Moct010184.1
Basic Information
- Insect
- Myrrha octodecimguttata
- Gene Symbol
- -
- Assembly
- GCA_958510865.1
- Location
- OY294057.1:57564701-57569158[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.00019 4.1 8.8 0.1 22 46 272 296 262 300 0.88 2 6 0.36 7.8e+03 -1.7 0.0 19 44 298 323 295 327 0.74 3 6 0.0045 97 4.4 0.0 20 44 327 351 315 355 0.87 4 6 0.0014 29 6.1 0.0 20 44 355 379 348 382 0.82 5 6 0.0012 25 6.3 0.3 21 45 384 408 379 416 0.89 6 6 0.00053 12 7.4 0.1 20 45 439 464 430 469 0.86
Sequence Information
- Coding Sequence
- ATGGAAATGGAATATGATTTTGAAAAGATTTGCCGAGTTTGTTTAGATGAGAGCGATAAAATGATGTCTCTATTCAAAGTGaatgtttcaagaaaaatcatGTCTTGTGCTTCGGTTCAGGTTTGGCCAAATGATGAATTGCCTGCTCAGATTTGTAATAAGTGTTGTGCCAAGTTACATGTagcatttcaattcaaaaaactCTGTGAGAAGTCCGATTCAAGATTGAGAACTTATATTGCTAAAAATGGTCAGCTGAAATCTAAGGACAATGTAATTCAGCCAAATGATCTAAATCAGCAACCCAGTGCTATAAACAATCAGAATGTATTGAATACACAACTTGAGGAATTAAATAAACGCCAAGATGTTCACCAGGAACAGTTGCAACAAAATACAATAGAAACTATGCAGGACCCAAATAATTGTAGATATGTTGAGTGTAGTAGTGACATTGTTGATGTTTTTGTTCAGGATCCTTCTTATATCCAGAATAGTCAACCCATTGGTTCCATGAATAATTATAACACATCTCAGCCAACAATTCAAACTCCAATTCAAATTGGAAactataatatttcaaatgttatATATAGCACAAGCTATCCAATAACATTGCAGCAACTACAACCACCACCTCTAATGCATAATCAGATGGTTCCTTCGCTACCAGTACAACAAATGCAACAACCCCAACCTCCACCAAGTATTCATCAAGTTTCCGGACTGATATCAACAAATAAAGATATAAGTACCGAGAATAACTCATCCGAAGCAAATTCAGATAAAACAAAGAATGTCAAAAAACCCCAAGACAATCCCAATCAATGTCCAGTCTGTTTGAaggtatttttgaattcaaCTAAAAAGAATAGACAtatgaaaattcattcaaaaacagATATGCCATATAAGTGTACAGTTTGTAGTAAAGAGTTCATGCATGGTGGtaattacaaaatacatatGAGGATGCACAATAATGAAAGGCCATTCAAATGTACAATTTGTCCAAAAGGATTTGTTCAGGCACAGGATCTGGAAAAACATATGAGAACACATACAGgggaacgaCCACACAAATGTCCAATGTGTTGGAAAGCCTTCTCGACCGGTTCAAATTTAATAGCACACGTAAGAACTCATACTGGTGAACGTCCATATGTGTGCTCTGTTTGTTCTAAAGCATTCTGCCAATCCAATGAGTTAACAAAACATATGAGAACCCATACAGGAGAAAAATCGCATAGGTGCGATATTTGTAACAAAGgtttcAATGGCTCCAGTACCTTGATAGTTCATAAAAGGTCGCATACTGGTGAAAAACCATTTGTTTGTAAGATTTGCAACAAGTCCTTTTCACAATCGAGTTGTCTTACAGCACATTTGAAACGTTATGGGAAATCTAAGTTCTGTTGTGATTTATGCAACGTATCCTTCCACTCAGACAAGGTATTGCAAGAGcatgaaaaaactgaagaacattCCACGAAactatttaaatttgaaacgtGCAGTAAGCATGTTGTTTCTACACAAAGTGAATTTGATAAACATTTAATGAATAAACACCTCGATTCCTTGAGTTTGACTGGTAGCTAA
- Protein Sequence
- MEMEYDFEKICRVCLDESDKMMSLFKVNVSRKIMSCASVQVWPNDELPAQICNKCCAKLHVAFQFKKLCEKSDSRLRTYIAKNGQLKSKDNVIQPNDLNQQPSAINNQNVLNTQLEELNKRQDVHQEQLQQNTIETMQDPNNCRYVECSSDIVDVFVQDPSYIQNSQPIGSMNNYNTSQPTIQTPIQIGNYNISNVIYSTSYPITLQQLQPPPLMHNQMVPSLPVQQMQQPQPPPSIHQVSGLISTNKDISTENNSSEANSDKTKNVKKPQDNPNQCPVCLKVFLNSTKKNRHMKIHSKTDMPYKCTVCSKEFMHGGNYKIHMRMHNNERPFKCTICPKGFVQAQDLEKHMRTHTGERPHKCPMCWKAFSTGSNLIAHVRTHTGERPYVCSVCSKAFCQSNELTKHMRTHTGEKSHRCDICNKGFNGSSTLIVHKRSHTGEKPFVCKICNKSFSQSSCLTAHLKRYGKSKFCCDLCNVSFHSDKVLQEHEKTEEHSTKLFKFETCSKHVVSTQSEFDKHLMNKHLDSLSLTGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00130965;
- 90% Identity
- iTF_01024319;
- 80% Identity
- iTF_01024319;