Basic Information

Insect: Mycalesis mineus
Gene Symbol: -
Assembly: GCA_034621355.1
Location: JAXAVZ010000334.1:195014-200828[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.74 1.1e+04 -2.7 0.0 22 44 242 264 240 272 0.81

2 12 1.1 1.6e+04 -3.2 0.0 21 31 269 279 263 291 0.76

3 12 0.083 1.2e+03 0.4 0.0 21 44 298 321 293 324 0.85

4 12 0.0094 1.4e+02 3.4 0.0 21 43 326 348 320 358 0.80

5 12 0.0039 58 4.6 0.0 21 45 382 406 379 415 0.90

6 12 0.019 2.9e+02 2.4 0.1 24 46 413 435 407 441 0.82

7 12 0.0082 1.2e+02 3.6 0.0 21 44 438 461 434 469 0.87

8 12 0.0028 42 5.1 0.0 21 46 494 519 489 525 0.86

9 12 2.8e-06 0.041 14.7 0.1 21 45 550 574 542 581 0.88

10 12 0.015 2.3e+02 2.7 0.1 21 52 578 609 574 611 0.85

11 12 0.02 3e+02 2.4 0.3 21 52 606 637 601 639 0.84

12 12 0.05 7.5e+02 1.1 0.1 20 45 689 714 683 716 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.74	1.1e+04	-2.7	0.0	22	44	242	264	240	272	0.81
2	12	1.1	1.6e+04	-3.2	0.0	21	31	269	279	263	291	0.76
3	12	0.083	1.2e+03	0.4	0.0	21	44	298	321	293	324	0.85
4	12	0.0094	1.4e+02	3.4	0.0	21	43	326	348	320	358	0.80
5	12	0.0039	58	4.6	0.0	21	45	382	406	379	415	0.90
6	12	0.019	2.9e+02	2.4	0.1	24	46	413	435	407	441	0.82
7	12	0.0082	1.2e+02	3.6	0.0	21	44	438	461	434	469	0.87
8	12	0.0028	42	5.1	0.0	21	46	494	519	489	525	0.86
9	12	2.8e-06	0.041	14.7	0.1	21	45	550	574	542	581	0.88
10	12	0.015	2.3e+02	2.7	0.1	21	52	578	609	574	611	0.85
11	12	0.02	3e+02	2.4	0.3	21	52	606	637	601	639	0.84
12	12	0.05	7.5e+02	1.1	0.1	20	45	689	714	683	716	0.82

