Basic Information

Insect: Megalocaria dilatata
Gene Symbol: RREB1
Assembly: GCA_034642435.1
Location: CM067856.1:30564522-30569224[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0013 0.14 13.8 1.3 1 23 63 85 63 85 0.98

2 16 0.00042 0.047 15.3 0.4 1 23 98 120 98 120 0.98

3 16 0.00021 0.024 16.2 5.1 1 23 126 148 126 148 0.97

4 16 7.7 8.6e+02 1.9 0.1 1 20 209 229 209 233 0.66

5 16 0.67 75 5.2 0.8 2 23 239 261 239 261 0.96

6 16 8.3 9.3e+02 1.8 2.2 1 16 307 322 307 327 0.83

7 16 0.26 29 6.5 0.1 1 23 461 483 461 483 0.96

8 16 8.3e-06 0.00093 20.7 0.7 1 23 492 514 492 514 0.99

9 16 0.001 0.12 14.1 3.1 1 23 520 543 520 543 0.97

10 16 0.00062 0.07 14.8 3.0 1 23 948 971 948 971 0.97

11 16 0.00062 0.07 14.8 0.4 2 23 1184 1205 1183 1205 0.97

12 16 0.16 18 7.2 6.3 1 23 1211 1234 1211 1234 0.97

13 16 0.017 2 10.2 2.6 1 23 1262 1286 1262 1286 0.96

14 16 0.49 56 5.6 1.3 1 23 1345 1368 1345 1368 0.92

15 16 0.021 2.4 10.0 0.4 3 23 1415 1435 1413 1435 0.93

16 16 0.01 1.2 10.9 5.7 1 23 1441 1463 1441 1463 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0013	0.14	13.8	1.3	1	23	63	85	63	85	0.98
2	16	0.00042	0.047	15.3	0.4	1	23	98	120	98	120	0.98
3	16	0.00021	0.024	16.2	5.1	1	23	126	148	126	148	0.97
4	16	7.7	8.6e+02	1.9	0.1	1	20	209	229	209	233	0.66
5	16	0.67	75	5.2	0.8	2	23	239	261	239	261	0.96
6	16	8.3	9.3e+02	1.8	2.2	1	16	307	322	307	327	0.83
7	16	0.26	29	6.5	0.1	1	23	461	483	461	483	0.96
8	16	8.3e-06	0.00093	20.7	0.7	1	23	492	514	492	514	0.99
9	16	0.001	0.12	14.1	3.1	1	23	520	543	520	543	0.97
10	16	0.00062	0.07	14.8	3.0	1	23	948	971	948	971	0.97
11	16	0.00062	0.07	14.8	0.4	2	23	1184	1205	1183	1205	0.97
12	16	0.16	18	7.2	6.3	1	23	1211	1234	1211	1234	0.97
13	16	0.017	2	10.2	2.6	1	23	1262	1286	1262	1286	0.96
14	16	0.49	56	5.6	1.3	1	23	1345	1368	1345	1368	0.92
15	16	0.021	2.4	10.0	0.4	3	23	1415	1435	1413	1435	0.93
16	16	0.01	1.2	10.9	5.7	1	23	1441	1463	1441	1463	0.98

