Basic Information

Insect: Myrrha octodecimguttata
Gene Symbol: RREB1_1
Assembly: GCA_958510865.1
Location: OY294059.1:48529060-48537862[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00092 0.15 13.8 1.3 1 23 83 105 83 105 0.98

2 16 0.0007 0.11 14.1 0.2 1 23 118 140 118 140 0.98

3 16 0.00015 0.025 16.2 5.1 1 23 146 168 146 168 0.97

4 16 3.9 6.4e+02 2.4 0.1 1 20 229 249 229 253 0.66

5 16 0.21 34 6.4 2.4 2 23 259 281 259 281 0.97

6 16 6 9.9e+02 1.8 2.2 1 16 327 342 327 347 0.83

7 16 0.19 31 6.5 0.1 1 23 481 503 481 503 0.96

8 16 6e-06 0.00099 20.6 0.7 1 23 512 534 512 534 0.99

9 16 0.00076 0.13 14.0 3.1 1 23 540 563 540 563 0.97

10 16 0.00045 0.075 14.7 3.0 1 23 970 993 970 993 0.97

11 16 0.00045 0.075 14.7 0.4 2 23 1206 1227 1205 1227 0.97

12 16 0.12 19 7.2 6.3 1 23 1233 1256 1233 1256 0.97

13 16 0.013 2.1 10.2 2.6 1 23 1284 1308 1284 1308 0.96

14 16 0.28 46 6.0 1.3 1 23 1367 1390 1367 1390 0.94

15 16 0.015 2.5 9.9 0.4 3 23 1437 1457 1435 1457 0.93

16 16 0.0074 1.2 10.9 5.7 1 23 1463 1485 1463 1485 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00092	0.15	13.8	1.3	1	23	83	105	83	105	0.98
2	16	0.0007	0.11	14.1	0.2	1	23	118	140	118	140	0.98
3	16	0.00015	0.025	16.2	5.1	1	23	146	168	146	168	0.97
4	16	3.9	6.4e+02	2.4	0.1	1	20	229	249	229	253	0.66
5	16	0.21	34	6.4	2.4	2	23	259	281	259	281	0.97
6	16	6	9.9e+02	1.8	2.2	1	16	327	342	327	347	0.83
7	16	0.19	31	6.5	0.1	1	23	481	503	481	503	0.96
8	16	6e-06	0.00099	20.6	0.7	1	23	512	534	512	534	0.99
9	16	0.00076	0.13	14.0	3.1	1	23	540	563	540	563	0.97
10	16	0.00045	0.075	14.7	3.0	1	23	970	993	970	993	0.97
11	16	0.00045	0.075	14.7	0.4	2	23	1206	1227	1205	1227	0.97
12	16	0.12	19	7.2	6.3	1	23	1233	1256	1233	1256	0.97
13	16	0.013	2.1	10.2	2.6	1	23	1284	1308	1284	1308	0.96
14	16	0.28	46	6.0	1.3	1	23	1367	1390	1367	1390	0.94
15	16	0.015	2.5	9.9	0.4	3	23	1437	1457	1435	1457	0.93
16	16	0.0074	1.2	10.9	5.7	1	23	1463	1485	1463	1485	0.98

