Mtes008408.1
Basic Information
- Insect
- Myopa tessellatipennis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_943737955.2
- Location
- OX031314.1:61818896-61820080[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-108 1.2e-103 347.7 27.2 1 299 30 318 30 319 0.97 2 2 0.12 2.5e+03 -1.4 4.3 220 244 347 371 322 393 0.46
Sequence Information
- Coding Sequence
- ATGGACACTTCCAGCGCAGTAGGAAGGCGCAGAATTAATTCCCGTGTCAACGCAGAGGACCAAGCGCTCGACCAAATTGCAAAGGAAGCTGAAGCTCGTTTGGCCGCACGCAGACAAGCACGTGCCGAGGCCCGTGAAGTGCGAATTCGTGACCTTGAACGACAACAAAGGCATCTGGAACAGAATGCCGACCGTGTATTTGACATGCATTCGGTTAGTGGTATAGATCCTTTGTCACGAACGCGTCTAAGTTCCGTGGTGAGCGGTTCTCCCGTTACAAGAGCTAGCTCGATGTCATCACGTCGCAGTAGTGAGGATTCCCTGGAAGAGGAGGGTCGTGGATTGCGCGATATGCGGCATGAGTTAAAAGAGGTAGAGGAGCGTTTTCGTAAAGTAATGATAGCCAATGCGCAGTTAGATAATGAATGTGCTTCCCAAACGTATCAAATACAGCTGCTGAAGGATAAATTGGAAGAAGTTGAAGAGTCGTACGCGCAACTGCAACGGGAGTTCAAAGAAAAGATGCGTGATTTTAGTTCCCTGAAGAGAAGTCTCGATAAGGTGAGAGACGAATTGAGGCTTGTAAAGGGTCAGTTGGATGAACGCGACAAGCTGATCGAGGAACAGGGTTTGGTAATTGTTTCAGTCGAAAACGCCGATGGCACTGATGCTAAACGTGCTCTAGTCACCCTAGATAATGCGCAGCTACTGGGTTCTGTGCAGGGATCTCTGGATATACGACTCAAGAAATTCAGTGAAGAAAAGCATCAGCTTCTGGCCGAGGTGAAAAATTTGGAACAGCAATTGGAAGCTTATAAGGCGCGAAGTGGTAAAGGGAGTATTGCTAATGGACCTGCAGGCACAGAAGATGATGAATACGAAGCCCAAAGGGAAGCGAACAAAATTATATCCGATTATAAATACAAACTACAAAAGTCCGAACAGGAAGTTGCTAATCTGCAGGCTAGCTTAGCACGTTCTGAGACGCAAGTGATACGCTATAAGAGCACAGCTGAGGCTGCTGAAAAGGCTGAAGCCGAGTTAAAAATTGAGCGTCGGAAATTACAGCGAGAGAATCGTGAAGCTATGGAACGGTTAGAGGAGTTGGAAACATCAAACAATCATTTGCTTAAACGCTTGGACAAATTGAAGAATGCCAAGAGTGCGCTTCTGAAAGAGCTTTGA
- Protein Sequence
- MDTSSAVGRRRINSRVNAEDQALDQIAKEAEARLAARRQARAEAREVRIRDLERQQRHLEQNADRVFDMHSVSGIDPLSRTRLSSVVSGSPVTRASSMSSRRSSEDSLEEEGRGLRDMRHELKEVEERFRKVMIANAQLDNECASQTYQIQLLKDKLEEVEESYAQLQREFKEKMRDFSSLKRSLDKVRDELRLVKGQLDERDKLIEEQGLVIVSVENADGTDAKRALVTLDNAQLLGSVQGSLDIRLKKFSEEKHQLLAEVKNLEQQLEAYKARSGKGSIANGPAGTEDDEYEAQREANKIISDYKYKLQKSEQEVANLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01426682;
- 90% Identity
- iTF_01426682;
- 80% Identity
- -