Sequence Information

Coding Sequence: ATGGAAGTGTCTCCTAGTCCAATGAACTACTCAACCAAAGAAAAGTCAGACCAAAGCCACCACGACTCCGGAATATTCTCAGCGACCAGCAACTCGATCTACGACGGATCAGAGAATCACAGTCGAATGACTCAGTCCGAGCACTGCCTCTCAGAAAACGGCAGTGATTGCAGTTCCACCGACAGATTCTCTTGTCCCATCTGCTCCACCATCTTAACTTCCCAACATGAATTTACTCTACACATTAAGTCTCATAACAGCGACAATGAGACCATGCAAGACGACAAAGGTTACACCTGCAGAATTTGTTTCAAGGTCTTGAGTTCCAGTTCAAGCTTGGATCGACATGTGTTGGTTCACAGCGGAGAAAGGCCATTCCATTGCAAATATTGTGGGGATACATTTACCACTAACGGTAATATGCACAGGCACATGCGAGCCCACTCCATGAAGAATAAGAATTACGAGTCTGATGGAAGCACAGACAGCAGTACTAGTAACACCGAATACAACAATAACAAAATAAAGTCCAAGTTGAACAGAAAGAGGAAAATAGAGCAAGACGATGAAGAAATTATCAACAACAAAAGAACCATGACTTACTCTGATGATGTTCCTCAAACCTATAGATGTCCAGTTTGTGAAAGAAATGACTTCGATACTATTACGGTCTTAGAAAATCATATGGAAGATAACCACCCTGACTATCCTGCAAAATGCAGTCAGTGCCGCAACATCTTCCTGAACCAGAAACAACTAGAGATCCACAGGGCTACAGTGCACGAAAACATCAACCAAAAACACTCTGTCGTCGGTTTTAAGGATCTCACCTTCGTAGATTTTTCAAGTGAAAAATTTCCGCATATCGCTCGCTACGAATGCGAGAAGAATTTACATAAAGGTTCAGGTAACCTTAAGTTTCAATGCAAAAGATGTAGTCGTGCCTTCCCTTGCTCTAGCTCACTAGAATTCCACGAAAAAGACTGCAAATCTGTTGAAAGTAATGCTGGCTTAGATCTTTCTGCTCAAAAGTTGACAGAAGTTGAAGTCAGAAGGAACGACTTCTTTTCCCGTTTGAACCTCCAAGACATATCTCCTGAAAAACATATCCTTAATAAAACTAGACAAAATGAGAATGCTGTAAAAAGCGAATACAGATTGCTAGCAGACAACAATAAAGATCTGGCAGATATACAAACCATAATATCCATGACCACAAGCGGTAGTCTTCTACAACAACTACAGCACAAAACAAACGAGATGACCAACAATCTCCAAAAATTGCACCCAGAAATACCACAGGAATCGACAAAGAATGAGGAGGAGGAAACTCAAGACGCCTTTGCTGTAGAATTCCGTAAAATGAAGTTAAAAGGAGAGTTTCCCTGTAGATTATGCACAGCCATATTTCCGAACTTGCGTGCTCTGAAAGGACATAACAGAGCACATCTTAATGGAAATAACAACGGCTCATATCGTTGCAATATGTGCCCTCATTCTTCGGTTGATAAGGCTGCCCTCATTCGTCATATGCGTACCCACAACGGTGATCGACCTTACGAATGCTCTCTATGCAATTATGCATTCACAACTAAAGCCAACTGCGAAAGACATCTCAGGAATCGACATGCCAAAACAACAAGGGAGGAAGTGAAAAAATCCATCATTTACCACCCTTCAGAAGATCCAACCAATGATGACATAACTAAATTGTCCAGCAGGGAAGATTCAagaaaactacaaaattctTCCAGTGAACTTTTCGACAATGCTCCGGAGAAAATCCACTGCTCTACTCCGAAATTCGAAAACAGACCTCTTCCACCCGAACTAAAACTTACCACTCCTGAAAGAAATCCCATGATTTCCAATATACAAACGCTGAAAGAAAGTCTTGGTTTATCATTAGCTAAAGAACCTATGCAGTTATTCCCGAATATCAACGATGTTATTAGGAATGAAAACCTGAAAACCCTCAAAGATTATCGAAATTCTCATAACGGAGCTATTCCGGTTACTCCCTACTTGCCACCTTACGGCTTCCAACATAAACTGAACAATGTTCCAACTCAACCTACACCAGGTACAATTCAGGTAAAAGATCTGAGTGCATTAAAAATGACTCCATACGAGAACAACTCCGATGATGAAGAATATGAAGATGACGAAGAATCAATCGATGTTGCATTAGATTTGAGCAAGAAGAAACAGACAGAAGAACCTAAGTTGGTTGAAGATATTCCTCAGGATTTATCTGTCAAAAGTTCTCCTCCACCCTCTCAAGTTGCCACACCTGTTGCAGAAATGCTTCAAGCCAATCTTCTCAAGACACCTCCTAAAATAGACCCTGCCGCTTTTTACGCACAATGGGCTTTGTTAAGAAACGGGTTTGCTGGTTTGCCAAGTTGGCCCAGTTTTCCATTCAACCCACTATTTTTCCAACAAATTCAGAATCAAATGCCTGCAGGAGCAGCCTCAGACATGAAGGATAGGCTAAGAAATCAGCTATGTGGTGGAACAATGATTACTGATAACCGTTTGCAGGCCTTACAACAGATGAGGAATGCAGGATTAGTACCCATGACCATGaataacttcagtaatgaaggaAGACAAGAAGTGGAAAACACATATTCACCTTCGAAAACGACGGAAGATCTGAGTAGACCCCTTAGTCTAACAATTGAACCAAACATGAACGAAAATATGTCCAAGATGAACAGTCCCTTACCACACAGTAAAGCCGATATTTTACAATCTCCAAACTCCGttaaaatggttataaaaaACGGAATTTTGATGCCTAAACAAAAGCAGAGGAGATATCGAACTGAAAGACCTTTCACTTGCGAACATTGTTCAGCAAGATTCACTCTACGTTCCAACATGGAGCGTCACATCAAACAACAGCACCCTCAATTCTGGTCACAACGTCAGAGGGGCAATATTGGTAACCCTGGCAGGAAATCTCAGGTTATGCCCATGAAACCAGGTTTTTGCGATTTGAGCATTCCGAGCTATGAAATACAGAAGAATAATGGATATGAGGATAATAAAGAGATGTTGAGCGATAGGATAAAGTTTGCCATCCTTGCTCAACACCTCAGAGGAGTTAACAACTTCAATAATGCCATAAAAAGGGAGGAAGATGAAGAAGATGCTTTAGTCATTGATGAAAATAGTGAAGAGAAACCTGATATAGAAACTGTACACGATACTTCCAGAAGTGAAGATCATCAGGAAGAGAGGGAAGAATTTGCTAAAGAACCAATCAATTTCGAAATCAAAGTTGGTAAATTAGAGGAAAGTCAAGACTTAGTGCCAGTTTCGAGACTATTGGATAATGCATCTCAGCAACAGTTCAACGAGTATTTCAAGAGAGACGTGGAAGAAAATGGTGCTGGTAGTGAAGAAGACGAGGAAGGATTGGTAGCCAGTGGTAGTACAAGCGAAGGAAACATCTCTGGAACTGATGAAAATAAGTCTGAGTCAGAAAATACAGCACCAGTTAAGAAAAAGTCCGCCTATTCTCTAGCACCAAATAGAGTCAGCTGTCCCTACTGTAGTCGTAAGTTCCCATGGACATCATCCCTTAGACGCCATATTCTAACCCATACTGGTCAGAAACCCTTCAAATGTAGCCACTGTCCTCTGCTGTTCACCACCAAGTCAAATTGTGACAGGCATCTTTTAAGAAAACATGGAAATGCGGCTACCACCATCACAAATGATGTAGTAAACAATAATGCCAACTATCTAATGCGAAATGTTCCTGAAAGACCTTTTAAGTGTTCAAATTGTCCAAGCAGCACATTCTCAACCTACACGAATCTTAAAAAACATATCAGTTCAAAGCACGCAACTAATGCTCAGGGTGATGATATCAGAGCTCAAGGTTACGAGGCAGGTAGTTCAGAAGATGAGAAAGTTGTaaatttatctgaaaatataagtGATTGGAGTAACCAAAATATACAAACCAAAATCTCCAATCATGAACCTCTGCCTAGTATTGTTAATGCTGATCAACCCTTCAAATGCCATCTTTGTGAATTTTCATTTGGGGAACGACAAGAAGCCTTGGAACATATTAAAGACAAACATGTCTCTGAATACGACTTATTAATGTCTAAGAATGCACTGGATAGCAGCGCGACAACTCCTGAAGAAAGCACCCATAATGATGATGAAGATAGTGAAATTAGGGGTAAATTTCCTGACTACTCCAACAGAAAAGTGATCTGTGCATTTTGCATGCGCCGATTCTGGTCTGCTGAAGATCTGAGGAGACATATGAGGACCCACACCGGTGAAAGACCTTTTATGTGCGACATCTGCCGAAGGAGATTCACACTGAAACACAGTATGTTACGTCATAGGAAGAAGCATAATGTTAACTTCGACAATGACGCGGCAATGAATAGTGATGAAGAGGTTGTTTCTCCAAAGTATGAGACAagtaataacaacaaaaaagcAGACGATTCTGATTGTAACGAAGGTGGGGATCTCATTAGTAATCTGCTTGGGATTCGTCCATCTTTTATCGACAAAGTATTAACTTCTTCAGCAGACGATGCTGCTAAGCTTTTAGGAGTCAAAAACGGCGTTAAAGAGTAA
Protein Sequence: MEVSPSPMNYSTKEKSDQSHHDSGIFSATSNSIYDGSENHSRMTQSEHCLSENGSDCSSTDRFSCPICSTILTSQHEFTLHIKSHNSDNETMQDDKGYTCRICFKVLSSSSSLDRHVLVHSGERPFHCKYCGDTFTTNGNMHRHMRAHSMKNKNYESDGSTDSSTSNTEYNNNKIKSKLNRKRKIEQDDEEIINNKRTMTYSDDVPQTYRCPVCERNDFDTITVLENHMEDNHPDYPAKCSQCRNIFLNQKQLEIHRATVHENINQKHSVVGFKDLTFVDFSSEKFPHIARYECEKNLHKGSGNLKFQCKRCSRAFPCSSSLEFHEKDCKSVESNAGLDLSAQKLTEVEVRRNDFFSRLNLQDISPEKHILNKTRQNENAVKSEYRLLADNNKDLADIQTIISMTTSGSLLQQLQHKTNEMTNNLQKLHPEIPQESTKNEEEETQDAFAVEFRKMKLKGEFPCRLCTAIFPNLRALKGHNRAHLNGNNNGSYRCNMCPHSSVDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKSIIYHPSEDPTNDDITKLSSREDSRKLQNSSSELFDNAPEKIHCSTPKFENRPLPPELKLTTPERNPMISNIQTLKESLGLSLAKEPMQLFPNINDVIRNENLKTLKDYRNSHNGAIPVTPYLPPYGFQHKLNNVPTQPTPGTIQVKDLSALKMTPYENNSDDEEYEDDEESIDVALDLSKKKQTEEPKLVEDIPQDLSVKSSPPPSQVATPVAEMLQANLLKTPPKIDPAAFYAQWALLRNGFAGLPSWPSFPFNPLFFQQIQNQMPAGAASDMKDRLRNQLCGGTMITDNRLQALQQMRNAGLVPMTMNNFSNEGRQEVENTYSPSKTTEDLSRPLSLTIEPNMNENMSKMNSPLPHSKADILQSPNSVKMVIKNGILMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGNIGNPGRKSQVMPMKPGFCDLSIPSYEIQKNNGYEDNKEMLSDRIKFAILAQHLRGVNNFNNAIKREEDEEDALVIDENSEEKPDIETVHDTSRSEDHQEEREEFAKEPINFEIKVGKLEESQDLVPVSRLLDNASQQQFNEYFKRDVEENGAGSEEDEEGLVASGSTSEGNISGTDENKSESENTAPVKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNAATTITNDVVNNNANYLMRNVPERPFKCSNCPSSTFSTYTNLKKHISSKHATNAQGDDIRAQGYEAGSSEDEKVVNLSENISDWSNQNIQTKISNHEPLPSIVNADQPFKCHLCEFSFGERQEALEHIKDKHVSEYDLLMSKNALDSSATTPEESTHNDDEDSEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFMCDICRRRFTLKHSMLRHRKKHNVNFDNDAAMNSDEEVVSPKYETSNNNKKADDSDCNEGGDLISNLLGIRPSFIDKVLTSSADDAAKLLGVKNGVKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00130772;
90% Identity: iTF_01024348;
80% Identity: -