Basic Information

Insect: Bicyclus anynana
Gene Symbol: RREB1
Assembly: GCA_947172395.1
Location: OX359206.1:14574392-14596601[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.8 43 5.0 1.1 1 23 91 114 91 114 0.93

2 12 3.2 1.8e+02 3.1 0.4 1 21 148 168 148 169 0.82

3 12 0.023 1.2 9.9 0.1 1 23 296 318 296 318 0.97

4 12 0.0012 0.066 13.9 0.4 1 23 327 349 327 349 0.99

5 12 0.00075 0.041 14.5 2.0 1 23 355 378 355 378 0.97

6 12 0.003 0.16 12.6 1.6 1 23 724 747 724 747 0.96

7 12 0.00025 0.014 16.0 1.3 2 23 939 960 938 960 0.97

8 12 0.026 1.4 9.7 5.3 1 23 966 989 966 989 0.97

9 12 0.1 5.5 7.8 1.3 1 23 1018 1042 1018 1042 0.91

10 12 0.39 21 6.0 0.2 1 23 1065 1088 1065 1088 0.88

11 12 0.023 1.3 9.8 0.3 2 23 1128 1149 1127 1149 0.92

12 12 0.029 1.6 9.5 5.3 1 23 1155 1177 1155 1177 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.8	43	5.0	1.1	1	23	91	114	91	114	0.93
2	12	3.2	1.8e+02	3.1	0.4	1	21	148	168	148	169	0.82
3	12	0.023	1.2	9.9	0.1	1	23	296	318	296	318	0.97
4	12	0.0012	0.066	13.9	0.4	1	23	327	349	327	349	0.99
5	12	0.00075	0.041	14.5	2.0	1	23	355	378	355	378	0.97
6	12	0.003	0.16	12.6	1.6	1	23	724	747	724	747	0.96
7	12	0.00025	0.014	16.0	1.3	2	23	939	960	938	960	0.97
8	12	0.026	1.4	9.7	5.3	1	23	966	989	966	989	0.97
9	12	0.1	5.5	7.8	1.3	1	23	1018	1042	1018	1042	0.91
10	12	0.39	21	6.0	0.2	1	23	1065	1088	1065	1088	0.88
11	12	0.023	1.3	9.8	0.3	2	23	1128	1149	1127	1149	0.92
12	12	0.029	1.6	9.5	5.3	1	23	1155	1177	1155	1177	0.97

