Basic Information

Insect: Mycalesis mineus
Gene Symbol: RREB1
Assembly: GCA_034621355.1
Location: CM067882.1:16498717-16508486[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.81 56 5.2 1.2 1 23 77 100 77 100 0.93

2 12 3.7 2.6e+02 3.1 0.4 1 21 134 154 134 155 0.82

3 12 0.026 1.8 9.9 0.1 1 23 282 304 282 304 0.97

4 12 0.0014 0.096 13.9 0.4 1 23 313 335 313 335 0.99

5 12 0.00086 0.059 14.5 2.0 1 23 341 364 341 364 0.97

6 12 0.0035 0.24 12.6 1.6 1 23 712 735 712 735 0.96

7 12 0.00029 0.02 16.0 1.3 2 23 925 946 924 946 0.97

8 12 0.03 2 9.7 5.3 1 23 952 975 952 975 0.97

9 12 0.16 11 7.4 1.4 1 23 1004 1028 1004 1028 0.90

10 12 1.1 73 4.8 0.1 1 19 1051 1069 1051 1074 0.78

11 12 0.0021 0.15 13.3 0.2 2 23 1114 1135 1113 1135 0.96

12 12 0.018 1.3 10.4 4.9 1 23 1141 1163 1141 1163 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.81	56	5.2	1.2	1	23	77	100	77	100	0.93
2	12	3.7	2.6e+02	3.1	0.4	1	21	134	154	134	155	0.82
3	12	0.026	1.8	9.9	0.1	1	23	282	304	282	304	0.97
4	12	0.0014	0.096	13.9	0.4	1	23	313	335	313	335	0.99
5	12	0.00086	0.059	14.5	2.0	1	23	341	364	341	364	0.97
6	12	0.0035	0.24	12.6	1.6	1	23	712	735	712	735	0.96
7	12	0.00029	0.02	16.0	1.3	2	23	925	946	924	946	0.97
8	12	0.03	2	9.7	5.3	1	23	952	975	952	975	0.97
9	12	0.16	11	7.4	1.4	1	23	1004	1028	1004	1028	0.90
10	12	1.1	73	4.8	0.1	1	19	1051	1069	1051	1074	0.78
11	12	0.0021	0.15	13.3	0.2	2	23	1114	1135	1113	1135	0.96
12	12	0.018	1.3	10.4	4.9	1	23	1141	1163	1141	1163	0.97