Sequence Information

Coding Sequence: ATGGAGCTCGTTGAGAGACATAACCTAATATCAAGACAACACGTTGAAGCAATAAGCCAAGCGAAAAAAGATCTCAACCACAATCTAGTGACCACACACTTCGGCCCCAACCACTGTGACCTGCACGTAGTCGACCACCAGGACAAacacacagacaaacaaacGGAATACACGATGGTCGAAATAGACATAGTCAAGAGCGAGAGGGCTGTGACGTCAGAGGAGGAAGACTCGGATGATAAACATTTCGACAACAGCATCATGGTGGAGCTGAAGCCCAGtaaatgtgacgtcacacagGCGTACAGCTGTGACGTCACGGAGGATCCCTTGAAGTACGAAGTGTCGTTCAATTGTACAATTTGTTCGGAGGAGTTCGTTCACGAGCACGCTTATAACGAGCATATGATTATGCACCTCCAGaactGTGACGGTGGTGACACTCCCAGAGTTCGAGAGCCCCAAGAGAACTGCAGCGACTCTATACACTCTACTAACAAGAGGAGTGCTATGAAGCTGGAAGATGAGCTTGATCAGTCGACACACTCGCAACACACATTTGttacccCATTTCATATGTCGTCATCAACTGGCGAAACATACGAGGGAAGTGATCAGATTGAACCTGGTGAACATCCTTCAACCAACCTACACGACAGACTGTTCGAATGCGAATTCACACCGAGCAGCATTCTAGATTGTTCTCTAGAAACCGACGACATGGACAAACCGTTCTCGTGTCATTTATGTGACACAAAATTCACTTTAAACAGCTCCCTCGTCAGGCATATGAAGTCACATACTGGTGAAGAACCTTTCTCCTGCAATTTGTGTGACATGAAATTCACAAGTGCCAGTGCTTTAGTGAAACATAATGTGAATATGCATAAAAGTGATAAACTCATCGGCTGTAACATTTGTGACGCGAAGTTCACGTCCAATAGCTCGCTGGTCAGGCACATCAGAAGTCATACTGGTGACAAACCTTTCACTTGCAATCTATGTGACGCTAAATTCACACAAAACAGTTCTTTATTAGCGCATAAAAAGAACCACGCCGGCGTCAAACCTTATAAATGTGACTTGTGCGAGTCGAGGTTTTCCAAAAACAGTTCGCTTATACGACATATGATAACACACACTGGTGAAAAACCTTTTTACTGTACTTTGTGTGatggaaagtttactcaaaataGTGCTCTAAAAAGACATATGGACACGCACACTGGTCAGAAAGCTGTCAGTTGTAACATATGCGGATCAAAGTTCACACAAAACAGCTCGCTCGTCAGACATATGAGGACACATACTGGTGAAAAACCCTTTTCTTGCAGCATATGTGACGCGAAGTTCTCACTGAACAGTGCATTAAAAAAACACGTGAAATCGCATGAAAACGAAAAGGAATGTTACTGCGAGTTGTGCAACCAAGTGTTTCCAAATAAAAAGGATTTGCTGGATCACATACGAACACACACCGGTGAAAGACCTTTATCGTGTAACATATGTAACGATATATTCATAAACAAcgaagatttaaaaaaacacatgaGAACCCATAacgttgttaaaaaatatttttgcgacGAATGCAACCACCAGTTCCCTTCAAAACGAAATTTAACAATCCACAAACGGGTACACTCTGGTGAAAAACCGTTTACATGTAACATATGTGATACGACGTTTACACAGAATTGCAACCTGGTGAGACACCTCCGTACACATTCTGGTGAACGACCCTATGCTTGCGTGTTGTGTCATCAGAAATTCGCAAACAACAGTAATCTGGTCAGCCATATGAAGGTACACACTGATGAGAAGCCTGCGTCTTGCGAATACTGTCCATATAGAACGAAGCACGCCAACGCATTGGTTCAGCATTTGAGAATACATACTGGTGAGAAACCCTACTCCTGCGACGAGTGTGGGTACAAATGCACACAAAGGGGAACTTTGCTCGCACACTTCAAGACACACACTGGTGAGAAACCCTTCATCTGCGACTTGTGCGGTTATAAATGTGCGCTAAAAACTGCACTAGTGAACCACAGGAGAACacatactggtgaaaagcccTATAACTGCAATTTGTGTGACTTTAAATGTGCTGTCAAAAGTAATTTGTTAAGACACATGAAAACGCATGGAGGttga
Protein Sequence: MELVERHNLISRQHVEAISQAKKDLNHNLVTTHFGPNHCDLHVVDHQDKHTDKQTEYTMVEIDIVKSERAVTSEEEDSDDKHFDNSIMVELKPSKCDVTQAYSCDVTEDPLKYEVSFNCTICSEEFVHEHAYNEHMIMHLQNCDGGDTPRVREPQENCSDSIHSTNKRSAMKLEDELDQSTHSQHTFVTPFHMSSSTGETYEGSDQIEPGEHPSTNLHDRLFECEFTPSSILDCSLETDDMDKPFSCHLCDTKFTLNSSLVRHMKSHTGEEPFSCNLCDMKFTSASALVKHNVNMHKSDKLIGCNICDAKFTSNSSLVRHIRSHTGDKPFTCNLCDAKFTQNSSLLAHKKNHAGVKPYKCDLCESRFSKNSSLIRHMITHTGEKPFYCTLCDGKFTQNSALKRHMDTHTGQKAVSCNICGSKFTQNSSLVRHMRTHTGEKPFSCSICDAKFSLNSALKKHVKSHENEKECYCELCNQVFPNKKDLLDHIRTHTGERPLSCNICNDIFINNEDLKKHMRTHNVVKKYFCDECNHQFPSKRNLTIHKRVHSGEKPFTCNICDTTFTQNCNLVRHLRTHSGERPYACVLCHQKFANNSNLVSHMKVHTDEKPASCEYCPYRTKHANALVQHLRIHTGEKPYSCDECGYKCTQRGTLLAHFKTHTGEKPFICDLCGYKCALKTALVNHRRTHTGEKPYNCNLCDFKCAVKSNLLRHMKTHGG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01021504;
90% Identity: iTF_01021504;
80% Identity: iTF_01021504;