Mmin026365.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mycalesis mineus
Gene Symbol
-
Assembly
GCA_034621355.1
Location
JAXAVZ010000334.1:195014-200828[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.0013 0.088 14.0 1.7 1 23 117 139 117 139 0.97
2 18 1.3e-05 0.00088 20.3 3.6 1 23 245 267 245 267 0.98
3 18 0.00034 0.024 15.8 0.3 1 20 273 292 273 296 0.90
4 18 3.4e-06 0.00023 22.1 0.7 3 23 304 324 304 324 0.99
5 18 2.6e-05 0.0018 19.4 1.2 1 23 330 352 330 352 0.98
6 18 5.7e-06 0.0004 21.4 1.1 1 23 358 380 358 380 0.99
7 18 4.1e-06 0.00028 21.8 1.3 1 23 386 408 386 408 0.98
8 18 2.7e-07 1.8e-05 25.6 0.8 2 23 415 436 414 436 0.97
9 18 1.9e-05 0.0013 19.8 0.7 1 23 442 464 442 464 0.98
10 18 1.9e-05 0.0013 19.8 1.5 2 23 471 492 470 492 0.96
11 18 1.3e-05 0.00089 20.3 0.5 2 23 499 520 498 520 0.97
12 18 0.00011 0.0077 17.3 2.9 1 23 526 548 526 548 0.98
13 18 4.2e-07 2.9e-05 25.0 3.8 1 23 554 576 554 576 0.99
14 18 9.3e-06 0.00064 20.7 1.0 1 23 582 604 582 604 0.97
15 18 0.00099 0.069 14.3 0.7 2 23 611 632 611 632 0.97
16 18 0.00014 0.0098 17.0 2.5 1 23 638 660 638 660 0.98
17 18 0.0012 0.081 14.1 1.3 1 23 666 688 666 688 0.98
18 18 4.8e-05 0.0033 18.5 3.3 1 23 694 716 694 716 0.98

Sequence Information

Coding Sequence
ATGGAGCTCGTTGAGAGACATAACCTAATATCAAGACAACACGTTGAAGCAATAAGCCAAGCGAAAAAAGATCTCAACCACAATCTAGTGACCACACACTTCGGCCCCAACCACTGTGACCTGCACGTAGTCGACCACCAGGACAAacacacagacaaacaaacGGAATACACGATGGTCGAAATAGACATAGTCAAGAGCGAGAGGGCTGTGACGTCAGAGGAGGAAGACTCGGATGATAAACATTTCGACAACAGCATCATGGTGGAGCTGAAGCCCAGtaaatgtgacgtcacacagGCGTACAGCTGTGACGTCACGGAGGATCCCTTGAAGTACGAAGTGTCGTTCAATTGTACAATTTGTTCGGAGGAGTTCGTTCACGAGCACGCTTATAACGAGCATATGATTATGCACCTCCAGaactGTGACGGTGGTGACACTCCCAGAGTTCGAGAGCCCCAAGAGAACTGCAGCGACTCTATACACTCTACTAACAAGAGGAGTGCTATGAAGCTGGAAGATGAGCTTGATCAGTCGACACACTCGCAACACACATTTGttacccCATTTCATATGTCGTCATCAACTGGCGAAACATACGAGGGAAGTGATCAGATTGAACCTGGTGAACATCCTTCAACCAACCTACACGACAGACTGTTCGAATGCGAATTCACACCGAGCAGCATTCTAGATTGTTCTCTAGAAACCGACGACATGGACAAACCGTTCTCGTGTCATTTATGTGACACAAAATTCACTTTAAACAGCTCCCTCGTCAGGCATATGAAGTCACATACTGGTGAAGAACCTTTCTCCTGCAATTTGTGTGACATGAAATTCACAAGTGCCAGTGCTTTAGTGAAACATAATGTGAATATGCATAAAAGTGATAAACTCATCGGCTGTAACATTTGTGACGCGAAGTTCACGTCCAATAGCTCGCTGGTCAGGCACATCAGAAGTCATACTGGTGACAAACCTTTCACTTGCAATCTATGTGACGCTAAATTCACACAAAACAGTTCTTTATTAGCGCATAAAAAGAACCACGCCGGCGTCAAACCTTATAAATGTGACTTGTGCGAGTCGAGGTTTTCCAAAAACAGTTCGCTTATACGACATATGATAACACACACTGGTGAAAAACCTTTTTACTGTACTTTGTGTGatggaaagtttactcaaaataGTGCTCTAAAAAGACATATGGACACGCACACTGGTCAGAAAGCTGTCAGTTGTAACATATGCGGATCAAAGTTCACACAAAACAGCTCGCTCGTCAGACATATGAGGACACATACTGGTGAAAAACCCTTTTCTTGCAGCATATGTGACGCGAAGTTCTCACTGAACAGTGCATTAAAAAAACACGTGAAATCGCATGAAAACGAAAAGGAATGTTACTGCGAGTTGTGCAACCAAGTGTTTCCAAATAAAAAGGATTTGCTGGATCACATACGAACACACACCGGTGAAAGACCTTTATCGTGTAACATATGTAACGATATATTCATAAACAAcgaagatttaaaaaaacacatgaGAACCCATAacgttgttaaaaaatatttttgcgacGAATGCAACCACCAGTTCCCTTCAAAACGAAATTTAACAATCCACAAACGGGTACACTCTGGTGAAAAACCGTTTACATGTAACATATGTGATACGACGTTTACACAGAATTGCAACCTGGTGAGACACCTCCGTACACATTCTGGTGAACGACCCTATGCTTGCGTGTTGTGTCATCAGAAATTCGCAAACAACAGTAATCTGGTCAGCCATATGAAGGTACACACTGATGAGAAGCCTGCGTCTTGCGAATACTGTCCATATAGAACGAAGCACGCCAACGCATTGGTTCAGCATTTGAGAATACATACTGGTGAGAAACCCTACTCCTGCGACGAGTGTGGGTACAAATGCACACAAAGGGGAACTTTGCTCGCACACTTCAAGACACACACTGGTGAGAAACCCTTCATCTGCGACTTGTGCGGTTATAAATGTGCGCTAAAAACTGCACTAGTGAACCACAGGAGAACacatactggtgaaaagcccTATAACTGCAATTTGTGTGACTTTAAATGTGCTGTCAAAAGTAATTTGTTAAGACACATGAAAACGCATGGAGGttga
Protein Sequence
MELVERHNLISRQHVEAISQAKKDLNHNLVTTHFGPNHCDLHVVDHQDKHTDKQTEYTMVEIDIVKSERAVTSEEEDSDDKHFDNSIMVELKPSKCDVTQAYSCDVTEDPLKYEVSFNCTICSEEFVHEHAYNEHMIMHLQNCDGGDTPRVREPQENCSDSIHSTNKRSAMKLEDELDQSTHSQHTFVTPFHMSSSTGETYEGSDQIEPGEHPSTNLHDRLFECEFTPSSILDCSLETDDMDKPFSCHLCDTKFTLNSSLVRHMKSHTGEEPFSCNLCDMKFTSASALVKHNVNMHKSDKLIGCNICDAKFTSNSSLVRHIRSHTGDKPFTCNLCDAKFTQNSSLLAHKKNHAGVKPYKCDLCESRFSKNSSLIRHMITHTGEKPFYCTLCDGKFTQNSALKRHMDTHTGQKAVSCNICGSKFTQNSSLVRHMRTHTGEKPFSCSICDAKFSLNSALKKHVKSHENEKECYCELCNQVFPNKKDLLDHIRTHTGERPLSCNICNDIFINNEDLKKHMRTHNVVKKYFCDECNHQFPSKRNLTIHKRVHSGEKPFTCNICDTTFTQNCNLVRHLRTHSGERPYACVLCHQKFANNSNLVSHMKVHTDEKPASCEYCPYRTKHANALVQHLRIHTGEKPYSCDECGYKCTQRGTLLAHFKTHTGEKPFICDLCGYKCALKTALVNHRRTHTGEKPYNCNLCDFKCAVKSNLLRHMKTHGG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01021888;
90% Identity
iTF_01021888;
80% Identity
iTF_01021888;