Sequence Information

Coding Sequence: ATGCAGGGCGTTGTTTTCATGCACCAGCAAGGTTCACCGCCTCCAAATAATACTTCAGAAATGGAAGTATCTCCTAGTCCAATGAACTACTCAACCAAAGAAAAGACAGACCAAAGCCACCACGACTCCGGGATATTCTCAGCGACCAGCAACTCAATCTACGAAGGATCAGAGAATCAAAGTCGGATGACCCAGTCCGAAAACTGCCTCTCAGAAAACGGCAGTGACTGCAGTTCTTCTGACAAATTCTCTTGTCCCATCTGCTCCACCATCTTGACTTCCCAACACGAATTCACTCTTCACATCAAATCTCACAACAGCGATAATGAAACCCTTCAAGACGACAAAGGTTACACTTGTAGAATCTGCCTCAAAGTCTTGAGTTCCAGCTCAAGCTTGGATCGTCATGTACTGGTGCACAGTGGAGAGAGGCCATTTCATTGCAAATACTGTGGCGATACTTTCACCACTAATGGTAACATGCACAGACACATGCGTGCCCATTCTATGAAAAACAAAAACTACGAATCGGATGGAAGCACAGACAGTAGTGCCAGTAACACTGAGTACAACAATAATAGAATAAAGTCCAATCTGAGCAAAAAACGAAAGatagaacgagatgatgaagagaTTGTAAGCAACAAAAGAGCCATAACTTACTCTGATAATGTTCTACAAATTTATAAATGTCCAGTTTGTGAGAGAAACGACTTCGATACCATAACTGTTCTGGAGAATCACATGGAAGACAACCATCCTGACTATCCCGCCAAATGCAGTCAATGCCGCTGCGTCTTTTTAAACCAAAAACAGCTGGAAATCCATAGGGCTACCGTACACGAGAATATCAACCACAAGCATTCTGTGGTCGGATTCAAGGATCTCACCTTCGTAGATTTCTCCAGTGAAAAGTTTCCACATATTGCACGTTACGAATGCGAGAAGAATCTACATAAAGGATCAGGTAGCCTTAAGTTTCAGTGCAAAAGATGCAGTCGTGCTTTCCCCTGCTCAAGCTCCCTGGAATTCCATGAGAAAGACTGTAAGGCTATCGAAAGTAATACTGGACTAGATTTGTCTGCCCAAAATATGACTGAAGTTGAAGTCAGAAGAAACGACTTCTTCTCCCGTTTGAACCTCCAAGATATATCTCCTGAAAAACATATCCCAACCAAAACTATCCAAAACGAAAATTCTGTTAAAAGTGAATACAGAATGCTGCCAGACAACAACAAAGACCTGGCAGACATACAAACTATAATATCAATGACCACAAGCGGTAGTCTGCTACAACAATTACAGCACAAAACAAACGAAATGACCAACAGTCTCCAAAAATCGCACCCAGATATACCAGCAGAATCGACAAAGAATGAGGAGGAAGAAACTCAAGACGCATTTGCTGTCGAGTTCCGTAAAATGAAGTTGAAAGGGGAGTTTCCTTGTAGATTATGCACAGCTATATTCCCCAACTTGCGTGCTCTGAAAGGACATAATAGAGCGCATCTTAATGGAAACAACAACGGCTCATATCGCTGCAATATGTGCCCCCATTCTTCAGTTGATAAGGCTGCCCTCATTCGTCATATGCGTACACATAACGGCGATCGACCTTATGAATGCTCTCTGTGCAATTACGCGTTCACAACGAAAGCCAACTGTGAAAGACATCTTAGGAATCGCCATGCCAAAACGACGAGAGAAGAAGTGAAAAAATCCATCATCTACCACCCTTCAGAAGACCCAACGAATGATGAGATGACTAAACTCGCGAACAGAGACGAATCAAAAAAGTTGCACAATTCTTCCAATGAAGTCTTTGACAATGGTCCAGATAAAATTCACTGCTCTActccaaaatttgaaaacagaCCTCTTCCTCCAGAACTGAAACATATCACTACGTCTGAAAGAAATCCTTTGCTCTCCAACTTGCAAACGCTTAAAGAAAGTCTTAATTTGTCGATAGTTAAAGAGCCTATGCAATTATTCCCAAATATCAATGAAGTTATTAGGAATGAGAATCTCAAAACACTCAAAGATTATCGAACCACTCATAATGGAGCTATACCGGTTACTCCATACCTGCCATCCTACGGCTTCCAACATAAATTGAACAATGTTCAAACTCCACCTGCACCAGGTACCATTCAAGTTAAAAATCTGAGTGTCCTTAAGATGAATTCCTACGAGAATAATTCTGATGATGAAGAATATGATGATGACGAAGAGTCAGTCGATGTCGCATTAGATTTGAGCAAGAAAAAACATGTAGAAGAAGAAACTAAAACAATTGAAGATATTCCTCAAGACTTATCAGTTAAGGGTTCTCCTCCTGCGTCTCAAGTCCCAACTCCTGTTGCGGAAATTCTGCAGGCAAATCTTCTCAAAGCGCCTCCAAAGATAGACCCAGCAGCTTTTTACGCACAGTGGGCTTTGCTCAGAAATGGTTTTGCTGGTTTGCCAAGTTGGCCGAGTTTTCCATTCAACCCgttatttttccaacaaatcCAGAGTCAGATGCCAGCAGGAGCAGCCTCCGACATGAAAGATAGATTGAGAAATCAGCTTTGTGGTGGAACAATGATAACTGAGAATCGTTTGCAGGCCTTACAACAAATGAGGAATGCAGGCTTGGTACCAATGGCcatgaataacttcagcaaTGAAGGCAGACAGGAAGCTGAAAACGCGTACTCCCCTTCCAAAACAACGGAGGATCTGAGTAGACCCCTCAGTTTAACAATTGAGCAAAACATGAACGAAAATTTATCCAAAATCAACAGCCCTTTACCACACAATAATGCAGATATTTTACAATCTCCAAATTCAGTGAAAATGGTTATAAAGAATGGTATCCTGATGCCTAAACAAAAGCAGAGGAGATATCGAACTGAAAGACCCTTCACCTGCGAACATTGTTCGGCTAGGTTCACTCTTCGTTCCAACATGGAGCGTCACATCAAACAACAACACCCTCAATTCTGGTCCCAACGTCAGAGGGGCAATATTGGTAACCCTGGCAGGAAATCACAGGTCATGCCTATGAAACCAGGTTTCTGTGATTTGAGCATTCCCAGTTATGAAATGCAAAAGAATAACagatatgaagaaaataaagaGATCTTGAGCGATAGGATCAAATTTGCTATCCTTGCCCAGCATCTTAGAGGGGTGAACAATTTCAATAACAACATAAAAAGGGAGGAAGATGAAGAAGATGCTTTGATCATCGACGAAAATAGCGAAGAGAAGCCTGATCTAGAAACCGCACATGAAGCATTCAGAAATGAAGATCATGGAGAAGAGAAGGAAGAATCTATCAAAGAGCCAATTAATTGTGAAAATAAAGTGGGTAAATTAGAGGAGAGCCAAGACTTAGTGCCGGTTTCGAGACTGTTAGATAACGCATCCCAGCAACAATTTAACGAGTATTTCAAGAGAGACGTTGAAGAAAATGGAGCTGGTAGCGAAGAAGATGAAGAAGGATTAGTAGCCAGTGGTAGTACCAGCGAAGGAAACATCTCTGGAACTGACGAAAATAAGTCTGAATCAGAAAACACAGCACCAGTAAAGAAAAAGTCTGCCTATTCCCTAGCGCCAAACAGAGTTAGCTGTCCATACTGCAGTCGTAAGTTCCCCTGGACGTCATCCCTCAGACGTCATATCTTAACACATACTGGTCAGAAGCCCTTTAAATGTAGCCACTGTCCTCTTCTTTTCACTACCAAGTCAAATTGTGACCGTCATCTCCTGAGGAAACACGGAAACGCTGCTACCACCATAACAAACGATGTGGTCAATCATAATGCCAACTATCTGATGAGAAATGTTCCTGAAAGACCCTTCAAGTGTTCAAATTGCCCAAGCAGCACTTTCTCCACATATACGAATCTCAAGAAACATATCAGTTCTAAGCATGCTACTAATGCTCAGGGTGATGATATCAGAGCTCAGGGCTACGAAGCCGGTAGCTCAGAAGACGAGAAAGTGGTCAATATTCCTGAGAATTTAAGCGAGTGGAATAATCAGAATTTGCAGAACAAAGTGCCCAATCATGAACCTCTACCTAACATTATTAATGCAGACCAACCCTTCAAATGCCATCTCTGTGAATTTTCTTTTGGTGAACGTCAAGAAGCATTGGACCATATCAAAGAAAAACATGCTTCGGAATATGACTTGCTGATGTCCAAGAACGCATTGGATAGCAGCGCGACAACGCCTGAAGAAAGCATTCATAATGACGATGAAGATAATGAAATAAGGGGTAAATTTCCTGACTACTCCAACAGGAAAGTTATATGTGCGTTTTGCATGCGTCGATTCTGGTCTGCAGAAGATCTGAGGCGACACATGAGGACCCACACCGGGGAAAGACCCTTTATGTGCGATATTTGCCGGAGAAGATTCACTCTTAAACACAGTATGTTGCGCCACAGGAAAAAGCATAATGTTAACTTCGACAATGACGCGGCATTGAACAGTGACGAAGAGGGTGTTTCCCCAAAGTATGAAACAAGTAATACCAACAAAAAAGCGGAAGATTCTGATTGTAATGAAGGTGGAGATCTCATTAGCAATCTGCTTGGTATTCGTCCGTCTTTCATCGAAAAAGTGCTAACTTCTTCGGCAGATGATGCCGCCAAGCTTTTAGGCGTCAGAAACGGCGTTAAAGAGTGA
Protein Sequence: MQGVVFMHQQGSPPPNNTSEMEVSPSPMNYSTKEKTDQSHHDSGIFSATSNSIYEGSENQSRMTQSENCLSENGSDCSSSDKFSCPICSTILTSQHEFTLHIKSHNSDNETLQDDKGYTCRICLKVLSSSSSLDRHVLVHSGERPFHCKYCGDTFTTNGNMHRHMRAHSMKNKNYESDGSTDSSASNTEYNNNRIKSNLSKKRKIERDDEEIVSNKRAITYSDNVLQIYKCPVCERNDFDTITVLENHMEDNHPDYPAKCSQCRCVFLNQKQLEIHRATVHENINHKHSVVGFKDLTFVDFSSEKFPHIARYECEKNLHKGSGSLKFQCKRCSRAFPCSSSLEFHEKDCKAIESNTGLDLSAQNMTEVEVRRNDFFSRLNLQDISPEKHIPTKTIQNENSVKSEYRMLPDNNKDLADIQTIISMTTSGSLLQQLQHKTNEMTNSLQKSHPDIPAESTKNEEEETQDAFAVEFRKMKLKGEFPCRLCTAIFPNLRALKGHNRAHLNGNNNGSYRCNMCPHSSVDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKSIIYHPSEDPTNDEMTKLANRDESKKLHNSSNEVFDNGPDKIHCSTPKFENRPLPPELKHITTSERNPLLSNLQTLKESLNLSIVKEPMQLFPNINEVIRNENLKTLKDYRTTHNGAIPVTPYLPSYGFQHKLNNVQTPPAPGTIQVKNLSVLKMNSYENNSDDEEYDDDEESVDVALDLSKKKHVEEETKTIEDIPQDLSVKGSPPASQVPTPVAEILQANLLKAPPKIDPAAFYAQWALLRNGFAGLPSWPSFPFNPLFFQQIQSQMPAGAASDMKDRLRNQLCGGTMITENRLQALQQMRNAGLVPMAMNNFSNEGRQEAENAYSPSKTTEDLSRPLSLTIEQNMNENLSKINSPLPHNNADILQSPNSVKMVIKNGILMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGNIGNPGRKSQVMPMKPGFCDLSIPSYEMQKNNRYEENKEILSDRIKFAILAQHLRGVNNFNNNIKREEDEEDALIIDENSEEKPDLETAHEAFRNEDHGEEKEESIKEPINCENKVGKLEESQDLVPVSRLLDNASQQQFNEYFKRDVEENGAGSEEDEEGLVASGSTSEGNISGTDENKSESENTAPVKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNAATTITNDVVNHNANYLMRNVPERPFKCSNCPSSTFSTYTNLKKHISSKHATNAQGDDIRAQGYEAGSSEDEKVVNIPENLSEWNNQNLQNKVPNHEPLPNIINADQPFKCHLCEFSFGERQEALDHIKEKHASEYDLLMSKNALDSSATTPEESIHNDDEDNEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFMCDICRRRFTLKHSMLRHRKKHNVNFDNDAALNSDEEGVSPKYETSNTNKKAEDSDCNEGGDLISNLLGIRPSFIEKVLTSSADDAAKLLGVRNGVKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00130772;
90% Identity: iTF_00965431;
80% Identity: -