTRCGLKFFFRAELDNHSYTHLEDDVRIKLSDAVDSLKHPYFLGQNGFHNIESLASCYSTISPSVKKIKTSESPVLFKQRESPADFSNIMTLQNYKRQPDADKESNVNDLKTEDSVIKQEVEEKDEYIEVSSPITPAKDQEKTKRSPEDLSTTAETAPLLSPKKEVVDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01025261;
90% Identity: iTF_00179671;
80% Identity: -