Sequence Information

Coding Sequence: ATGCGATGCCATGTCATATCCGAAATCAAAACAGAGGACATCAGCGAGGCCAAAGTTGATACAGATCAAGAAGACATGAAGATCGAACAGACGCGTGCGACGCGCACTACGAGTATCGACAGTGATAATCGCTCAGACAGGAGCGATGAGGAAGACTGCAGAAGAGCCAGGAAAAGAGCGGCTTCAACATCCCCGTCTCCGATCCCATTGGACAAGAGGACAGCGCGATTCGAGTGCTCCAAATGCTTTCAGCGCTTTGACTCTATCAATGCCTTCGATCTCCACCGATTCACGGCGCACGGTGACGACAACAGGACTGGGTTCGACGATTACATCGATTACTCTGGCAAAAAGTACCGAGACATACACAGTCCCCATATCTCAATATCGGAACAACGGTTTCGTTGTGAACACTGTTTGCGTGACTTCCCATCGGGACAAATATTGAATATACATAGAAAAACATGCACTGCAGCTACAAGAATATCCAGTCCGGATCGCGATCGCAGAGACGACTTCTTCGCGAAGCTTGATCTTAGAAATAGGCCCATGGGTATTCCTGGTACCTTGACCCCTCCGATGGATCGCTTTACGCCAAAGTTTGACGATGGGCACCTCTCAAACGGAATAAGACACATCGACGCCGCGAGAGATTTAGCTGACATACAATCTATTTTAAACGTTACATCCGCTGGGAGTCTCTTAGAAAGATTAACAGGAACAAGAGTAGCGCTAGAAGGTGCGGTTTTAACTCCACCCGATACTGTGATGAAAGATCGTGATCAAGAAGAAACTCAGGATAATTTTGCGGCAGAGTTTAGGCGTATGAAACTGCGCGGTGAGTTTCCATGTAGGCTTTGTCCCGCTAAATTTCCAAATCTTAGAGCGTTAAAGGGACACAATAGAGTACATCTTAGTGGTACTGGACCTGGTCCTTACCAGTGCAACATGTGTCCCCATGCATCGTTGGATAAAGCTGCTTTGGTAAGGCATATGCGCACACACAATGGAGACAGACCGTACGAATGCGCGGTGTGCAACTATGCATTTACTACAAAAGCAAATTGTGAACGTCATTTACGCAACAGGCACGCTAAAATCACGAGAGAAGATGTCAAACGCTCAATTATTTATCATCCATCAGAGGATCCAAACAATGATGAAGTGAACTCCAAACTTGCGCGTGAAGAAGTCAAAAGATCGCTGGCTTTCCACACACCACCTGAGATTGAACGACGAAGTGAACCTACCGGCCGGAATACGCCATTGACTCATTACACTCCTACTTTTATAACTGATCGACATCCAGTTACAGCTCTTACGAAAGCTTTACCCGACTCACCTACTTTAACAGCTAGAGAGGTTGAAAATCCCATGCCCAGAATAAAAGTAAAAGGTATCGGGCAACTTACGCAGATACCGGAGTACCGGCCTCCCGAAGTGACTTTTAAGCCAAATGATATTCCTTTGGAAAATTATAACGAAGAAGCTCCAGTAGACCTTAGCACAAGTGATAACAACAGTTGTGATGTCTTAGATCTTAGTAAGAAAAAGCGTGATACGGATGATGATGAGCCAAAACCTCCGCCGCGCCCGGCTTTCGATAGCACTGCTGCTGCCACTGCGGCGGCTTCAGCGTTTGAAAAAACAAGACTACTATTAGCTCAACAAAGACTTTTCGAATCCTCTCTGCCTAAAATCGATCCTGCATACTATGCAACTCAACTATCTCAACTTTATGCCAGTTCTGTACCTGGGCTACCAGGTTTGCCATTGCCGCCTTCTTTCCCTATAAACCCTTATTTTCTTCAAACTTCTTTTTTTCCCCACCCAACTGATTCTCAAGAAATAGCTGAAATAAAGCAACGGATACAAAAGGAAATTATCCGTGGTTTAAGTATGTCCGGTGGAAGAATTGTGACCAACGAACCCGAAACTCAACCAAAACAAGAGCCCGAAGACGAGGACCAAAAGCCTATTCAAGTCGATACATCCCCAACTCCACCGCCCCGCCCTGAATCTCCACGTCCTTTAAACAACAATGTGCCTCAAAATGATTCTGTGAAAATGGTTATAAAAAACGGTGTTCTTATGCCGAAGCAGAAACAAAGGCGGTATCGCACTGAACGTCCTTTTTCTTGCTCCCAGTGTTCGGCGAGATTCACGTTAAGATCTAACATGGAGCGCCATGTAAAACAACAACACCCTCAGCACTGGAGCGTCAGACGACCAACACCGAGAGCGCCTCCACCCTACCCTTCGAATGACACTTTAGCTGATAGAGTAAAATACGCCTTATTGGCTCGGCATTTAGAAAGACCTCTACAATCTGATCGGTCTCCAATCAGAAGGGACTCAGACGAAGTTGCCGATAACGAGGAAGATGAAGAAGATGCGTTAGTGATCGACGAGGAACCTGAAGATAGAAAACCTGAAGATAACACAGCCGCCCATCGGGCTGCGGCAGAAATTCTAATGGCATCGCGTCAACAAGAACTTAACAAAGATTTCGATCTTAAAATTGCAGGAAATCTCATAAATAAACCGATACCAATCACCACCGAGAAAACAGATACGGAGACAGATGCTCCTAATCAAGAGCCTCTCCTTGTTGTGCCTACACGTAGCGATGAAGAAGAGGACGAGGAAGGCTTGGTTGCGTCAACTAGCGAGGGAAATAACTCCGGAAGCGATGAGAATAAGTCAGAGTCCGACACGGGAACGCAACCACCGAAAAAGAAATCCGCGTACAGCCTAGCGCCCAACAGAGTCTCCTGTCCTTACTGCCACCGTAAATTCCCTTGGTCCTCATCGCTCCGAAGGCATGTCCTCACCCACACCGGTCAAAAGCCCTTCAAATGTCCCCACTGCCCCCTTCTATTTACAACGAAATCCAACTGCGACCGCCACCTGTTGAGGAAACACGGGGGATCTGCCAAAGCCATATTAGCGGAGCCCATTCAAGACATCAACCCACCGCAGAATGACAGATCAGTGCCCGATCGGCCATTCAAATGCGCGTCATGCCCCACCAGCACGTTTTCTTCAATGGACACATTGAAAAAGCACATGTCCTCGCGACACGCGGCAGGAGATTCACAACCGAGCTCCCCAAACCCAGAAATTGATGACGCCGATGCAAGTTTGGTCTTCAAGTGTCATTTGTGCGAAGCGTCTTTTGGGGACAGAAATGGCGCGTTGGGCCACTTGGCGGCAACACATTCTGCTGAATACGAGCAGTTAGTGAGCAAGGGTGCTCTGGACGTGGCCAGCGACCGCAGTGAGAGCGCGGATGATGACGAGCGAGGGAAGTTTCCGGATCACGCCAACAGAAAGGTCGTTTGCGCCTTCTGCGTCCGCCGCTTCTGGTCGGCCGAGGACTTGCGTCGGCACATGCGGACGCACTCCGGCGAGCGTCCGTTCGCGTGCGACCTGTGCAGTCGACGCTTCACGCTCAAGCACAGCATGCTGCGGCACAGGAAGAAGCACAGGGAAGACACAGATGACGAGGAGTCTTCGCCGAGGGACGACGCTAACACTAATGGATACTGCTATCAAGAAGACGATTCCGGCAACGAGATCCCGAACAACGTAAACAACAACAACTCCCCCCCTGCGGCGCCATACGACAAGGAACTCAAACTGCAGATGACGTCACGCAAATACTCCTCCGAGGCTGAAAACGACACTGAGAACGGCGGAGACCTCATCGGAAAGCTTCTCGGCATCCCCGACAAGACTATCATTAACAAGCTTCTGTCGTCTGCAGACGAAGCGGCCAAGTTCCTCGGGGTGAACAAATGA
Protein Sequence: MRCHVISEIKTEDISEAKVDTDQEDMKIEQTRATRTTSIDSDNRSDRSDEEDCRRARKRAASTSPSPIPLDKRTARFECSKCFQRFDSINAFDLHRFTAHGDDNRTGFDDYIDYSGKKYRDIHSPHISISEQRFRCEHCLRDFPSGQILNIHRKTCTAATRISSPDRDRRDDFFAKLDLRNRPMGIPGTLTPPMDRFTPKFDDGHLSNGIRHIDAARDLADIQSILNVTSAGSLLERLTGTRVALEGAVLTPPDTVMKDRDQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKITREDVKRSIIYHPSEDPNNDEVNSKLAREEVKRSLAFHTPPEIERRSEPTGRNTPLTHYTPTFITDRHPVTALTKALPDSPTLTAREVENPMPRIKVKGIGQLTQIPEYRPPEVTFKPNDIPLENYNEEAPVDLSTSDNNSCDVLDLSKKKRDTDDDEPKPPPRPAFDSTAAATAAASAFEKTRLLLAQQRLFESSLPKIDPAYYATQLSQLYASSVPGLPGLPLPPSFPINPYFLQTSFFPHPTDSQEIAEIKQRIQKEIIRGLSMSGGRIVTNEPETQPKQEPEDEDQKPIQVDTSPTPPPRPESPRPLNNNVPQNDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPTPRAPPPYPSNDTLADRVKYALLARHLERPLQSDRSPIRRDSDEVADNEEDEEDALVIDEEPEDRKPEDNTAAHRAAAEILMASRQQELNKDFDLKIAGNLINKPIPITTEKTDTETDAPNQEPLLVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDTGTQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSAKAILAEPIQDINPPQNDRSVPDRPFKCASCPTSTFSSMDTLKKHMSSRHAAGDSQPSSPNPEIDDADASLVFKCHLCEASFGDRNGALGHLAATHSAEYEQLVSKGALDVASDRSESADDDERGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCSRRFTLKHSMLRHRKKHREDTDDEESSPRDDANTNGYCYQEDDSGNEIPNNVNNNNSPPAAPYDKELKLQMTSRKYSSEAENDTENGGDLIGKLLGIPDKTIINKLLSSADEAAKFLGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00986645;
90% Identity: iTF_00205572;
80% Identity: -