Mmin022900.1
Basic Information
- Insect
- Mycalesis mineus
- Gene Symbol
- bab1
- Assembly
- GCA_034621355.1
- Location
- CM067908.1:3685676-3690210[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.7e-17 1.6e-14 54.0 0.0 1 43 28 71 28 73 0.95 2 3 7.9 4.6e+03 -1.9 1.6 6 15 167 176 163 178 0.83 3 3 6.4 3.7e+03 -1.6 0.0 10 18 283 292 278 293 0.63
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACACCAACCAAAGCATCGTTCACAACCTGAGGTTCCGCGAGCGCGGGCCGCTGAAGTCCTGGCGCCCGGAGACCATGGCCGAAGCCATCTTCTCCGTTCTGAAGGAGGGGCTCTCACTGTCGCAGGCTGCCCGCAAATACGACATTCCGTACCCGACGTTTGTGCTGTACGCCAACAGGGTCCACAACATGCTGGGCCCGAGCGCAGATGGTGGCGCAGATTTGAGACCCAAAGGTCGCGGGCGGCCGCAGCGCATCCTGCTGGGCGTGTGGCCCGACGAGCACATCCGCGGCGTCATCCGTGCCGTGGTGTTCCGCGACTCGCATGCCGCGCACGCCGTGCACGCTTCGCACCACATCAAGGAGGAAGTGCTACCCGTCTACCCTGCGATCACGGACGGTATGACCCCGGTACAGAACGCTTACCCGGTGCCATGCGGCAACGGGCGCGAAGGCGGCGTGTCGCCCAACGCTGCGGCCGCCGCCGCCGTGGCCGCCGTGGCGCACGGGCTGCGCCGCCAGATGTGCAATATGGTGGTGGCCGCGCAGAGGCCGTCCGACCACCCCGTGCACCTCGGCCTGCCCCCGATGCCCATGCAGTCCCCGCGCTTGCCGTCGCCACGTCTGCCCTCGCCGCGTCTGCCTTCGCCGCTCACGGCCGGGCTGGAGTCTCCGCTGTGCTCGCCGCCGCCGCCGGGCCACGCCCTAGAGCCCCCAAAGCCCACCGACCCATTCCGACCCTTCGCCTCGCCACGTCCTGACAGCCGCTACAGCGACCGCGACGTTGTCGCCGACATAACTGACATGGGACCGCCTAAAACTCCGATTTCGATGGTGAAGAACGGCAAGGAGATGTCGCTCCCGGTGAAGATGGAGCTGCCGCCGGCGGAGGCGCGCGCTGAGAACATCTGA
- Protein Sequence
- MWQKCWNTNQSIVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHAAHAVHASHHIKEEVLPVYPAITDGMTPVQNAYPVPCGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPSDHPVHLGLPPMPMQSPRLPSPRLPSPRLPSPLTAGLESPLCSPPPPGHALEPPKPTDPFRPFASPRPDSRYSDRDVVADITDMGPPKTPISMVKNGKEMSLPVKMELPPAEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01079819;
- 90% Identity
- iTF_00205046;
- 80% Identity
- -