Sequence Information

Coding Sequence: ATGCAGGGAGCCGCCACTGCGCCTGCGCCCCCCGCGGCCGAGCCGCCTACGTCACAACAAATCAAAACAGAGGATATCAGCGAGGCCAAAGTTGACACCGATCAAGAAGACATGAAGATCGAACACCACGAGACGCGAGCGACGCGGACGACGAGTATCGACAGCGATAATCGCTCGGATAGAAGCGATGAGGAAGACTGTAGAAGAGCGAGGAAAAGAGCGGCGTCAACGTCCCCGTCTCCAATACCGTTGGACAAGAGGACAGCGCGATTCGAGTGTCAGAAATGCTATCAGCGCTTTGACTCTATTAACGCCTTCGATCTCCATCGATTCACGGCGCACAGTGACGACAACAGAACCGGTTTCGATGACTACATCGATTATTCTGGAAAGAAGTATCGAGATATACACAGTCCCCATATCTCAATATCGGAACAACGGTTCCGTTGCGAACACTGTTTGCGCGACTTCCCGTCGGGACAAATACTGAATATCCACAGGAAAACATGCACTGCGGCTACCAGAATATCCAGCCCGGATCGCGATCGCAGAGACGATTTCTTCGCGAAACTTGATCTTAGAAATAGACCATTAGGTATCCCTGGTACCTTGACCCCACCGATGGATCGCTTTACGCCAAAGTTCGATGACGGGCATCTTTCTAACGGTATAAGACACATCGATGCAGCGCGAGATTTAGCTGACATACAGTCTATTCTAAATGTTACATCCGCTGGCAGCCTCTTAGAAAGATTAACAGGAACTAGAGTAGCCCTTGAAAGTGCGGTATTAACTCCACCCGATACTGTAATTAAAGATCGTGATCAAGAAGAAACTCAAGATAATTTTGCAGCTGAATTCAGGCGTATGAAACTGCGTGGTGAGTTTCCATGTAGGCTTTGTCCTGCTAAATTTCCAAACCTAAGAGCCTTAAAAGGACACAACAGAGTACATCTAAGCGGCACTGGACCTGGGCCTTATCAGTGCAACATGTGTCCTCATGCATCTTTAGATAAAGCAGCTTTGGTAAGGCATATGCGCACACATAATGGAGACAGACCGTACGAATGCGCTGTGTGCAACTATGCATTTACTACAAAAGCAAATTGTGAACGTCATTTACGCAACAGGCACGCCAAAATCACGAGAGAAGACGTCAAACGTTCAATTATTTATCATCCATCAGAGGATCCAAACAATGATGAAGTGAACTCTAAACTTGCACGAGAAGAAGTCAAAAGATCGCTGGCCTTCCACACACCTGAGATCGAAAGACGTAGTGAACCTACAGGTCGGAATACACCATTGACTCATTACACTCCCACTTTCATAACTGATAGACATCCAGTAACAGCTCTCACAAAAGCTTTGCCCGATTCACCTACATTAACAGCTAGAGAAGGCGAAAATCCCATGCCCAGAATAAAGGTAAAAGGTATAGGGCAACTTACGCAAATACCGGAGTACCGTCCTCCTGAAGTAGCTTTTAAGCCTAATGATATTCCCCTGGAAAATTACAACGAAGCTCCAGTAGATCTCAGCACAAGTGATAACAACAGTTGTGATGTTTTAGATCTTAGTAAGAAAAAGCGTGACACGGATGATGATGAACCAAAACCTCCCCCACGCCCAACTTTCGATAGTACAGCTGCTGCCACTGCGGCTGCTTCGGCGTTCGAAAAAACAAGATTACTACTAGCTCAACAAAGACTTTTCGAATCCTCTCTACCTAAAATCGATCCTGCATACTATGCAACTCAACTATCTCAACTTTATGCCAGTTCTGTACCTGGGCTACCAGGTTTGCCATTGCCACCTTCTTTCCCTATCAATCCTTATTTTCTTCAAACATCTTTTTTTCCCCACCCAACTGACTCTCAAGAAATAGCGGAAATAAAGCAACGGATACAGAAGGAAATAATCCGTGGTCTAAGTATGTCCGGTGGCAGAATCGTGACAAATGAACCCGAAACTCAGCCAAAACAAGAGCCAGAAGACGAGGATCAAAAACCTATTCAAGTTGATACATGTCCGACTCCGCCGCCGCGCCCTGAATCTCCACGCCCTTTAAACAACAACGTGCCTCAAAATGATTCTGTAAAAATGGTGATAAAGAACGGTGTGCTTATGCCAAAACAGAAACAAAGGCGTTATCGCACTGAACGACCATTTTCTTGCTCCCAGTGTTCGGCGAGATTTACATTAAGATCTAACATGGAGCGCCATGTAAAACAGCAGCACCCTCAACACTGGAGCGTCAGACGACCAACGCCGAGAGCTCCTCCACCTTATCCTTCATCTGATACTTTAGCTGACAGAGTGAAGTATGCATTATTGGCTCGTCATTTAGAAAGACCTTTACAGTCCGATCGCTCTCCAGTCAGGAGAGACTCAGATGAAGTTGCCGATAATGAAGAAGATGAAGACGATGCATTAGTTATAGACGAGGAACCAGAAGATAGGAAACCTGAAGATAATACGGCCGCCCATCGTGCTGCAGCAGAAATTCTCATGGCGTCACGCCAACAGGAACTCAACAAAGATTTTGATCTTAAAATCGCAGGAAATCTTATAAACAAACCGATTCCTATCACAGCTGAGAAAGCAGATACTGAGACAGTTTCTGTCTCGAATCAAGAACCCCTACTATCTGTTGTGCCTACGCGTAGCGATGAGGAAGAAGACGAGGAAGGCTTGGTCGCCTCAACTAGCGAGGGAAATAACTCCGGAAGCGATGAAAATAAGTCAGAGTCCGACACGGGTACCCAGCCACCGAAAAAGAAGTCCGCTTACAGTTTAGCACCAAACCGAGTCTCCTGTCCATACTGCCACCGCAAATTCCCTTGGTCCTCCTCCCTTCGGAGACACGTCCTCACGCACACCGGCCAAAAGCCTTTCAAGTGTCCCCACTGTCCCCTTCTCTTTACCACCAAATCCAACTGCGACCGCCACTTATTGAGGAAACACGGGGGATCTGCCAAAGCGATATTAGCGGAGCCCATTCAAGATATCAATCCGCCTCAGAATGACAGATCAGTGCCCGATCGGCCTTACAAATGCGCGTCATGCCCCACAAGCACTTTCTCGTCAATGGATACATTGAAGAAGCATATGTCCTCGCGTCATGCGGTGGGAGATTCACAGCCTTGCTCCCCGAATCCAGAAATTGATGATACTGATGCCAGTTTGGTTTTCAAGTGCCATTTGTGCGAAGCTTCCTTTGGGGACAGGACGGGCGCGTTGGGGCATTTGTCGTCGGCGCATTCTGCTGAGTACGAGCAGTTAGTGAGCAAGGGTGCTCTGGACGTGGCGAGCGACCGCAGCGAAAGCGCCGATGATGATGAACGGGGGAAGTTTCCAGATCACGCTAATAGAAAGGTCGTATGCGCTTTCTGCATCCGTCGCTTCTGGTCGGCCGAGGACTTGCGTCGTCACATGCGGACGCACTCGGGCGAGCGTCCATTCGCCTGCGACCTGTGCAGACGCCGGTTCACGCTGAAGCACAGCATGCTCCGGCACAGGAAGAAGCACAGGGAAGACACAGATGACGAGGAATCCTCACCGAGGGACGACGCTAACACTAATGGATACTGCTATCAAGAAGACGACTCCGGCAACGAGATCCCAACCAACGTAAACAACAACAACTCGCCCCCAGCGGCACCTTACGACAAGAAACTGAAACTCCAGATGACGTCACGCAAATACTCCTCAGAGGCTGAAAACGACGCCGAAAATGGCGGGGACCTCATCGGAAAGCTCCTCGGCATCCCAGACAAGACTATCATCAACAAGCTCCTGTCCTCCGCGGACGAGGCGGCCAAGTTCCTCGGGGTGAAGAAATGA
Protein Sequence: MQGAATAPAPPAAEPPTSQQIKTEDISEAKVDTDQEDMKIEHHETRATRTTSIDSDNRSDRSDEEDCRRARKRAASTSPSPIPLDKRTARFECQKCYQRFDSINAFDLHRFTAHSDDNRTGFDDYIDYSGKKYRDIHSPHISISEQRFRCEHCLRDFPSGQILNIHRKTCTAATRISSPDRDRRDDFFAKLDLRNRPLGIPGTLTPPMDRFTPKFDDGHLSNGIRHIDAARDLADIQSILNVTSAGSLLERLTGTRVALESAVLTPPDTVIKDRDQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKITREDVKRSIIYHPSEDPNNDEVNSKLAREEVKRSLAFHTPEIERRSEPTGRNTPLTHYTPTFITDRHPVTALTKALPDSPTLTAREGENPMPRIKVKGIGQLTQIPEYRPPEVAFKPNDIPLENYNEAPVDLSTSDNNSCDVLDLSKKKRDTDDDEPKPPPRPTFDSTAAATAAASAFEKTRLLLAQQRLFESSLPKIDPAYYATQLSQLYASSVPGLPGLPLPPSFPINPYFLQTSFFPHPTDSQEIAEIKQRIQKEIIRGLSMSGGRIVTNEPETQPKQEPEDEDQKPIQVDTCPTPPPRPESPRPLNNNVPQNDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPTPRAPPPYPSSDTLADRVKYALLARHLERPLQSDRSPVRRDSDEVADNEEDEDDALVIDEEPEDRKPEDNTAAHRAAAEILMASRQQELNKDFDLKIAGNLINKPIPITAEKADTETVSVSNQEPLLSVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDTGTQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSAKAILAEPIQDINPPQNDRSVPDRPYKCASCPTSTFSSMDTLKKHMSSRHAVGDSQPCSPNPEIDDTDASLVFKCHLCEASFGDRTGALGHLSSAHSAEYEQLVSKGALDVASDRSESADDDERGKFPDHANRKVVCAFCIRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREDTDDEESSPRDDANTNGYCYQEDDSGNEIPTNVNNNNSPPAAPYDKKLKLQMTSRKYSSEAENDAENGGDLIGKLLGIPDKTIINKLLSSADEAAKFLGVKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00986645;
90% Identity: iTF_01021718;
80% Identity: -